RNA–Protein interactions for RNA: ENST00000471039.1

SCNM1-205, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-205ENST00000471039 LRRC37AA6NMS7 1700 aa15.88■□□□□ 0.13
SCNM1-205ENST00000471039 SBF1O95248 1867 aa15.87■□□□□ 0.13
SCNM1-205ENST00000471039 CCDC88AQ3V6T2 1871 aa15.87■□□□□ 0.13
SCNM1-205ENST00000471039 YBX3P16989 372 aaKnown RBP eCLIP15.87■□□□□ 0.131e-8■■■□□ 16.6
SCNM1-205ENST00000471039 FKBP5Q13451 457 aaPredicted RBP15.87■□□□□ 0.13
SCNM1-205ENST00000471039 PPP1R42Q7Z4L9 355 aa15.87■□□□□ 0.13
SCNM1-205ENST00000471039 PELP1Q8IZL8 1130 aaKnown RBP15.87■□□□□ 0.13
SCNM1-205ENST00000471039 ZNF428Q96B54 188 aa15.87■□□□□ 0.13
SCNM1-205ENST00000471039 MYD88Q99836 296 aa15.87■□□□□ 0.13
SCNM1-205ENST00000471039 MAP3K2Q9Y2U5 619 aa15.87■□□□□ 0.13
SCNM1-205ENST00000471039 TIAM2Q8IVF5 1701 aa15.86■□□□□ 0.13
SCNM1-205ENST00000471039 PI4KAP2A4QPH2 592 aa15.86■□□□□ 0.13
SCNM1-205ENST00000471039 ATP5J2-PTCD1G3V325 749 aa15.86■□□□□ 0.13
SCNM1-205ENST00000471039 CT47B1P0C2W7 299 aaPredicted RBP15.86■□□□□ 0.13
SCNM1-205ENST00000471039 PDE6BP35913 854 aa15.86■□□□□ 0.13
SCNM1-205ENST00000471039 ERFEQ4G0M1 354 aa15.86■□□□□ 0.13
SCNM1-205ENST00000471039 KSR2Q6VAB6 950 aa15.86■□□□□ 0.13
SCNM1-205ENST00000471039 C2CD5Q86YS7 1000 aa15.86■□□□□ 0.13
SCNM1-205ENST00000471039 PI4KAP1Q8N8J0 262 aa15.86■□□□□ 0.13
SCNM1-205ENST00000471039 METTL22Q9BUU2 404 aaPredicted RBP15.86■□□□□ 0.13
SCNM1-205ENST00000471039 GTF2E1P29083 439 aaPredicted RBP15.85■□□□□ 0.13
SCNM1-205ENST00000471039 GPR162Q16538 588 aa15.85■□□□□ 0.13
SCNM1-205ENST00000471039 UTP14AQ9BVJ6 771 aaKnown RBP15.85■□□□□ 0.13
SCNM1-205ENST00000471039 COL4A1P02462 1669 aa15.84■□□□□ 0.13
SCNM1-205ENST00000471039 ALDH1L2Q3SY69 923 aa15.84■□□□□ 0.13
SCNM1-205ENST00000471039 MRPL50Q8N5N7 158 aaKnown RBP15.84■□□□□ 0.13
SCNM1-205ENST00000471039 SSH1Q8WYL5 1049 aa15.84■□□□□ 0.13
SCNM1-205ENST00000471039 BCL2L13Q9BXK5 485 aa15.84■□□□□ 0.13
SCNM1-205ENST00000471039 PDZRN3Q9UPQ7 1066 aa15.84■□□□□ 0.13
SCNM1-205ENST00000471039 SH3TC1Q8TE82 1336 aa15.84■□□□□ 0.13
SCNM1-205ENST00000471039 DCAF8L1A6NGE4 600 aa15.83■□□□□ 0.12
SCNM1-205ENST00000471039 H0YIN7 160 aa15.83■□□□□ 0.12
SCNM1-205ENST00000471039 TRIM28Q13263 835 aaKnown RBP15.83■□□□□ 0.12
SCNM1-205ENST00000471039 DNAAF4Q8WXU2 420 aa15.83■□□□□ 0.12
SCNM1-205ENST00000471039 SMC4Q9NTJ3 1288 aa15.83■□□□□ 0.12
SCNM1-205ENST00000471039 PIM2Q9P1W9 311 aa15.83■□□□□ 0.12
SCNM1-205ENST00000471039 TRMT112Q9UI30 125 aaKnown RBP15.83■□□□□ 0.12
SCNM1-205ENST00000471039 BCS1LQ9Y276 419 aa15.83■□□□□ 0.12
SCNM1-205ENST00000471039 DICER1Q9UPY3 1922 aaKnown RBP15.83■□□□□ 0.12
SCNM1-205ENST00000471039 A0A1B0GUL6 1792 aa15.82■□□□□ 0.12
SCNM1-205ENST00000471039 KLRG2A4D1S0 409 aaPredicted RBP15.82■□□□□ 0.12
SCNM1-205ENST00000471039 IGKV5-2P06315 115 aa15.82■□□□□ 0.12
SCNM1-205ENST00000471039 SRGNP10124 158 aa15.82■□□□□ 0.12
SCNM1-205ENST00000471039 CRY2Q49AN0 593 aa15.82■□□□□ 0.12
SCNM1-205ENST00000471039 CCDC191Q8NCU4 936 aa15.82■□□□□ 0.12
SCNM1-205ENST00000471039 F6X3S4 739 aa15.81■□□□□ 0.12
SCNM1-205ENST00000471039 PTPRCP08575 1304 aa15.81■□□□□ 0.12
SCNM1-205ENST00000471039 NEXNQ0ZGT2 675 aa15.81■□□□□ 0.12
SCNM1-205ENST00000471039 CWF19L2Q2TBE0 894 aaKnown RBP15.81■□□□□ 0.12
SCNM1-205ENST00000471039 STYK1Q6J9G0 422 aa15.81■□□□□ 0.12
SCNM1-205ENST00000471039 C3orf67Q6ZVT6 689 aa15.81■□□□□ 0.12
SCNM1-205ENST00000471039 SYNE4Q8N205 404 aa15.81■□□□□ 0.12
SCNM1-205ENST00000471039 CWC25Q9NXE8 425 aaPredicted RBP15.81■□□□□ 0.12
SCNM1-205ENST00000471039 NEURL1BA8MQ27 555 aa15.8■□□□□ 0.12
SCNM1-205ENST00000471039 DALRD3Q5D0E6 543 aaKnown RBP15.8■□□□□ 0.12
SCNM1-205ENST00000471039 ZNF622Q969S3 477 aaKnown RBP eCLIP15.8■□□□□ 0.12
SCNM1-205ENST00000471039 MASTLQ96GX5 879 aa15.8■□□□□ 0.12
SCNM1-205ENST00000471039 LTBP1Q14766 1721 aa15.8■□□□□ 0.12
SCNM1-205ENST00000471039 NPR1P16066 1061 aa15.79■□□□□ 0.12
SCNM1-205ENST00000471039 RARSP54136 660 aaKnown RBP15.79■□□□□ 0.12
SCNM1-205ENST00000471039 SLC10A5Q5PT55 438 aa15.79■□□□□ 0.12
SCNM1-205ENST00000471039 TTLL6Q8N841 843 aa15.79■□□□□ 0.12
SCNM1-205ENST00000471039 ZBTB38Q8NAP3 1195 aaPredicted RBP15.79■□□□□ 0.12
SCNM1-205ENST00000471039 FAM89AQ96GI7 184 aa15.79■□□□□ 0.12
SCNM1-205ENST00000471039 KIF16BQ96L93 1317 aa15.78■□□□□ 0.12
SCNM1-205ENST00000471039 CDHR2Q9BYE9 1310 aa15.78■□□□□ 0.12
SCNM1-205ENST00000471039 GRIN3BO60391 1043 aa15.78■□□□□ 0.12
SCNM1-205ENST00000471039 PCCAP05165 728 aaPredicted RBP15.78■□□□□ 0.12
SCNM1-205ENST00000471039 HCLS1P14317 486 aaPredicted RBP15.78■□□□□ 0.12
SCNM1-205ENST00000471039 RTL5Q5HYW3 569 aaPredicted RBP15.78■□□□□ 0.12
SCNM1-205ENST00000471039 PRPF40BQ6NWY9 871 aaKnown RBP15.78■□□□□ 0.12
SCNM1-205ENST00000471039 LINS1Q8NG48 757 aa15.78■□□□□ 0.12
SCNM1-205ENST00000471039 SNED1Q8TER0 1413 aa15.77■□□□□ 0.12
SCNM1-205ENST00000471039 BRPF1P55201 1214 aaPredicted RBP15.77■□□□□ 0.12
SCNM1-205ENST00000471039 BEND3Q5T5X7 828 aa15.77■□□□□ 0.12
SCNM1-205ENST00000471039 RPGRQ92834 1020 aaKnown RBP15.77■□□□□ 0.12
SCNM1-205ENST00000471039 CNKSR1Q969H4 720 aa15.77■□□□□ 0.12
SCNM1-205ENST00000471039 NLRP3Q96P20 1036 aa15.77■□□□□ 0.12
SCNM1-205ENST00000471039 IRS4O14654 1257 aaPredicted RBP15.76■□□□□ 0.11
SCNM1-205ENST00000471039 GCKRQ14397 625 aa15.76■□□□□ 0.11
SCNM1-205ENST00000471039 ABCC4O15439 1325 aa15.75■□□□□ 0.11
SCNM1-205ENST00000471039 HOXA10P31260 410 aaPredicted RBP15.75■□□□□ 0.11
SCNM1-205ENST00000471039 SLC4A10Q6U841 1118 aa15.75■□□□□ 0.11
SCNM1-205ENST00000471039 DUOX1Q9NRD9 1551 aa15.75■□□□□ 0.11
SCNM1-205ENST00000471039 CASP7P55210 303 aa15.74■□□□□ 0.11
SCNM1-205ENST00000471039 UBE3BQ7Z3V4 1068 aa15.74■□□□□ 0.11
SCNM1-205ENST00000471039 JARID2Q92833 1246 aaPredicted RBP15.74■□□□□ 0.11
SCNM1-205ENST00000471039 ALDH1L1O75891 902 aa15.73■□□□□ 0.11
SCNM1-205ENST00000471039 RBM17Q96I25 401 aaKnown RBP15.73■□□□□ 0.11
SCNM1-205ENST00000471039 CRAMP1Q96RY5 1269 aa15.73■□□□□ 0.11
SCNM1-205ENST00000471039 SRCIN1Q9C0H9 1055 aa15.73■□□□□ 0.11
SCNM1-205ENST00000471039 NOB1Q9ULX3 412 aaKnown RBP15.73■□□□□ 0.11
SCNM1-205ENST00000471039 H7C1W4 665 aa15.72■□□□□ 0.11
SCNM1-205ENST00000471039 C21orf2O43822 256 aa15.72■□□□□ 0.11
SCNM1-205ENST00000471039 PDE8AO60658 829 aa15.72■□□□□ 0.11
SCNM1-205ENST00000471039 BCAR3O75815 825 aa15.72■□□□□ 0.11
SCNM1-205ENST00000471039 HSP90B1P14625 803 aaKnown RBP15.72■□□□□ 0.11
SCNM1-205ENST00000471039 ALDH1B1P30837 517 aa15.72■□□□□ 0.11
SCNM1-205ENST00000471039 RASSF7Q02833 373 aa15.72■□□□□ 0.11
SCNM1-205ENST00000471039 SF3B3Q15393 1217 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms