RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 LY75O60449 1722 aa12.14□□□□□ -0.47
CCM2-204ENST00000470837 USP42Q9H9J4 1324 aaKnown RBP12.14□□□□□ -0.47
CCM2-204ENST00000470837 IGHDP01880 384 aa12.14□□□□□ -0.47
CCM2-204ENST00000470837 RTL5Q5HYW3 569 aaPredicted RBP12.14□□□□□ -0.47
CCM2-204ENST00000470837 BICDL1Q6ZP65 573 aa12.14□□□□□ -0.47
CCM2-204ENST00000470837 ZNF34Q8IZ26 560 aa12.14□□□□□ -0.47
CCM2-204ENST00000470837 SUCLG2Q96I99 432 aa12.14□□□□□ -0.47
CCM2-204ENST00000470837 CAMKK2Q96RR4 588 aa12.14□□□□□ -0.47
CCM2-204ENST00000470837 NYXQ9GZU5 481 aa12.14□□□□□ -0.47
CCM2-204ENST00000470837 CHMP3Q9Y3E7 222 aa12.14□□□□□ -0.47
CCM2-204ENST00000470837 C4BP0C0L5 1744 aa12.14□□□□□ -0.47
CCM2-204ENST00000470837 SH3TC1Q8TE82 1336 aa12.13□□□□□ -0.47
CCM2-204ENST00000470837 FAM177BA6PVY3 158 aa12.13□□□□□ -0.47
CCM2-204ENST00000470837 OS9Q13438 667 aaPredicted RBP12.13□□□□□ -0.47
CCM2-204ENST00000470837 HSP90AB4PQ58FF6 505 aa12.13□□□□□ -0.47
CCM2-204ENST00000470837 BICC1Q9H694 974 aaKnown RBP12.13□□□□□ -0.47
CCM2-204ENST00000470837 SRP68Q9UHB9 627 aaKnown RBP12.13□□□□□ -0.47
CCM2-204ENST00000470837 COL5A3P25940 1745 aaPredicted RBP12.13□□□□□ -0.47
CCM2-204ENST00000470837 RREB1Q92766 1687 aa12.13□□□□□ -0.47
CCM2-204ENST00000470837 KDM2BQ8NHM5 1336 aa12.12□□□□□ -0.47
CCM2-204ENST00000470837 IRS4O14654 1257 aaPredicted RBP12.12□□□□□ -0.47
CCM2-204ENST00000470837 SMIM5Q71RC9 77 aa12.12□□□□□ -0.47
CCM2-204ENST00000470837 NBPF5PQ86XG9 351 aaPredicted RBP12.12□□□□□ -0.47
CCM2-204ENST00000470837 JARID2Q92833 1246 aaPredicted RBP12.12□□□□□ -0.47
CCM2-204ENST00000470837 AKT1S1Q96B36 256 aa12.12□□□□□ -0.47
CCM2-204ENST00000470837 FAM89AQ96GI7 184 aa12.12□□□□□ -0.47
CCM2-204ENST00000470837 CDHR2Q9BYE9 1310 aa12.11□□□□□ -0.47
CCM2-204ENST00000470837 ARFGEF2Q9Y6D5 1785 aa12.11□□□□□ -0.47
CCM2-204ENST00000470837 MTX1Q13505 466 aa12.11□□□□□ -0.47
CCM2-204ENST00000470837 ZNF827Q17R98 1081 aa12.11□□□□□ -0.47
CCM2-204ENST00000470837 TAF7LQ5H9L4 462 aa12.11□□□□□ -0.47
CCM2-204ENST00000470837 SUSD4Q5VX71 490 aa12.11□□□□□ -0.47
CCM2-204ENST00000470837 TBC1D9BQ66K14 1250 aa12.11□□□□□ -0.47
CCM2-204ENST00000470837 TPTE2Q6XPS3 522 aa12.11□□□□□ -0.47
CCM2-204ENST00000470837 DEFB132Q7Z7B7 95 aa12.11□□□□□ -0.47
CCM2-204ENST00000470837 SIRT2Q8IXJ6 389 aa12.11□□□□□ -0.47
CCM2-204ENST00000470837 UBN2Q6ZU65 1347 aa12.11□□□□□ -0.47
CCM2-204ENST00000470837 PNMA6EA0A0J9YXQ4 647 aa12.1□□□□□ -0.47
CCM2-204ENST00000470837 PDE8AO60658 829 aa12.1□□□□□ -0.47
CCM2-204ENST00000470837 SURF6O75683 361 aaKnown RBP12.1□□□□□ -0.47
CCM2-204ENST00000470837 CASP7P55210 303 aa12.1□□□□□ -0.47
CCM2-204ENST00000470837 SLC15A2Q16348 729 aa12.1□□□□□ -0.47
CCM2-204ENST00000470837 CCDC57Q2TAC2 916 aa12.1□□□□□ -0.47
CCM2-204ENST00000470837 ANKRD45Q5TZF3 282 aa12.1□□□□□ -0.47
CCM2-204ENST00000470837 LMBR1LQ6UX01 489 aa12.1□□□□□ -0.47
CCM2-204ENST00000470837 ERC1Q8IUD2 1116 aa12.1□□□□□ -0.47
CCM2-204ENST00000470837 SMC5Q8IY18 1101 aa12.1□□□□□ -0.47
CCM2-204ENST00000470837 NLGN1Q8N2Q7 840 aa12.1□□□□□ -0.47
CCM2-204ENST00000470837 SSH3Q8TE77 659 aa12.1□□□□□ -0.47
CCM2-204ENST00000470837 DCTPP1Q9H773 170 aa12.1□□□□□ -0.47
CCM2-204ENST00000470837 CARMIL3Q8ND23 1372 aa12.09□□□□□ -0.47
CCM2-204ENST00000470837 APBB1O00213 710 aa12.09□□□□□ -0.47
CCM2-204ENST00000470837 RAB11FIP3O75154 756 aa12.09□□□□□ -0.47
CCM2-204ENST00000470837 G3BP1Q13283 466 aaKnown RBP eCLIP12.09□□□□□ -0.47
CCM2-204ENST00000470837 POLA2Q14181 598 aa12.09□□□□□ -0.47
CCM2-204ENST00000470837 AMIGO3Q86WK7 504 aa12.09□□□□□ -0.47
CCM2-204ENST00000470837 PLA2G12BQ9BX93 195 aa12.09□□□□□ -0.47
CCM2-204ENST00000470837 N4BP2Q86UW6 1770 aaPredicted RBP12.09□□□□□ -0.47
CCM2-204ENST00000470837 NUP188Q5SRE5 1749 aa12.08□□□□□ -0.47
CCM2-204ENST00000470837 TNS1Q9HBL0 1735 aaKnown RBP12.08□□□□□ -0.47
CCM2-204ENST00000470837 NTSR2O95665 410 aa12.08□□□□□ -0.48
CCM2-204ENST00000470837 GYS1P13807 737 aa12.08□□□□□ -0.48
CCM2-204ENST00000470837 CTSWP56202 376 aa12.08□□□□□ -0.48
CCM2-204ENST00000470837 ST5P78524 1137 aa12.08□□□□□ -0.48
CCM2-204ENST00000470837 IFIT5Q13325 482 aaKnown RBP12.08□□□□□ -0.48
CCM2-204ENST00000470837 RABL6Q3YEC7 729 aaPredicted RBP12.08□□□□□ -0.48
CCM2-204ENST00000470837 CCDC152Q4G0S7 254 aa12.08□□□□□ -0.48
CCM2-204ENST00000470837 CNBD1Q8NA66 436 aa12.08□□□□□ -0.48
CCM2-204ENST00000470837 BCL11AQ9H165 835 aa12.08□□□□□ -0.48
CCM2-204ENST00000470837 BCL2L12Q9HB09 334 aa12.08□□□□□ -0.48
CCM2-204ENST00000470837 EXOC6BQ9Y2D4 811 aa12.08□□□□□ -0.48
CCM2-204ENST00000470837 EP400Q96L91 3159 aa12.08□□□□□ -0.48
CCM2-204ENST00000470837 MYH14Q7Z406 1995 aaKnown RBP12.08□□□□□ -0.48
CCM2-204ENST00000470837 RGPD3A6NKT7 1758 aaPredicted RBP12.07□□□□□ -0.48
CCM2-204ENST00000470837 RGPD4Q7Z3J3 1758 aa12.07□□□□□ -0.48
CCM2-204ENST00000470837 HCLS1P14317 486 aaPredicted RBP12.07□□□□□ -0.48
CCM2-204ENST00000470837 FOXO4P98177 505 aa12.07□□□□□ -0.48
CCM2-204ENST00000470837 NUCB1Q02818 461 aa12.07□□□□□ -0.48
CCM2-204ENST00000470837 NFIXQ14938 502 aa12.07□□□□□ -0.48
CCM2-204ENST00000470837 EPHA10Q5JZY3 1008 aa12.07□□□□□ -0.48
CCM2-204ENST00000470837 CHD1LQ86WJ1 897 aa12.07□□□□□ -0.48
CCM2-204ENST00000470837 COL23A1Q86Y22 540 aaPredicted RBP12.07□□□□□ -0.48
CCM2-204ENST00000470837 NUTM1Q86Y26 1132 aa12.07□□□□□ -0.48
CCM2-204ENST00000470837 KAZALD1Q96I82 304 aa12.07□□□□□ -0.48
CCM2-204ENST00000470837 LRRCC1Q9C099 1032 aa12.07□□□□□ -0.48
CCM2-204ENST00000470837 PDZRN3Q9UPQ7 1066 aa12.07□□□□□ -0.48
CCM2-204ENST00000470837 TAF1LQ8IZX4 1826 aa12.07□□□□□ -0.48
CCM2-204ENST00000470837 ANKRD18BA2A2Z9 1011 aa12.06□□□□□ -0.48
CCM2-204ENST00000470837 SOCS7O14512 581 aa12.06□□□□□ -0.48
CCM2-204ENST00000470837 RGS3P49796 1198 aa12.06□□□□□ -0.48
CCM2-204ENST00000470837 KIF1BPQ96EK5 621 aa12.06□□□□□ -0.48
CCM2-204ENST00000470837 NLRP3Q96P20 1036 aa12.06□□□□□ -0.48
CCM2-204ENST00000470837 PARP3Q9Y6F1 533 aa12.06□□□□□ -0.48
CCM2-204ENST00000470837 PNPLA7Q6ZV29 1317 aa12.06□□□□□ -0.48
CCM2-204ENST00000470837 ERFEQ4G0M1 354 aa12.05□□□□□ -0.48
CCM2-204ENST00000470837 SYNE4Q8N205 404 aa12.05□□□□□ -0.48
CCM2-204ENST00000470837 CCDC85AQ96PX6 553 aaPredicted RBP12.05□□□□□ -0.48
CCM2-204ENST00000470837 LNPKQ9C0E8 428 aa12.05□□□□□ -0.48
CCM2-204ENST00000470837 SIL1Q9H173 461 aa12.05□□□□□ -0.48
CCM2-204ENST00000470837 ANO8Q9HCE9 1232 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms