RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 UBE3BQ7Z3V4 1068 aa18.85■□□□□ 0.61
COL4A5-203ENST00000470339 PPP1R42Q7Z4L9 355 aa18.85■□□□□ 0.61
COL4A5-203ENST00000470339 KAZALD1Q96I82 304 aa18.85■□□□□ 0.61
COL4A5-203ENST00000470339 SUCLG2Q96I99 432 aa18.85■□□□□ 0.61
COL4A5-203ENST00000470339 C4AP0C0L4 1744 aa18.85■□□□□ 0.61
COL4A5-203ENST00000470339 PNMA6EA0A0J9YXQ4 647 aa18.84■□□□□ 0.61
COL4A5-203ENST00000470339 NUCB1Q02818 461 aa18.84■□□□□ 0.61
COL4A5-203ENST00000470339 TRAPPC3LQ5T215 181 aa18.84■□□□□ 0.61
COL4A5-203ENST00000470339 ZBTB38Q8NAP3 1195 aaPredicted RBP18.84■□□□□ 0.61
COL4A5-203ENST00000470339 PDZRN3Q9UPQ7 1066 aa18.84■□□□□ 0.61
COL4A5-203ENST00000470339 CDHR2Q9BYE9 1310 aa18.83■□□□□ 0.61
COL4A5-203ENST00000470339 RABL6Q3YEC7 729 aaPredicted RBP18.83■□□□□ 0.6
COL4A5-203ENST00000470339 BICC1Q9H694 974 aaKnown RBP18.83■□□□□ 0.6
COL4A5-203ENST00000470339 MYH3P11055 1940 aa18.82■□□□□ 0.6
COL4A5-203ENST00000470339 SRGAP3O43295 1099 aa18.82■□□□□ 0.6
COL4A5-203ENST00000470339 ZPR1O75312 459 aa18.82■□□□□ 0.6
COL4A5-203ENST00000470339 SSFA2P28290 1259 aa18.82■□□□□ 0.6
COL4A5-203ENST00000470339 ARHGEF1Q92888 912 aaKnown RBP18.82■□□□□ 0.6
COL4A5-203ENST00000470339 UPF1Q92900 1129 aaKnown RBP eCLIP18.82■□□□□ 0.6
COL4A5-203ENST00000470339 PLA2G12BQ9BX93 195 aa18.82■□□□□ 0.6
COL4A5-203ENST00000470339 GPTP24298 496 aa18.81■□□□□ 0.6
COL4A5-203ENST00000470339 HSP90B1P14625 803 aaKnown RBP18.8■□□□□ 0.6
COL4A5-203ENST00000470339 RFC4P35249 363 aa18.8■□□□□ 0.6
COL4A5-203ENST00000470339 FOXO4P98177 505 aa18.8■□□□□ 0.6
COL4A5-203ENST00000470339 HSP90AB4PQ58FF6 505 aa18.8■□□□□ 0.6
COL4A5-203ENST00000470339 CHD1LQ86WJ1 897 aa18.8■□□□□ 0.6
COL4A5-203ENST00000470339 NOP58Q9Y2X3 529 aaKnown RBP18.8■□□□□ 0.6
COL4A5-203ENST00000470339 UBN2Q6ZU65 1347 aa18.79■□□□□ 0.6
COL4A5-203ENST00000470339 USP42Q9H9J4 1324 aaKnown RBP18.79■□□□□ 0.6
COL4A5-203ENST00000470339 RAB11FIP3O75154 756 aa18.79■□□□□ 0.6
COL4A5-203ENST00000470339 EPHA10Q5JZY3 1008 aa18.79■□□□□ 0.6
COL4A5-203ENST00000470339 ANKRD45Q5TZF3 282 aa18.79■□□□□ 0.6
COL4A5-203ENST00000470339 NIP7Q9Y221 180 aaKnown RBP eCLIP18.79■□□□□ 0.6
COL4A5-203ENST00000470339 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.78■□□□□ 0.6
COL4A5-203ENST00000470339 USPL1Q5W0Q7 1092 aa18.78■□□□□ 0.6
COL4A5-203ENST00000470339 JARID2Q92833 1246 aaPredicted RBP18.78■□□□□ 0.6
COL4A5-203ENST00000470339 AKT1S1Q96B36 256 aa18.78■□□□□ 0.6
COL4A5-203ENST00000470339 FAM89AQ96GI7 184 aa18.78■□□□□ 0.6
COL4A5-203ENST00000470339 UTP14AQ9BVJ6 771 aaKnown RBP18.78■□□□□ 0.6
COL4A5-203ENST00000470339 BCL2L12Q9HB09 334 aa18.78■□□□□ 0.6
COL4A5-203ENST00000470339 ZBTB47Q9UFB7 747 aaPredicted RBP18.78■□□□□ 0.6
COL4A5-203ENST00000470339 TRMT112Q9UI30 125 aaKnown RBP18.78■□□□□ 0.6
COL4A5-203ENST00000470339 LAMB2P55268 1798 aa18.78■□□□□ 0.6
COL4A5-203ENST00000470339 COL24A1Q17RW2 1714 aa18.77■□□□□ 0.6
COL4A5-203ENST00000470339 SF3B2Q13435 895 aaKnown RBP18.77■□□□□ 0.6
COL4A5-203ENST00000470339 SUSD4Q5VX71 490 aa18.77■□□□□ 0.6
COL4A5-203ENST00000470339 AMIGO3Q86WK7 504 aa18.77■□□□□ 0.6
COL4A5-203ENST00000470339 CCDC125Q86Z20 511 aa18.77■□□□□ 0.6
COL4A5-203ENST00000470339 FLAD1Q8NFF5 587 aa18.77■□□□□ 0.6
COL4A5-203ENST00000470339 CAMKK2Q96RR4 588 aa18.77■□□□□ 0.6
COL4A5-203ENST00000470339 SH3TC1Q8TE82 1336 aa18.76■□□□□ 0.59
COL4A5-203ENST00000470339 SURF6O75683 361 aaKnown RBP18.76■□□□□ 0.59
COL4A5-203ENST00000470339 CSF1RP07333 972 aa18.76■□□□□ 0.59
COL4A5-203ENST00000470339 LMBR1LQ6UX01 489 aa18.76■□□□□ 0.59
COL4A5-203ENST00000470339 TUBGCP6Q96RT7 1819 aa18.76■□□□□ 0.59
COL4A5-203ENST00000470339 QSER1Q2KHR3 1735 aa18.75■□□□□ 0.59
COL4A5-203ENST00000470339 PDE8AO60658 829 aa18.75■□□□□ 0.59
COL4A5-203ENST00000470339 BAG6P46379 1132 aa18.75■□□□□ 0.59
COL4A5-203ENST00000470339 SETDB2Q96T68 719 aa18.75■□□□□ 0.59
COL4A5-203ENST00000470339 COPRSQ9NQ92 184 aa18.75■□□□□ 0.59
COL4A5-203ENST00000470339 SRP68Q9UHB9 627 aaKnown RBP18.75■□□□□ 0.59
COL4A5-203ENST00000470339 DDX60Q8IY21 1712 aaKnown RBP18.74■□□□□ 0.59
COL4A5-203ENST00000470339 IRS4O14654 1257 aaPredicted RBP18.74■□□□□ 0.59
COL4A5-203ENST00000470339 PHF14O94880 888 aa18.74■□□□□ 0.59
COL4A5-203ENST00000470339 NTSR2O95665 410 aa18.74■□□□□ 0.59
COL4A5-203ENST00000470339 RFX5P48382 616 aaPredicted RBP18.74■□□□□ 0.59
COL4A5-203ENST00000470339 RTL5Q5HYW3 569 aaPredicted RBP18.74■□□□□ 0.59
COL4A5-203ENST00000470339 TBC1D9BQ66K14 1250 aa18.74■□□□□ 0.59
COL4A5-203ENST00000470339 SMIM5Q71RC9 77 aa18.74■□□□□ 0.59
COL4A5-203ENST00000470339 ERC1Q8IUD2 1116 aa18.74■□□□□ 0.59
COL4A5-203ENST00000470339 LRRCC1Q9C099 1032 aa18.74■□□□□ 0.59
COL4A5-203ENST00000470339 LNPKQ9C0E8 428 aa18.74■□□□□ 0.59
COL4A5-203ENST00000470339 NYXQ9GZU5 481 aa18.74■□□□□ 0.59
COL4A5-203ENST00000470339 EXOC6BQ9Y2D4 811 aa18.74■□□□□ 0.59
COL4A5-203ENST00000470339 KIF1BPQ96EK5 621 aa18.73■□□□□ 0.59
COL4A5-203ENST00000470339 TFCP2L1Q9NZI6 479 aa18.73■□□□□ 0.59
COL4A5-203ENST00000470339 PDE4AP27815 886 aa18.72■□□□□ 0.59
COL4A5-203ENST00000470339 RGS3P49796 1198 aa18.72■□□□□ 0.59
COL4A5-203ENST00000470339 EN1Q05925 392 aaPredicted RBP18.72■□□□□ 0.59
COL4A5-203ENST00000470339 SLC10A5Q5PT55 438 aa18.72■□□□□ 0.59
COL4A5-203ENST00000470339 CTSWP56202 376 aa18.71■□□□□ 0.59
COL4A5-203ENST00000470339 PTPN12Q05209 780 aaKnown RBP18.71■□□□□ 0.59
COL4A5-203ENST00000470339 G3BP1Q13283 466 aaKnown RBP eCLIP18.71■□□□□ 0.59
COL4A5-203ENST00000470339 EZH2Q15910 746 aaKnown RBP18.71■□□□□ 0.59
COL4A5-203ENST00000470339 ZNF827Q17R98 1081 aa18.71■□□□□ 0.59
COL4A5-203ENST00000470339 SKAP1Q86WV1 359 aa18.71■□□□□ 0.59
COL4A5-203ENST00000470339 SYNE4Q8N205 404 aa18.71■□□□□ 0.59
COL4A5-203ENST00000470339 FBXO3Q9UK99 471 aa18.71■□□□□ 0.59
COL4A5-203ENST00000470339 GYS1P13807 737 aa18.7■□□□□ 0.58
COL4A5-203ENST00000470339 TPTE2Q6XPS3 522 aa18.7■□□□□ 0.58
COL4A5-203ENST00000470339 TTLL11Q8NHH1 800 aa18.7■□□□□ 0.58
COL4A5-203ENST00000470339 RHPN1Q8TCX5 695 aa18.7■□□□□ 0.58
COL4A5-203ENST00000470339 CARMIL3Q8ND23 1372 aa18.69■□□□□ 0.58
COL4A5-203ENST00000470339 OS9Q13438 667 aaPredicted RBP18.69■□□□□ 0.58
COL4A5-203ENST00000470339 CCDC57Q2TAC2 916 aa18.69■□□□□ 0.58
COL4A5-203ENST00000470339 PA2G4Q9UQ80 394 aaKnown RBP18.69■□□□□ 0.58
COL4A5-203ENST00000470339 RTL9Q8NET4 1388 aa18.68■□□□□ 0.58
COL4A5-203ENST00000470339 CASZ1Q86V15 1759 aa18.68■□□□□ 0.58
COL4A5-203ENST00000470339 TM4SF1P30408 202 aa18.68■□□□□ 0.58
COL4A5-203ENST00000470339 IFIT5Q13325 482 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms