RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 ZNF385CQ66K41 422 aaPredicted RBP7.49□□□□□ -1.21
BRCA2-202ENST00000470094 ETFBKMTQ8IXQ9 262 aa7.49□□□□□ -1.21
BRCA2-202ENST00000470094 GOLGA6L1Q8N7Z2 621 aa7.49□□□□□ -1.21
BRCA2-202ENST00000470094 ABTB2Q8N961 1025 aa7.49□□□□□ -1.21
BRCA2-202ENST00000470094 HELQQ8TDG4 1101 aa7.49□□□□□ -1.21
BRCA2-202ENST00000470094 GTF3C2Q8WUA4 911 aaPredicted RBP7.49□□□□□ -1.21
BRCA2-202ENST00000470094 ACDQ96AP0 544 aa7.49□□□□□ -1.21
BRCA2-202ENST00000470094 AVENQ9NQS1 362 aaPredicted RBP7.49□□□□□ -1.21
BRCA2-202ENST00000470094 FAM181BA6NEQ2 426 aa7.48□□□□□ -1.21
BRCA2-202ENST00000470094 CELA2BP08218 269 aaPredicted RBP7.48□□□□□ -1.21
BRCA2-202ENST00000470094 BCRP11274 1271 aa7.48□□□□□ -1.21
BRCA2-202ENST00000470094 ADH6P28332 368 aa7.48□□□□□ -1.21
BRCA2-202ENST00000470094 ARID4AP29374 1257 aaPredicted RBP7.48□□□□□ -1.21
BRCA2-202ENST00000470094 GRIN2CQ14957 1233 aa7.48□□□□□ -1.21
BRCA2-202ENST00000470094 ZNF468Q5VIY5 522 aaPredicted RBP7.48□□□□□ -1.21
BRCA2-202ENST00000470094 LYPD4Q6UWN0 246 aa7.48□□□□□ -1.21
BRCA2-202ENST00000470094 WHAMMQ8TF30 809 aa7.48□□□□□ -1.21
BRCA2-202ENST00000470094 GGA1Q9UJY5 639 aa7.48□□□□□ -1.21
BRCA2-202ENST00000470094 SLCO4C1Q6ZQN7 724 aa7.47□□□□□ -1.21
BRCA2-202ENST00000470094 SLC30A3Q99726 388 aa7.47□□□□□ -1.21
BRCA2-202ENST00000470094 ENAMQ9NRM1 1142 aa7.47□□□□□ -1.21
BRCA2-202ENST00000470094 FAM13BQ9NYF5 915 aa7.47□□□□□ -1.21
BRCA2-202ENST00000470094 DNMT3AQ9Y6K1 912 aaPredicted RBP7.47□□□□□ -1.21
BRCA2-202ENST00000470094 NEURL1BA8MQ27 555 aa7.46□□□□□ -1.22
BRCA2-202ENST00000470094 OPLAHO14841 1288 aa7.46□□□□□ -1.22
BRCA2-202ENST00000470094 ABL1P00519 1130 aa7.46□□□□□ -1.22
BRCA2-202ENST00000470094 ZAP70P43403 619 aa7.46□□□□□ -1.22
BRCA2-202ENST00000470094 PCBP4P57723 403 aaKnown RBP7.46□□□□□ -1.22
BRCA2-202ENST00000470094 SYT9Q86SS6 491 aa7.46□□□□□ -1.22
BRCA2-202ENST00000470094 RGL4Q8IZJ4 473 aa7.46□□□□□ -1.22
BRCA2-202ENST00000470094 LRRC4BQ9NT99 713 aa7.46□□□□□ -1.22
BRCA2-202ENST00000470094 RTCBQ9Y3I0 505 aaKnown RBP7.46□□□□□ -1.22
BRCA2-202ENST00000470094 OIP5O43482 229 aa7.45□□□□□ -1.22
BRCA2-202ENST00000470094 MTMR3Q13615 1198 aa7.45□□□□□ -1.22
BRCA2-202ENST00000470094 CCINQ13939 588 aa7.45□□□□□ -1.22
BRCA2-202ENST00000470094 FAM26DQ5JW98 314 aa7.45□□□□□ -1.22
BRCA2-202ENST00000470094 RAB44Q7Z6P3 723 aaPredicted RBP7.45□□□□□ -1.22
BRCA2-202ENST00000470094 BHMTQ93088 406 aa7.45□□□□□ -1.22
BRCA2-202ENST00000470094 PNMA5Q96PV4 448 aa7.45□□□□□ -1.22
BRCA2-202ENST00000470094 EFCC1Q9HA90 598 aa7.45□□□□□ -1.22
BRCA2-202ENST00000470094 C11orf16Q9NQ32 467 aa7.45□□□□□ -1.22
BRCA2-202ENST00000470094 SIN3BO75182 1162 aa7.44□□□□□ -1.22
BRCA2-202ENST00000470094 BRD1O95696 1058 aa7.44□□□□□ -1.22
BRCA2-202ENST00000470094 GRNP28799 593 aaKnown RBP7.44□□□□□ -1.22
BRCA2-202ENST00000470094 ZNF211Q13398 564 aaPredicted RBP7.44□□□□□ -1.22
BRCA2-202ENST00000470094 SF3B2Q13435 895 aaKnown RBP7.44□□□□□ -1.22
BRCA2-202ENST00000470094 CMTR1Q8N1G2 835 aaKnown RBP7.44□□□□□ -1.22
BRCA2-202ENST00000470094 GALNT6Q8NCL4 622 aa7.44□□□□□ -1.22
BRCA2-202ENST00000470094 NEDD1Q8NHV4 660 aa7.44□□□□□ -1.22
BRCA2-202ENST00000470094 PIK3R5Q8WYR1 880 aa7.44□□□□□ -1.22
BRCA2-202ENST00000470094 GSX2Q9BZM3 304 aa7.44□□□□□ -1.22
BRCA2-202ENST00000470094 USP20Q9Y2K6 914 aa7.44□□□□□ -1.22
BRCA2-202ENST00000470094 ZBTB39O15060 712 aa7.43□□□□□ -1.22
BRCA2-202ENST00000470094 XYLBO75191 536 aa7.43□□□□□ -1.22
BRCA2-202ENST00000470094 FAM13AO94988 1023 aa7.43□□□□□ -1.22
BRCA2-202ENST00000470094 EPXP11678 715 aa7.43□□□□□ -1.22
BRCA2-202ENST00000470094 MPSTP25325 297 aa7.43□□□□□ -1.22
BRCA2-202ENST00000470094 SERPINB4P48594 390 aa7.43□□□□□ -1.22
BRCA2-202ENST00000470094 FKBP4Q02790 459 aaKnown RBP eCLIP7.43□□□□□ -1.22
BRCA2-202ENST00000470094 NOM1Q5C9Z4 860 aaKnown RBP7.43□□□□□ -1.22
BRCA2-202ENST00000470094 FCHSD1Q86WN1 690 aa7.43□□□□□ -1.22
BRCA2-202ENST00000470094 CCER1Q8TC90 406 aaPredicted RBP7.43□□□□□ -1.22
BRCA2-202ENST00000470094 EDARADDQ8WWZ3 215 aa7.43□□□□□ -1.22
BRCA2-202ENST00000470094 ANO2Q9NQ90 1003 aa7.43□□□□□ -1.22
BRCA2-202ENST00000470094 EGFL7Q9UHF1 273 aa7.43□□□□□ -1.22
BRCA2-202ENST00000470094 KLF15Q9UIH9 416 aa7.43□□□□□ -1.22
BRCA2-202ENST00000470094 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.43□□□□□ -1.22
BRCA2-202ENST00000470094 ARHGEF15O94989 841 aa7.42□□□□□ -1.22
BRCA2-202ENST00000470094 NFKB1P19838 968 aa7.42□□□□□ -1.22
BRCA2-202ENST00000470094 ALKBH2Q6NS38 261 aa7.42□□□□□ -1.22
BRCA2-202ENST00000470094 KRT25Q7Z3Z0 450 aa7.42□□□□□ -1.22
BRCA2-202ENST00000470094 GPR152Q8TDT2 470 aa7.42□□□□□ -1.22
BRCA2-202ENST00000470094 AMPD1P23109 780 aa7.41□□□□□ -1.22
BRCA2-202ENST00000470094 EIF1AXP47813 144 aaKnown RBP7.41□□□□□ -1.22
BRCA2-202ENST00000470094 AAMPQ13685 434 aa7.41□□□□□ -1.22
BRCA2-202ENST00000470094 C1orf229Q6ZS94 237 aaPredicted RBP7.41□□□□□ -1.22
BRCA2-202ENST00000470094 TXNDC2Q86VQ3 553 aa7.41□□□□□ -1.22
BRCA2-202ENST00000470094 ATCAYQ86WG3 371 aa7.41□□□□□ -1.22
BRCA2-202ENST00000470094 TRAIPQ9BWF2 469 aa7.41□□□□□ -1.22
BRCA2-202ENST00000470094 KCNMB2Q9Y691 235 aa7.41□□□□□ -1.22
BRCA2-202ENST00000470094 ELOA3CA0A087WX78 387 aaPredicted RBP7.4□□□□□ -1.22
BRCA2-202ENST00000470094 ELOA3DA6NLF2 546 aaPredicted RBP7.4□□□□□ -1.22
BRCA2-202ENST00000470094 SHISA8B8ZZ34 492 aa7.4□□□□□ -1.22
BRCA2-202ENST00000470094 UBAP1LF5GYI3 381 aa7.4□□□□□ -1.22
BRCA2-202ENST00000470094 H3BRB1 525 aa7.4□□□□□ -1.22
BRCA2-202ENST00000470094 ICMTO60725 284 aa7.4□□□□□ -1.22
BRCA2-202ENST00000470094 SASH3O75995 380 aa7.4□□□□□ -1.22
BRCA2-202ENST00000470094 EGFRP00533 1210 aa7.4□□□□□ -1.22
BRCA2-202ENST00000470094 PCSK2P16519 638 aa7.4□□□□□ -1.22
BRCA2-202ENST00000470094 NPR3P17342 541 aa7.4□□□□□ -1.22
BRCA2-202ENST00000470094 TBC1D8BQ0IIM8 1120 aa7.4□□□□□ -1.22
BRCA2-202ENST00000470094 ELOA3BQ3SY89 546 aa7.4□□□□□ -1.22
BRCA2-202ENST00000470094 GLYCTKQ8IVS8 523 aa7.4□□□□□ -1.22
BRCA2-202ENST00000470094 ELOA3Q8NG57 546 aa7.4□□□□□ -1.22
BRCA2-202ENST00000470094 TNFRSF25Q93038 417 aa7.4□□□□□ -1.22
BRCA2-202ENST00000470094 UBE2OQ9C0C9 1292 aaKnown RBP7.4□□□□□ -1.22
BRCA2-202ENST00000470094 TUT1Q9H6E5 874 aaKnown RBP7.4□□□□□ -1.22
BRCA2-202ENST00000470094 ADAMTS8Q9UP79 889 aa7.4□□□□□ -1.22
BRCA2-202ENST00000470094 FNDC3AQ9Y2H6 1198 aaKnown RBP7.4□□□□□ -1.22
BRCA2-202ENST00000470094 ADARB2-AS1A8MUL3 147 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms