RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 NCBP1Q09161 790 aaKnown RBP13.41□□□□□ -0.26
SRGAP3-204ENST00000470951 RASEFQ8IZ41 740 aa13.41□□□□□ -0.26
SRGAP3-204ENST00000470951 SPC24Q8NBT2 197 aa13.41□□□□□ -0.26
SRGAP3-204ENST00000470951 BABAM1Q9NWV8 329 aa13.41□□□□□ -0.26
SRGAP3-204ENST00000470951 ADGRL3Q9HAR2 1447 aa13.41□□□□□ -0.26
SRGAP3-204ENST00000470951 FAM177BA6PVY3 158 aa13.41□□□□□ -0.26
SRGAP3-204ENST00000470951 CASTP20810 708 aaKnown RBP13.41□□□□□ -0.26
SRGAP3-204ENST00000470951 TYRO3Q06418 890 aa13.41□□□□□ -0.26
SRGAP3-204ENST00000470951 HSP90AB4PQ58FF6 505 aa13.41□□□□□ -0.26
SRGAP3-204ENST00000470951 RHPN1Q8TCX5 695 aa13.41□□□□□ -0.26
SRGAP3-204ENST00000470951 USP44Q9H0E7 712 aa13.41□□□□□ -0.26
SRGAP3-204ENST00000470951 TOPAZ1Q8N9V7 1692 aa13.41□□□□□ -0.26
SRGAP3-204ENST00000470951 TTC41PQ6P2S7 1318 aa13.4□□□□□ -0.26
SRGAP3-204ENST00000470951 TULP2O00295 520 aa13.4□□□□□ -0.26
SRGAP3-204ENST00000470951 PTGS1P23219 599 aa13.4□□□□□ -0.26
SRGAP3-204ENST00000470951 TMCO4Q5TGY1 634 aa13.4□□□□□ -0.26
SRGAP3-204ENST00000470951 ZSWIM6Q9HCJ5 1215 aa13.4□□□□□ -0.26
SRGAP3-204ENST00000470951 PDRG1Q9NUG6 133 aa13.4□□□□□ -0.26
SRGAP3-204ENST00000470951 CYP46A1Q9Y6A2 500 aa13.4□□□□□ -0.26
SRGAP3-204ENST00000470951 MRVI1Q9Y6F6 885 aa13.4□□□□□ -0.26
SRGAP3-204ENST00000470951 SPDYE4A6NLX3 237 aa13.4□□□□□ -0.26
SRGAP3-204ENST00000470951 CLSTN1O94985 981 aa13.4□□□□□ -0.26
SRGAP3-204ENST00000470951 RBM43Q6ZSC3 357 aaKnown RBP13.4□□□□□ -0.26
SRGAP3-204ENST00000470951 SLC26A8Q96RN1 970 aa13.4□□□□□ -0.26
SRGAP3-204ENST00000470951 TSPYL1Q9H0U9 437 aa13.4□□□□□ -0.26
SRGAP3-204ENST00000470951 DDX19AQ9NUU7 478 aaKnown RBP13.4□□□□□ -0.26
SRGAP3-204ENST00000470951 MIS18AQ9NYP9 233 aa13.4□□□□□ -0.26
SRGAP3-204ENST00000470951 CTNNA3Q9UI47 895 aa13.4□□□□□ -0.26
SRGAP3-204ENST00000470951 STRCQ7RTU9 1775 aa13.4□□□□□ -0.26
SRGAP3-204ENST00000470951 MAPK8IP2Q13387 824 aaPredicted RBP13.39□□□□□ -0.27
SRGAP3-204ENST00000470951 MTHFSDQ2M296 383 aaKnown RBP13.39□□□□□ -0.27
SRGAP3-204ENST00000470951 PLA2G4DQ86XP0 818 aa13.39□□□□□ -0.27
SRGAP3-204ENST00000470951 NUTM1Q86Y26 1132 aa13.39□□□□□ -0.27
SRGAP3-204ENST00000470951 CCDC83Q8IWF9 413 aa13.39□□□□□ -0.27
SRGAP3-204ENST00000470951 SCAND2PQ9GZW5 306 aaPredicted RBP13.39□□□□□ -0.27
SRGAP3-204ENST00000470951 IL1RAPL2Q9NP60 686 aa13.39□□□□□ -0.27
SRGAP3-204ENST00000470951 SURF6O75683 361 aaKnown RBP13.39□□□□□ -0.27
SRGAP3-204ENST00000470951 GLRX3O76003 335 aaKnown RBP13.39□□□□□ -0.27
SRGAP3-204ENST00000470951 APPP05067 770 aa13.39□□□□□ -0.27
SRGAP3-204ENST00000470951 CDC25BP30305 580 aa13.39□□□□□ -0.27
SRGAP3-204ENST00000470951 HDGFP51858 240 aaKnown RBP13.39□□□□□ -0.27
SRGAP3-204ENST00000470951 TDRD7Q8NHU6 1098 aaKnown RBP13.39□□□□□ -0.27
SRGAP3-204ENST00000470951 MAP3K19Q56UN5 1328 aa13.38□□□□□ -0.27
SRGAP3-204ENST00000470951 NPHP3Q7Z494 1330 aa13.38□□□□□ -0.27
SRGAP3-204ENST00000470951 NEMFO60524 1076 aa13.38□□□□□ -0.27
SRGAP3-204ENST00000470951 LARGE1O95461 756 aa13.38□□□□□ -0.27
SRGAP3-204ENST00000470951 ATXN8OSP0DMR3 200 aa13.38□□□□□ -0.27
SRGAP3-204ENST00000470951 ZNF75DP51815 510 aa13.38□□□□□ -0.27
SRGAP3-204ENST00000470951 HSP90AB2PQ58FF8 381 aa13.38□□□□□ -0.27
SRGAP3-204ENST00000470951 CCDC186Q7Z3E2 898 aa13.38□□□□□ -0.27
SRGAP3-204ENST00000470951 CCDC112Q8NEF3 446 aa13.38□□□□□ -0.27
SRGAP3-204ENST00000470951 TNMDQ9H2S6 317 aa13.38□□□□□ -0.27
SRGAP3-204ENST00000470951 TTC21AQ8NDW8 1320 aa13.38□□□□□ -0.27
SRGAP3-204ENST00000470951 ZSCAN25Q6NSZ9 544 aa13.38□□□□□ -0.27
SRGAP3-204ENST00000470951 TTC6Q86TZ1 520 aa13.38□□□□□ -0.27
SRGAP3-204ENST00000470951 DDX41Q9UJV9 622 aaKnown RBP13.38□□□□□ -0.27
SRGAP3-204ENST00000470951 VPS37CA5D8V6 355 aaPredicted RBP13.37□□□□□ -0.27
SRGAP3-204ENST00000470951 TNNT1P13805 278 aa13.37□□□□□ -0.27
SRGAP3-204ENST00000470951 PPP1R42Q7Z4L9 355 aa13.37□□□□□ -0.27
SRGAP3-204ENST00000470951 JAKMIP1Q96N16 626 aaKnown RBP13.37□□□□□ -0.27
SRGAP3-204ENST00000470951 CBX8Q9HC52 389 aa13.37□□□□□ -0.27
SRGAP3-204ENST00000470951 MORC2Q9Y6X9 1032 aaPredicted RBP13.37□□□□□ -0.27
SRGAP3-204ENST00000470951 ZKSCAN1P17029 563 aaPredicted RBP13.36□□□□□ -0.27
SRGAP3-204ENST00000470951 KCNJ4P48050 445 aa13.36□□□□□ -0.27
SRGAP3-204ENST00000470951 LARP1BQ659C4 914 aaKnown RBP13.36□□□□□ -0.27
SRGAP3-204ENST00000470951 CWC27Q6UX04 472 aaKnown RBP13.36□□□□□ -0.27
SRGAP3-204ENST00000470951 DRC7Q8IY82 874 aa13.36□□□□□ -0.27
SRGAP3-204ENST00000470951 METP08581 1390 aa13.36□□□□□ -0.27
SRGAP3-204ENST00000470951 FLT4P35916 1363 aa13.36□□□□□ -0.27
SRGAP3-204ENST00000470951 PRR36Q9H6K5 1346 aa13.36□□□□□ -0.27
SRGAP3-204ENST00000470951 USP6P35125 1406 aa13.36□□□□□ -0.27
SRGAP3-204ENST00000470951 PLEKHG3A1L390 1219 aa13.36□□□□□ -0.27
SRGAP3-204ENST00000470951 GOLGA6L4A6NEF3 574 aa13.36□□□□□ -0.27
SRGAP3-204ENST00000470951 ANKRD1Q15327 319 aa13.36□□□□□ -0.27
SRGAP3-204ENST00000470951 LUZP1Q86V48 1076 aa13.36□□□□□ -0.27
SRGAP3-204ENST00000470951 TRIM5Q9C035 493 aa13.36□□□□□ -0.27
SRGAP3-204ENST00000470951 CLSTN2Q9H4D0 955 aa13.36□□□□□ -0.27
SRGAP3-204ENST00000470951 SBNO1A3KN83 1393 aa13.36□□□□□ -0.27
SRGAP3-204ENST00000470951 IGSF1Q8N6C5 1336 aa13.36□□□□□ -0.27
SRGAP3-204ENST00000470951 NPHP4O75161 1426 aaPredicted RBP13.36□□□□□ -0.27
SRGAP3-204ENST00000470951 FOXO3O43524 673 aa13.35□□□□□ -0.27
SRGAP3-204ENST00000470951 PSMA5P28066 241 aa13.35□□□□□ -0.27
SRGAP3-204ENST00000470951 ANO6Q4KMQ2 910 aa13.35□□□□□ -0.27
SRGAP3-204ENST00000470951 CCDC82Q8N4S0 544 aa13.35□□□□□ -0.27
SRGAP3-204ENST00000470951 C16orf45Q96MC5 204 aaPredicted RBP13.35□□□□□ -0.27
SRGAP3-204ENST00000470951 ALDH8A1Q9H2A2 487 aaPredicted RBP13.35□□□□□ -0.27
SRGAP3-204ENST00000470951 SPG7Q9UQ90 795 aa13.35□□□□□ -0.27
SRGAP3-204ENST00000470951 PLEKHG1Q9ULL1 1385 aa13.35□□□□□ -0.27
SRGAP3-204ENST00000470951 MAP4K4O95819 1239 aaPredicted RBP13.35□□□□□ -0.27
SRGAP3-204ENST00000470951 ME3Q16798 604 aa13.35□□□□□ -0.27
SRGAP3-204ENST00000470951 CARD10Q9BWT7 1032 aa13.35□□□□□ -0.27
SRGAP3-204ENST00000470951 EFCC1Q9HA90 598 aa13.35□□□□□ -0.27
SRGAP3-204ENST00000470951 CCDC66A2RUB6 948 aa13.34□□□□□ -0.27
SRGAP3-204ENST00000470951 HIP1O00291 1037 aa13.34□□□□□ -0.27
SRGAP3-204ENST00000470951 LIG1P18858 919 aa13.34□□□□□ -0.27
SRGAP3-204ENST00000470951 NECTIN1Q15223 517 aa13.34□□□□□ -0.27
SRGAP3-204ENST00000470951 SARM1Q6SZW1 724 aa13.34□□□□□ -0.27
SRGAP3-204ENST00000470951 ZNF771Q7L3S4 317 aaPredicted RBP13.34□□□□□ -0.27
SRGAP3-204ENST00000470951 GPATCH3Q96I76 525 aa13.34□□□□□ -0.27
SRGAP3-204ENST00000470951 SLC24A3Q9HC58 644 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms