RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 RASEFQ8IZ41 740 aa24.21■■□□□ 1.47
CDHR3-207ENST00000470188 FOXD4L4Q8WXT5 416 aaPredicted RBP24.21■■□□□ 1.47
CDHR3-207ENST00000470188 PIP4K2AP48426 406 aaPredicted RBP24.2■■□□□ 1.47
CDHR3-207ENST00000470188 ZSCAN23Q3MJ62 389 aa24.2■■□□□ 1.47
CDHR3-207ENST00000470188 CCDC8Q9H0W5 538 aaPredicted RBP24.2■■□□□ 1.46
CDHR3-207ENST00000470188 CAVIN1Q6NZI2 390 aaKnown RBP24.19■■□□□ 1.46
CDHR3-207ENST00000470188 PDLIM2Q96JY6 352 aa24.19■■□□□ 1.46
CDHR3-207ENST00000470188 EPHA10Q5JZY3 1008 aa24.19■■□□□ 1.46
CDHR3-207ENST00000470188 TTC14Q96N46 770 aa24.19■■□□□ 1.46
CDHR3-207ENST00000470188 NOL7Q9UMY1 257 aaKnown RBP24.19■■□□□ 1.46
CDHR3-207ENST00000470188 ZNF500O60304 480 aaPredicted RBP24.18■■□□□ 1.46
CDHR3-207ENST00000470188 KLHDC4Q8TBB5 520 aa24.18■■□□□ 1.46
CDHR3-207ENST00000470188 CHAMP1Q96JM3 812 aa24.18■■□□□ 1.46
CDHR3-207ENST00000470188 TLR7Q9NYK1 1049 aaKnown RBP24.18■■□□□ 1.46
CDHR3-207ENST00000470188 PTH1RQ03431 593 aa24.17■■□□□ 1.46
CDHR3-207ENST00000470188 BRINP3Q76B58 766 aa24.17■■□□□ 1.46
CDHR3-207ENST00000470188 HIP1O00291 1037 aa24.16■■□□□ 1.46
CDHR3-207ENST00000470188 AK2P54819 239 aa24.16■■□□□ 1.46
CDHR3-207ENST00000470188 GPT2Q8TD30 523 aa24.16■■□□□ 1.46
CDHR3-207ENST00000470188 MAP7D2Q96T17 732 aa24.15■■□□□ 1.46
CDHR3-207ENST00000470188 PARP4Q9UKK3 1724 aaKnown RBP24.15■■□□□ 1.46
CDHR3-207ENST00000470188 PRDM11Q9NQV5 511 aa24.15■■□□□ 1.46
CDHR3-207ENST00000470188 CASTP20810 708 aaKnown RBP24.14■■□□□ 1.45
CDHR3-207ENST00000470188 MCM5P33992 734 aa24.14■■□□□ 1.45
CDHR3-207ENST00000470188 PRPF40BQ6NWY9 871 aaKnown RBP24.14■■□□□ 1.45
CDHR3-207ENST00000470188 UBE3BQ7Z3V4 1068 aa24.14■■□□□ 1.45
CDHR3-207ENST00000470188 JARID2Q92833 1246 aaPredicted RBP24.14■■□□□ 1.45
CDHR3-207ENST00000470188 COPRSQ9NQ92 184 aa24.14■■□□□ 1.45
CDHR3-207ENST00000470188 LIMCH1Q9UPQ0 1083 aa24.14■■□□□ 1.45
CDHR3-207ENST00000470188 CCDC171Q6TFL3 1326 aa24.14■■□□□ 1.45
CDHR3-207ENST00000470188 WDR17Q8IZU2 1322 aa24.14■■□□□ 1.45
CDHR3-207ENST00000470188 RBSNQ9H1K0 784 aa24.13■■□□□ 1.45
CDHR3-207ENST00000470188 BOLA2Q9H3K6 86 aa24.13■■□□□ 1.45
CDHR3-207ENST00000470188 PCDH11XQ9BZA7 1347 aa24.13■■□□□ 1.45
CDHR3-207ENST00000470188 PCDH11YQ9BZA8 1340 aa24.13■■□□□ 1.45
CDHR3-207ENST00000470188 TOM1L2Q6ZVM7 507 aa24.13■■□□□ 1.45
CDHR3-207ENST00000470188 RUFY3Q7L099 469 aa24.13■■□□□ 1.45
CDHR3-207ENST00000470188 PLBD2Q8NHP8 589 aa24.13■■□□□ 1.45
CDHR3-207ENST00000470188 GLI3P10071 1580 aa24.13■■□□□ 1.45
CDHR3-207ENST00000470188 COL15A1P39059 1388 aa24.12■■□□□ 1.45
CDHR3-207ENST00000470188 ATP5J2-PTCD1G3V325 749 aa24.12■■□□□ 1.45
CDHR3-207ENST00000470188 PTCD1O75127 700 aaKnown RBP24.12■■□□□ 1.45
CDHR3-207ENST00000470188 NMIQ13287 307 aaPredicted RBP24.12■■□□□ 1.45
CDHR3-207ENST00000470188 KCNB2Q92953 911 aa24.12■■□□□ 1.45
CDHR3-207ENST00000470188 FAM227BQ96M60 508 aa24.12■■□□□ 1.45
CDHR3-207ENST00000470188 WDR33Q9C0J8 1336 aaKnown RBP24.12■■□□□ 1.45
CDHR3-207ENST00000470188 RABL6Q3YEC7 729 aaPredicted RBP24.12■■□□□ 1.45
CDHR3-207ENST00000470188 ZCRB1Q8TBF4 217 aaKnown RBP24.12■■□□□ 1.45
CDHR3-207ENST00000470188 JAKMIP1Q96N16 626 aaKnown RBP24.12■■□□□ 1.45
CDHR3-207ENST00000470188 LAMB4A4D0S4 1761 aa24.12■■□□□ 1.45
CDHR3-207ENST00000470188 ARFGEF2Q9Y6D5 1785 aa24.12■■□□□ 1.45
CDHR3-207ENST00000470188 A0A087WZG4 1122 aa24.11■■□□□ 1.45
CDHR3-207ENST00000470188 RFX5P48382 616 aaPredicted RBP24.11■■□□□ 1.45
CDHR3-207ENST00000470188 FSD1Q9BTV5 496 aa24.11■■□□□ 1.45
CDHR3-207ENST00000470188 CPA1P15085 419 aa24.1■■□□□ 1.45
CDHR3-207ENST00000470188 PTPN12Q05209 780 aaKnown RBP24.1■■□□□ 1.45
CDHR3-207ENST00000470188 NECTIN1Q15223 517 aa24.1■■□□□ 1.45
CDHR3-207ENST00000470188 TM6SF1Q9BZW5 370 aa24.1■■□□□ 1.45
CDHR3-207ENST00000470188 AFDNP55196 1824 aaKnown RBP24.1■■□□□ 1.45
CDHR3-207ENST00000470188 CSPP1Q1MSJ5 1256 aa24.1■■□□□ 1.45
CDHR3-207ENST00000470188 MBD3O95983 291 aa24.09■■□□□ 1.45
CDHR3-207ENST00000470188 ZKSCAN1P17029 563 aaPredicted RBP24.09■■□□□ 1.45
CDHR3-207ENST00000470188 PRIM1P49642 420 aaKnown RBP24.09■■□□□ 1.45
CDHR3-207ENST00000470188 ADCK5Q3MIX3 580 aa24.09■■□□□ 1.45
CDHR3-207ENST00000470188 VPS53Q5VIR6 699 aa24.09■■□□□ 1.45
CDHR3-207ENST00000470188 LARP6Q9BRS8 491 aaKnown RBP24.09■■□□□ 1.45
CDHR3-207ENST00000470188 SNRKQ9NRH2 765 aa24.09■■□□□ 1.45
CDHR3-207ENST00000470188 RBM27Q9P2N5 1060 aaKnown RBP24.09■■□□□ 1.45
CDHR3-207ENST00000470188 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.09■■□□□ 1.45
CDHR3-207ENST00000470188 RBM8AQ9Y5S9 174 aaKnown RBP24.09■■□□□ 1.45
CDHR3-207ENST00000470188 KCNJ4P48050 445 aa24.09■■□□□ 1.45
CDHR3-207ENST00000470188 ZSWIM6Q9HCJ5 1215 aa24.09■■□□□ 1.45
CDHR3-207ENST00000470188 PDRG1Q9NUG6 133 aa24.09■■□□□ 1.45
CDHR3-207ENST00000470188 CYP46A1Q9Y6A2 500 aa24.09■■□□□ 1.45
CDHR3-207ENST00000470188 RPAP1Q9BWH6 1393 aaPredicted RBP24.09■■□□□ 1.45
CDHR3-207ENST00000470188 MAP4K1Q92918 833 aa24.08■■□□□ 1.45
CDHR3-207ENST00000470188 ZKSCAN5Q9Y2L8 839 aa24.08■■□□□ 1.45
CDHR3-207ENST00000470188 NBPF26B4DH59 902 aa24.08■■□□□ 1.44
CDHR3-207ENST00000470188 ERVV-2B6SEH9 535 aa24.08■■□□□ 1.44
CDHR3-207ENST00000470188 TNNI3KQ59H18 835 aa24.08■■□□□ 1.44
CDHR3-207ENST00000470188 NBPF14Q5TI25 921 aa24.08■■□□□ 1.44
CDHR3-207ENST00000470188 NBPF10Q6P3W6 841 aaKnown RBP24.08■■□□□ 1.44
CDHR3-207ENST00000470188 LRSAM1Q6UWE0 723 aa24.08■■□□□ 1.44
CDHR3-207ENST00000470188 NBPF15Q8N660 670 aa24.08■■□□□ 1.44
CDHR3-207ENST00000470188 FPGT-TNNI3KV9GXZ4 949 aa24.08■■□□□ 1.44
CDHR3-207ENST00000470188 A0A0D9SFI3 127 aa24.07■■□□□ 1.44
CDHR3-207ENST00000470188 CASP7P55210 303 aa24.07■■□□□ 1.44
CDHR3-207ENST00000470188 TFCP2Q12800 502 aa24.07■■□□□ 1.44
CDHR3-207ENST00000470188 CREB3L3Q68CJ9 461 aa24.07■■□□□ 1.44
CDHR3-207ENST00000470188 COL5A2P05997 1499 aaPredicted RBP24.07■■□□□ 1.44
CDHR3-207ENST00000470188 SOS2Q07890 1332 aaPredicted RBP24.06■■□□□ 1.44
CDHR3-207ENST00000470188 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.06■■□□□ 1.44
CDHR3-207ENST00000470188 DBNLQ9UJU6 430 aaKnown RBP24.06■■□□□ 1.44
CDHR3-207ENST00000470188 NSFL1CQ9UNZ2 370 aaKnown RBP24.06■■□□□ 1.44
CDHR3-207ENST00000470188 TMEM63CQ9P1W3 806 aa24.06■■□□□ 1.44
CDHR3-207ENST00000470188 R3HCC1Q9Y3T6 440 aaKnown RBP24.06■■□□□ 1.44
CDHR3-207ENST00000470188 ATP5JP18859 108 aa24.05■■□□□ 1.44
CDHR3-207ENST00000470188 CCDC39Q9UFE4 941 aa24.05■■□□□ 1.44
CDHR3-207ENST00000470188 SMC3Q9UQE7 1217 aa24.05■■□□□ 1.44
CDHR3-207ENST00000470188 LARGE1O95461 756 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms