RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 NOVA2Q9UNW9 492 aaKnown RBP10.47□□□□□ -0.73
PTP4A1-202ENST00000470661 SPAG9O60271 1321 aaKnown RBP10.47□□□□□ -0.73
PTP4A1-202ENST00000470661 VPS8Q8N3P4 1428 aa10.47□□□□□ -0.73
PTP4A1-202ENST00000470661 ZMYM4Q5VZL5 1548 aa10.47□□□□□ -0.73
PTP4A1-202ENST00000470661 A0A1B0GTH6 734 aa10.46□□□□□ -0.73
PTP4A1-202ENST00000470661 M0R2N6 131 aa10.46□□□□□ -0.73
PTP4A1-202ENST00000470661 VSIG8P0DPA2 414 aa10.46□□□□□ -0.73
PTP4A1-202ENST00000470661 MSX1P28360 303 aa10.46□□□□□ -0.73
PTP4A1-202ENST00000470661 GMPRP36959 345 aa10.46□□□□□ -0.73
PTP4A1-202ENST00000470661 ZDHHC1Q8WTX9 485 aa10.46□□□□□ -0.73
PTP4A1-202ENST00000470661 ZNF518AQ6AHZ1 1483 aa10.46□□□□□ -0.74
PTP4A1-202ENST00000470661 ABCC1P33527 1531 aa10.46□□□□□ -0.74
PTP4A1-202ENST00000470661 SYCP2Q9BX26 1530 aa10.46□□□□□ -0.74
PTP4A1-202ENST00000470661 HECW2Q9P2P5 1572 aa10.46□□□□□ -0.74
PTP4A1-202ENST00000470661 RIMS1Q86UR5 1692 aaKnown RBP10.46□□□□□ -0.74
PTP4A1-202ENST00000470661 NCOA2Q15596 1464 aa10.45□□□□□ -0.74
PTP4A1-202ENST00000470661 F11P03951 625 aa10.45□□□□□ -0.74
PTP4A1-202ENST00000470661 DBN1Q16643 649 aa10.45□□□□□ -0.74
PTP4A1-202ENST00000470661 GPR161Q8N6U8 529 aaKnown RBP10.45□□□□□ -0.74
PTP4A1-202ENST00000470661 AIDAQ96BJ3 306 aa10.45□□□□□ -0.74
PTP4A1-202ENST00000470661 TIAM1Q13009 1591 aa10.44□□□□□ -0.74
PTP4A1-202ENST00000470661 MAGI2Q86UL8 1455 aa10.44□□□□□ -0.74
PTP4A1-202ENST00000470661 C9orf84Q5VXU9 1444 aa10.44□□□□□ -0.74
PTP4A1-202ENST00000470661 TRIM22Q8IYM9 498 aa10.44□□□□□ -0.74
PTP4A1-202ENST00000470661 GAS2L2Q8NHY3 880 aa10.44□□□□□ -0.74
PTP4A1-202ENST00000470661 NANOS1Q8WY41 292 aaKnown RBP10.44□□□□□ -0.74
PTP4A1-202ENST00000470661 PBXIP1Q96AQ6 731 aa10.44□□□□□ -0.74
PTP4A1-202ENST00000470661 ZNF837Q96EG3 531 aaPredicted RBP10.44□□□□□ -0.74
PTP4A1-202ENST00000470661 HINFPQ9BQA5 517 aa10.44□□□□□ -0.74
PTP4A1-202ENST00000470661 RUBCNLQ9H714 662 aa10.44□□□□□ -0.74
PTP4A1-202ENST00000470661 ZMIZ1Q9ULJ6 1067 aa10.44□□□□□ -0.74
PTP4A1-202ENST00000470661 ITSN2Q9NZM3 1697 aa10.44□□□□□ -0.74
PTP4A1-202ENST00000470661 ABCA6Q8N139 1617 aa10.44□□□□□ -0.74
PTP4A1-202ENST00000470661 DIP2CQ9Y2E4 1556 aa10.43□□□□□ -0.74
PTP4A1-202ENST00000470661 SH3PXD2AQ5TCZ1 1133 aa10.43□□□□□ -0.74
PTP4A1-202ENST00000470661 SV2AQ7L0J3 742 aa10.43□□□□□ -0.74
PTP4A1-202ENST00000470661 FAM200AQ8TCP9 573 aa10.43□□□□□ -0.74
PTP4A1-202ENST00000470661 STK32AQ8WU08 396 aa10.43□□□□□ -0.74
PTP4A1-202ENST00000470661 ARID3AQ99856 593 aa10.43□□□□□ -0.74
PTP4A1-202ENST00000470661 KDM5CP41229 1560 aa10.43□□□□□ -0.74
PTP4A1-202ENST00000470661 LRRC9Q6ZRR7 1453 aa10.42□□□□□ -0.74
PTP4A1-202ENST00000470661 KIDINS220Q9ULH0 1771 aa10.42□□□□□ -0.74
PTP4A1-202ENST00000470661 C21orf2O43822 256 aa10.42□□□□□ -0.74
PTP4A1-202ENST00000470661 ATP4AP20648 1035 aa10.42□□□□□ -0.74
PTP4A1-202ENST00000470661 GGT6Q6P531 493 aa10.42□□□□□ -0.74
PTP4A1-202ENST00000470661 ZNF232Q9UNY5 417 aa10.42□□□□□ -0.74
PTP4A1-202ENST00000470661 EHBP1L1Q8N3D4 1523 aa10.42□□□□□ -0.74
PTP4A1-202ENST00000470661 MLH3Q9UHC1 1453 aa10.42□□□□□ -0.74
PTP4A1-202ENST00000470661 THBS1P07996 1170 aa10.41□□□□□ -0.74
PTP4A1-202ENST00000470661 TXLNAP40222 546 aa10.41□□□□□ -0.74
PTP4A1-202ENST00000470661 TEAD4Q15561 434 aa10.41□□□□□ -0.74
PTP4A1-202ENST00000470661 SCG3Q8WXD2 468 aaKnown RBP10.41□□□□□ -0.74
PTP4A1-202ENST00000470661 L3MBTL2Q969R5 705 aa10.41□□□□□ -0.74
PTP4A1-202ENST00000470661 NUCKS1Q9H1E3 243 aaKnown RBP10.41□□□□□ -0.74
PTP4A1-202ENST00000470661 MBD5Q9P267 1494 aa10.41□□□□□ -0.74
PTP4A1-202ENST00000470661 GPR25O00155 361 aa10.4□□□□□ -0.74
PTP4A1-202ENST00000470661 PPP1R12BO60237 982 aaPredicted RBP10.4□□□□□ -0.74
PTP4A1-202ENST00000470661 NOS2P35228 1153 aa10.4□□□□□ -0.74
PTP4A1-202ENST00000470661 NBPF1Q3BBV0 1214 aa10.4□□□□□ -0.74
PTP4A1-202ENST00000470661 GTPBP3Q969Y2 492 aaKnown RBP10.4□□□□□ -0.74
PTP4A1-202ENST00000470661 SERTM1A2A2V5 107 aa10.39□□□□□ -0.75
PTP4A1-202ENST00000470661 H7C1W4 665 aa10.39□□□□□ -0.75
PTP4A1-202ENST00000470661 EML1O00423 815 aa10.39□□□□□ -0.75
PTP4A1-202ENST00000470661 ATG7O95352 703 aa10.39□□□□□ -0.75
PTP4A1-202ENST00000470661 CSB-PGBD3P0DP91 1061 aa10.39□□□□□ -0.75
PTP4A1-202ENST00000470661 PSMA6P60900 246 aaKnown RBP10.39□□□□□ -0.75
PTP4A1-202ENST00000470661 PGBD3Q8N328 593 aa10.39□□□□□ -0.75
PTP4A1-202ENST00000470661 KIAA1107Q9UPP5 1409 aa10.39□□□□□ -0.75
PTP4A1-202ENST00000470661 ELOAQ14241 798 aaKnown RBP10.38□□□□□ -0.75
PTP4A1-202ENST00000470661 RNFT1Q5M7Z0 435 aa10.38□□□□□ -0.75
PTP4A1-202ENST00000470661 COL25A1Q9BXS0 654 aaPredicted RBP10.38□□□□□ -0.75
PTP4A1-202ENST00000470661 SUPT6HQ7KZ85 1726 aaKnown RBP10.38□□□□□ -0.75
PTP4A1-202ENST00000470661 ATAD2Q6PL18 1390 aa10.38□□□□□ -0.75
PTP4A1-202ENST00000470661 CAMSAP2Q08AD1 1489 aa10.37□□□□□ -0.75
PTP4A1-202ENST00000470661 FER1L4A9Z1Z3 1794 aa10.37□□□□□ -0.75
PTP4A1-202ENST00000470661 TATP17735 454 aaPredicted RBP10.37□□□□□ -0.75
PTP4A1-202ENST00000470661 KRT76Q01546 638 aa10.37□□□□□ -0.75
PTP4A1-202ENST00000470661 ARSJQ5FYB0 599 aaPredicted RBP10.37□□□□□ -0.75
PTP4A1-202ENST00000470661 ZDHHC3Q9NYG2 299 aa10.37□□□□□ -0.75
PTP4A1-202ENST00000470661 HCN4Q9Y3Q4 1203 aa10.37□□□□□ -0.75
PTP4A1-202ENST00000470661 LMTK3Q96Q04 1460 aa10.36□□□□□ -0.75
PTP4A1-202ENST00000470661 KIF3BO15066 747 aa10.36□□□□□ -0.75
PTP4A1-202ENST00000470661 TMEM164Q5U3C3 297 aa10.36□□□□□ -0.75
PTP4A1-202ENST00000470661 C1orf216Q8TAB5 229 aa10.36□□□□□ -0.75
PTP4A1-202ENST00000470661 GMCL1Q96IK5 515 aa10.36□□□□□ -0.75
PTP4A1-202ENST00000470661 CRISPLD1Q9H336 500 aa10.36□□□□□ -0.75
PTP4A1-202ENST00000470661 CHMP3Q9Y3E7 222 aa10.36□□□□□ -0.75
PTP4A1-202ENST00000470661 ATP7AQ04656 1500 aa10.36□□□□□ -0.75
PTP4A1-202ENST00000470661 WIPF1O43516 503 aa10.35□□□□□ -0.75
PTP4A1-202ENST00000470661 EFHC2Q5JST6 749 aa10.35□□□□□ -0.75
PTP4A1-202ENST00000470661 KLRG1Q96E93 195 aa10.35□□□□□ -0.75
PTP4A1-202ENST00000470661 CNTNAP3BQ96NU0 1288 aa10.35□□□□□ -0.75
PTP4A1-202ENST00000470661 CNTNAP3Q9BZ76 1288 aa10.35□□□□□ -0.75
PTP4A1-202ENST00000470661 A2MP01023 1474 aa10.35□□□□□ -0.75
PTP4A1-202ENST00000470661 PLEKHH2Q8IVE3 1493 aa10.35□□□□□ -0.75
PTP4A1-202ENST00000470661 ACIN1Q9UKV3 1341 aaKnown RBP10.34□□□□□ -0.75
PTP4A1-202ENST00000470661 A0A1W2PNR3 127 aa10.34□□□□□ -0.75
PTP4A1-202ENST00000470661 TSPY4P0CV99 314 aa10.34□□□□□ -0.75
PTP4A1-202ENST00000470661 TSPY10P0CW01 314 aa10.34□□□□□ -0.75
PTP4A1-202ENST00000470661 GAS6Q14393 721 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms