RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 NYAP1Q6ZVC0 841 aa9.39□□□□□ -0.91
TPM3-215ENST00000469717 SPATA32Q96LK8 384 aa9.39□□□□□ -0.91
TPM3-215ENST00000469717 FAM53CQ9NYF3 392 aa9.39□□□□□ -0.91
TPM3-215ENST00000469717 TSPYL4Q9UJ04 414 aa9.39□□□□□ -0.91
TPM3-215ENST00000469717 SSH2Q76I76 1423 aa9.38□□□□□ -0.91
TPM3-215ENST00000469717 EIF4A2Q14240 407 aaKnown RBP9.38□□□□□ -0.91
TPM3-215ENST00000469717 NFATC2IPQ8NCF5 419 aa9.38□□□□□ -0.91
TPM3-215ENST00000469717 TDRD7Q8NHU6 1098 aaKnown RBP9.38□□□□□ -0.91
TPM3-215ENST00000469717 KIF20BQ96Q89 1820 aa9.38□□□□□ -0.91
TPM3-215ENST00000469717 TULP2O00295 520 aa9.38□□□□□ -0.91
TPM3-215ENST00000469717 SEC31AO94979 1220 aaKnown RBP9.38□□□□□ -0.91
TPM3-215ENST00000469717 CLCN6P51797 869 aa9.38□□□□□ -0.91
TPM3-215ENST00000469717 ST5P78524 1137 aa9.38□□□□□ -0.91
TPM3-215ENST00000469717 CCZ1BP86790 482 aa9.38□□□□□ -0.91
TPM3-215ENST00000469717 CCZ1P86791 482 aaPredicted RBP9.38□□□□□ -0.91
TPM3-215ENST00000469717 FHOD1Q9Y613 1164 aa9.38□□□□□ -0.91
TPM3-215ENST00000469717 NEXMIFQ5QGS0 1516 aa9.38□□□□□ -0.91
TPM3-215ENST00000469717 GYS2P54840 703 aa9.38□□□□□ -0.91
TPM3-215ENST00000469717 NLRP6P59044 892 aa9.38□□□□□ -0.91
TPM3-215ENST00000469717 RAD51AP2Q09MP3 1159 aa9.38□□□□□ -0.91
TPM3-215ENST00000469717 LEO1Q8WVC0 666 aaPredicted RBP9.38□□□□□ -0.91
TPM3-215ENST00000469717 RPGRIP1LQ68CZ1 1315 aa9.38□□□□□ -0.91
TPM3-215ENST00000469717 CCT4P50991 539 aaKnown RBP9.37□□□□□ -0.91
TPM3-215ENST00000469717 FLIIQ13045 1269 aa9.37□□□□□ -0.91
TPM3-215ENST00000469717 PTPN21Q16825 1174 aa9.37□□□□□ -0.91
TPM3-215ENST00000469717 HSP90AB2PQ58FF8 381 aa9.37□□□□□ -0.91
TPM3-215ENST00000469717 SYT10Q6XYQ8 523 aa9.37□□□□□ -0.91
TPM3-215ENST00000469717 IL17RAQ96F46 866 aa9.37□□□□□ -0.91
TPM3-215ENST00000469717 SOS1Q07889 1333 aaPredicted RBP9.37□□□□□ -0.91
TPM3-215ENST00000469717 CYP2C19P33261 490 aa9.37□□□□□ -0.91
TPM3-215ENST00000469717 PLA2G4AP47712 749 aa9.37□□□□□ -0.91
TPM3-215ENST00000469717 CPSF1Q10570 1443 aaKnown RBP9.37□□□□□ -0.91
TPM3-215ENST00000469717 CHMP4CQ96CF2 233 aa9.37□□□□□ -0.91
TPM3-215ENST00000469717 SIGLEC1Q9BZZ2 1709 aa9.37□□□□□ -0.91
TPM3-215ENST00000469717 USP44Q9H0E7 712 aa9.37□□□□□ -0.91
TPM3-215ENST00000469717 FEZ2Q9UHY8 353 aaPredicted RBP9.37□□□□□ -0.91
TPM3-215ENST00000469717 POGZQ7Z3K3 1410 aa9.37□□□□□ -0.91
TPM3-215ENST00000469717 JAK2O60674 1132 aa9.37□□□□□ -0.91
TPM3-215ENST00000469717 PPP1R42Q7Z4L9 355 aa9.37□□□□□ -0.91
TPM3-215ENST00000469717 KIF1BPQ96EK5 621 aa9.37□□□□□ -0.91
TPM3-215ENST00000469717 CLSTN2Q9H4D0 955 aa9.37□□□□□ -0.91
TPM3-215ENST00000469717 KIDINS220Q9ULH0 1771 aa9.37□□□□□ -0.91
TPM3-215ENST00000469717 NUTM2BA6NNL0 878 aaPredicted RBP9.36□□□□□ -0.91
TPM3-215ENST00000469717 NUTM2EB1AL46 878 aaPredicted RBP9.36□□□□□ -0.91
TPM3-215ENST00000469717 TRIM66O15016 1216 aa9.36□□□□□ -0.91
TPM3-215ENST00000469717 SLU7O95391 586 aaKnown RBP9.36□□□□□ -0.91
TPM3-215ENST00000469717 NUTM2AQ8IVF1 878 aaPredicted RBP9.36□□□□□ -0.91
TPM3-215ENST00000469717 CCAR2Q8N163 923 aaKnown RBP9.36□□□□□ -0.91
TPM3-215ENST00000469717 CALCOCO1Q9P1Z2 691 aa9.36□□□□□ -0.91
TPM3-215ENST00000469717 LCMT1Q9UIC8 334 aa9.36□□□□□ -0.91
TPM3-215ENST00000469717 CDK12Q9NYV4 1490 aaPredicted RBP9.36□□□□□ -0.91
TPM3-215ENST00000469717 RAB11FIP3O75154 756 aa9.36□□□□□ -0.91
TPM3-215ENST00000469717 PNMA6AP0CW24 399 aaPredicted RBP9.36□□□□□ -0.91
TPM3-215ENST00000469717 IQCB1Q15051 598 aa9.36□□□□□ -0.91
TPM3-215ENST00000469717 ERO1AQ96HE7 468 aa9.36□□□□□ -0.91
TPM3-215ENST00000469717 AMOTL2Q9Y2J4 779 aa9.36□□□□□ -0.91
TPM3-215ENST00000469717 ARAP3Q8WWN8 1544 aa9.36□□□□□ -0.91
TPM3-215ENST00000469717 TTC21AQ8NDW8 1320 aa9.36□□□□□ -0.91
TPM3-215ENST00000469717 ARHGAP29Q52LW3 1261 aa9.36□□□□□ -0.91
TPM3-215ENST00000469717 RHPN1Q8TCX5 695 aa9.36□□□□□ -0.91
TPM3-215ENST00000469717 COG3Q96JB2 828 aa9.36□□□□□ -0.91
TPM3-215ENST00000469717 DNAJC2Q99543 621 aaKnown RBP9.36□□□□□ -0.91
TPM3-215ENST00000469717 FAM227BQ96M60 508 aa9.35□□□□□ -0.91
TPM3-215ENST00000469717 PHAXQ9H814 394 aaKnown RBP9.35□□□□□ -0.91
TPM3-215ENST00000469717 CYP46A1Q9Y6A2 500 aa9.35□□□□□ -0.91
TPM3-215ENST00000469717 GOLGA6L19H0YKK7 550 aa9.35□□□□□ -0.91
TPM3-215ENST00000469717 ABTB2Q8N961 1025 aa9.35□□□□□ -0.91
TPM3-215ENST00000469717 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.35□□□□□ -0.91
TPM3-215ENST00000469717 PREX1Q8TCU6 1659 aa9.35□□□□□ -0.91
TPM3-215ENST00000469717 NBPF7P0C2Y1 421 aaPredicted RBP9.35□□□□□ -0.91
TPM3-215ENST00000469717 E4F1Q66K89 784 aaPredicted RBP9.35□□□□□ -0.91
TPM3-215ENST00000469717 CNPY4Q8N129 248 aa9.35□□□□□ -0.91
TPM3-215ENST00000469717 ATP7BP35670 1465 aa9.35□□□□□ -0.91
TPM3-215ENST00000469717 FANCGO15287 622 aa9.34□□□□□ -0.91
TPM3-215ENST00000469717 SRGAP3O43295 1099 aa9.34□□□□□ -0.91
TPM3-215ENST00000469717 UBTFL1P0CB47 393 aaPredicted RBP9.34□□□□□ -0.91
TPM3-215ENST00000469717 H2AFXP16104 143 aaPredicted RBP9.34□□□□□ -0.91
TPM3-215ENST00000469717 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.34□□□□□ -0.91
TPM3-215ENST00000469717 TSPOAP1O95153 1857 aa9.34□□□□□ -0.91
TPM3-215ENST00000469717 VPS53Q5VIR6 699 aa9.34□□□□□ -0.91
TPM3-215ENST00000469717 SMARCE1Q969G3 411 aa9.34□□□□□ -0.91
TPM3-215ENST00000469717 CCDC34Q96HJ3 373 aa9.34□□□□□ -0.91
TPM3-215ENST00000469717 ZSWIM6Q9HCJ5 1215 aa9.34□□□□□ -0.91
TPM3-215ENST00000469717 CPS1P31327 1500 aa9.34□□□□□ -0.91
TPM3-215ENST00000469717 CCDC171Q6TFL3 1326 aa9.34□□□□□ -0.91
TPM3-215ENST00000469717 MYO5BQ9ULV0 1848 aa9.34□□□□□ -0.91
TPM3-215ENST00000469717 GNAI3P08754 354 aa9.34□□□□□ -0.91
TPM3-215ENST00000469717 MTHFSDQ2M296 383 aaKnown RBP9.34□□□□□ -0.91
TPM3-215ENST00000469717 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.34□□□□□ -0.91
TPM3-215ENST00000469717 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.34□□□□□ -0.91
TPM3-215ENST00000469717 CNTROBQ8N137 903 aa9.34□□□□□ -0.91
TPM3-215ENST00000469717 AOPEPQ8N6M6 819 aa9.34□□□□□ -0.91
TPM3-215ENST00000469717 STK31Q9BXU1 1019 aa9.34□□□□□ -0.91
TPM3-215ENST00000469717 RBM8AQ9Y5S9 174 aaKnown RBP9.34□□□□□ -0.91
TPM3-215ENST00000469717 NPHP3Q7Z494 1330 aa9.34□□□□□ -0.91
TPM3-215ENST00000469717 CRB1P82279 1406 aa9.34□□□□□ -0.91
TPM3-215ENST00000469717 ANXA1P04083 346 aa9.34□□□□□ -0.92
TPM3-215ENST00000469717 GOLGA8FQ08AF8 430 aa9.34□□□□□ -0.92
TPM3-215ENST00000469717 GOLGA8DPQ0D2H9 430 aa9.34□□□□□ -0.92
TPM3-215ENST00000469717 RBM43Q6ZSC3 357 aaKnown RBP9.34□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms