RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-233	ENST00000470710	RGPD4	Q7Z3J3	1758 aa		10.87	□□□□□ -0.67
HDLBP-233	ENST00000470710	TAF1L	Q8IZX4	1826 aa		10.86	□□□□□ -0.67
HDLBP-233	ENST00000470710	ZPR1	O75312	459 aa		10.86	□□□□□ -0.67
HDLBP-233	ENST00000470710	GPT	P24298	496 aa		10.86	□□□□□ -0.67
HDLBP-233	ENST00000470710	SF3B2	Q13435	895 aa	Known RBP	10.86	□□□□□ -0.67
HDLBP-233	ENST00000470710	RABL6	Q3YEC7	729 aa	Predicted RBP	10.86	□□□□□ -0.67
HDLBP-233	ENST00000470710	CCDC125	Q86Z20	511 aa		10.86	□□□□□ -0.67
HDLBP-233	ENST00000470710	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	10.86	□□□□□ -0.67
HDLBP-233	ENST00000470710	SSH3	Q8TE77	659 aa		10.86	□□□□□ -0.67
HDLBP-233	ENST00000470710	AKT1S1	Q96B36	256 aa		10.86	□□□□□ -0.67
HDLBP-233	ENST00000470710	PLA2G12B	Q9BX93	195 aa		10.86	□□□□□ -0.67
HDLBP-233	ENST00000470710	DCTPP1	Q9H773	170 aa		10.86	□□□□□ -0.67
HDLBP-233	ENST00000470710	BCL2L12	Q9HB09	334 aa		10.86	□□□□□ -0.67
HDLBP-233	ENST00000470710	UBN2	Q6ZU65	1347 aa		10.85	□□□□□ -0.67
HDLBP-233	ENST00000470710	CDHR2	Q9BYE9	1310 aa		10.85	□□□□□ -0.67
HDLBP-233	ENST00000470710	USP42	Q9H9J4	1324 aa	Known RBP	10.85	□□□□□ -0.67
HDLBP-233	ENST00000470710	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	10.85	□□□□□ -0.67
HDLBP-233	ENST00000470710	PNMA6E	A0A0J9YXQ4	647 aa		10.85	□□□□□ -0.67
HDLBP-233	ENST00000470710	RFC4	P35249	363 aa		10.85	□□□□□ -0.67
HDLBP-233	ENST00000470710	BAG6	P46379	1132 aa		10.85	□□□□□ -0.67
HDLBP-233	ENST00000470710	PPP1R42	Q7Z4L9	355 aa		10.85	□□□□□ -0.67
HDLBP-233	ENST00000470710	BICC1	Q9H694	974 aa	Known RBP	10.85	□□□□□ -0.67
HDLBP-233	ENST00000470710	SRGAP3	O43295	1099 aa		10.84	□□□□□ -0.67
HDLBP-233	ENST00000470710	ZNF827	Q17R98	1081 aa		10.84	□□□□□ -0.67
HDLBP-233	ENST00000470710	EPHA10	Q5JZY3	1008 aa		10.84	□□□□□ -0.67
HDLBP-233	ENST00000470710	USPL1	Q5W0Q7	1092 aa		10.84	□□□□□ -0.67
HDLBP-233	ENST00000470710	SMIM5	Q71RC9	77 aa		10.84	□□□□□ -0.67
HDLBP-233	ENST00000470710	FLAD1	Q8NFF5	587 aa		10.84	□□□□□ -0.67
HDLBP-233	ENST00000470710	UTP14A	Q9BVJ6	771 aa	Known RBP	10.84	□□□□□ -0.67
HDLBP-233	ENST00000470710	SRP68	Q9UHB9	627 aa	Known RBP	10.84	□□□□□ -0.67
HDLBP-233	ENST00000470710	NIP7	Q9Y221	180 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
HDLBP-233	ENST00000470710	BCOR	Q6W2J9	1755 aa		10.83	□□□□□ -0.68
HDLBP-233	ENST00000470710	SCN7A	Q01118	1682 aa		10.83	□□□□□ -0.68
HDLBP-233	ENST00000470710	PHF14	O94880	888 aa		10.83	□□□□□ -0.68
HDLBP-233	ENST00000470710	HSP90B1	P14625	803 aa	Known RBP	10.83	□□□□□ -0.68
HDLBP-233	ENST00000470710	FOXO4	P98177	505 aa		10.83	□□□□□ -0.68
HDLBP-233	ENST00000470710	NUCB1	Q02818	461 aa		10.83	□□□□□ -0.68
HDLBP-233	ENST00000470710	EN1	Q05925	392 aa	Predicted RBP	10.83	□□□□□ -0.68
HDLBP-233	ENST00000470710	SUSD4	Q5VX71	490 aa		10.83	□□□□□ -0.68
HDLBP-233	ENST00000470710	JARID2	Q92833	1246 aa	Predicted RBP	10.83	□□□□□ -0.68
HDLBP-233	ENST00000470710	TFCP2L1	Q9NZI6	479 aa		10.83	□□□□□ -0.68
HDLBP-233	ENST00000470710	TRMT112	Q9UI30	125 aa	Known RBP	10.83	□□□□□ -0.68
HDLBP-233	ENST00000470710	PDZRN3	Q9UPQ7	1066 aa		10.83	□□□□□ -0.68
HDLBP-233	ENST00000470710	NOP58	Q9Y2X3	529 aa	Known RBP	10.83	□□□□□ -0.68
HDLBP-233	ENST00000470710	SH3TC1	Q8TE82	1336 aa		10.83	□□□□□ -0.68
HDLBP-233	ENST00000470710	NTSR2	O95665	410 aa		10.82	□□□□□ -0.68
HDLBP-233	ENST00000470710	EZH2	Q15910	746 aa	Known RBP	10.82	□□□□□ -0.68
HDLBP-233	ENST00000470710	HSP90AB4P	Q58FF6	505 aa		10.82	□□□□□ -0.68
HDLBP-233	ENST00000470710	TBC1D9B	Q66K14	1250 aa		10.82	□□□□□ -0.68
HDLBP-233	ENST00000470710	PELP1	Q8IZL8	1130 aa	Known RBP	10.82	□□□□□ -0.68
HDLBP-233	ENST00000470710	CNKSR2	Q8WXI2	1034 aa		10.82	□□□□□ -0.68
HDLBP-233	ENST00000470710	FAM89A	Q96GI7	184 aa		10.82	□□□□□ -0.68
HDLBP-233	ENST00000470710	UBR3	Q6ZT12	1888 aa		10.81	□□□□□ -0.68
HDLBP-233	ENST00000470710	ANKRD36C	Q5JPF3	1778 aa		10.81	□□□□□ -0.68
HDLBP-233	ENST00000470710	IRS4	O14654	1257 aa	Predicted RBP	10.81	□□□□□ -0.68
HDLBP-233	ENST00000470710	RAB11FIP3	O75154	756 aa		10.81	□□□□□ -0.68
HDLBP-233	ENST00000470710	CSF1R	P07333	972 aa		10.81	□□□□□ -0.68
HDLBP-233	ENST00000470710	GYS1	P13807	737 aa		10.81	□□□□□ -0.68
HDLBP-233	ENST00000470710	LMBR1L	Q6UX01	489 aa		10.81	□□□□□ -0.68
HDLBP-233	ENST00000470710	CHD1L	Q86WJ1	897 aa		10.81	□□□□□ -0.68
HDLBP-233	ENST00000470710	SETDB2	Q96T68	719 aa		10.81	□□□□□ -0.68
HDLBP-233	ENST00000470710	NYX	Q9GZU5	481 aa		10.81	□□□□□ -0.68
HDLBP-233	ENST00000470710	NUP98	P52948	1817 aa		10.81	□□□□□ -0.68
HDLBP-233	ENST00000470710	AFDN	P55196	1824 aa	Known RBP	10.81	□□□□□ -0.68
HDLBP-233	ENST00000470710	DCAF8L1	A6NGE4	600 aa		10.8	□□□□□ -0.68
HDLBP-233	ENST00000470710	PDE8A	O60658	829 aa		10.8	□□□□□ -0.68
HDLBP-233	ENST00000470710	RFX5	P48382	616 aa	Predicted RBP	10.8	□□□□□ -0.68
HDLBP-233	ENST00000470710	CTSW	P56202	376 aa		10.8	□□□□□ -0.68
HDLBP-233	ENST00000470710	RTL5	Q5HYW3	569 aa	Predicted RBP	10.8	□□□□□ -0.68
HDLBP-233	ENST00000470710	ANKRD45	Q5TZF3	282 aa		10.8	□□□□□ -0.68
HDLBP-233	ENST00000470710	SYNE4	Q8N205	404 aa		10.8	□□□□□ -0.68
HDLBP-233	ENST00000470710	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.8	□□□□□ -0.68
HDLBP-233	ENST00000470710	COPRS	Q9NQ92	184 aa		10.8	□□□□□ -0.68
HDLBP-233	ENST00000470710	STK32B	Q9NY57	414 aa		10.8	□□□□□ -0.68
HDLBP-233	ENST00000470710	CARMIL3	Q8ND23	1372 aa		10.79	□□□□□ -0.68
HDLBP-233	ENST00000470710	SURF6	O75683	361 aa	Known RBP	10.79	□□□□□ -0.68
HDLBP-233	ENST00000470710	NFIX	Q14938	502 aa		10.79	□□□□□ -0.68
HDLBP-233	ENST00000470710	SLC15A2	Q16348	729 aa		10.79	□□□□□ -0.68
HDLBP-233	ENST00000470710	SLC10A5	Q5PT55	438 aa		10.79	□□□□□ -0.68
HDLBP-233	ENST00000470710	DEFB132	Q7Z7B7	95 aa		10.79	□□□□□ -0.68
HDLBP-233	ENST00000470710	COL23A1	Q86Y22	540 aa	Predicted RBP	10.79	□□□□□ -0.68
HDLBP-233	ENST00000470710	ERC1	Q8IUD2	1116 aa		10.79	□□□□□ -0.68
HDLBP-233	ENST00000470710	EXOC6B	Q9Y2D4	811 aa		10.79	□□□□□ -0.68
HDLBP-233	ENST00000470710	PNPLA7	Q6ZV29	1317 aa		10.79	□□□□□ -0.68
HDLBP-233	ENST00000470710	C4A	P0C0L4	1744 aa		10.78	□□□□□ -0.68
HDLBP-233	ENST00000470710	TM4SF1	P30408	202 aa		10.78	□□□□□ -0.68
HDLBP-233	ENST00000470710	HOXD11	P31277	338 aa	Predicted RBP	10.78	□□□□□ -0.68
HDLBP-233	ENST00000470710	PTPN12	Q05209	780 aa	Known RBP	10.78	□□□□□ -0.68
HDLBP-233	ENST00000470710	TPTE2	Q6XPS3	522 aa		10.78	□□□□□ -0.68
HDLBP-233	ENST00000470710	BICDL1	Q6ZP65	573 aa		10.78	□□□□□ -0.68
HDLBP-233	ENST00000470710	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.78	□□□□□ -0.68
HDLBP-233	ENST00000470710	TTLL11	Q8NHH1	800 aa		10.78	□□□□□ -0.68
HDLBP-233	ENST00000470710	KIF1BP	Q96EK5	621 aa		10.78	□□□□□ -0.68
HDLBP-233	ENST00000470710	LRRCC1	Q9C099	1032 aa		10.78	□□□□□ -0.68
HDLBP-233	ENST00000470710	LNPK	Q9C0E8	428 aa		10.78	□□□□□ -0.68
HDLBP-233	ENST00000470710	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.78	□□□□□ -0.68
HDLBP-233	ENST00000470710	PA2G4	Q9UQ80	394 aa	Known RBP	10.78	□□□□□ -0.68
HDLBP-233	ENST00000470710	RTL9	Q8NET4	1388 aa		10.77	□□□□□ -0.68
HDLBP-233	ENST00000470710	FAM177B	A6PVY3	158 aa		10.77	□□□□□ -0.69
HDLBP-233	ENST00000470710	HCLS1	P14317	486 aa	Predicted RBP	10.77	□□□□□ -0.69

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