RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 TRAPPC3LQ5T215 181 aa15.94■□□□□ 0.14
TRAF4-208ENST00000469529 NLRP10Q86W26 655 aa15.94■□□□□ 0.14
TRAF4-208ENST00000469529 PLA2G12BQ9BX93 195 aa15.94■□□□□ 0.14
TRAF4-208ENST00000469529 PPP1R1BQ9UD71 204 aaPredicted RBP15.94■□□□□ 0.14
TRAF4-208ENST00000469529 LRRFIP2Q9Y608 721 aaKnown RBP15.94■□□□□ 0.14
TRAF4-208ENST00000469529 N4BP2Q86UW6 1770 aaPredicted RBP15.94■□□□□ 0.14
TRAF4-208ENST00000469529 GNPATO15228 680 aa15.93■□□□□ 0.14
TRAF4-208ENST00000469529 ZBTB7AO95365 584 aa15.93■□□□□ 0.14
TRAF4-208ENST00000469529 POLA2Q14181 598 aa15.93■□□□□ 0.14
TRAF4-208ENST00000469529 RABL6Q3YEC7 729 aaPredicted RBP15.93■□□□□ 0.14
TRAF4-208ENST00000469529 ZBTB38Q8NAP3 1195 aaPredicted RBP15.93■□□□□ 0.14
TRAF4-208ENST00000469529 ARHGEF1Q92888 912 aaKnown RBP15.93■□□□□ 0.14
TRAF4-208ENST00000469529 AKT1S1Q96B36 256 aa15.93■□□□□ 0.14
TRAF4-208ENST00000469529 KAZALD1Q96I82 304 aa15.93■□□□□ 0.14
TRAF4-208ENST00000469529 AK7Q96M32 723 aa15.93■□□□□ 0.14
TRAF4-208ENST00000469529 ZNF330Q9Y3S2 320 aaPredicted RBP15.93■□□□□ 0.14
TRAF4-208ENST00000469529 FLAD1Q8NFF5 587 aa15.92■□□□□ 0.14
TRAF4-208ENST00000469529 C1orf115Q9H7X2 142 aa15.92■□□□□ 0.14
TRAF4-208ENST00000469529 MYH14Q7Z406 1995 aaKnown RBP15.92■□□□□ 0.14
TRAF4-208ENST00000469529 CDHR2Q9BYE9 1310 aa15.92■□□□□ 0.14
TRAF4-208ENST00000469529 BCL2L12Q9HB09 334 aa15.91■□□□□ 0.14
TRAF4-208ENST00000469529 ATF5Q9Y2D1 282 aaPredicted RBP15.91■□□□□ 0.14
TRAF4-208ENST00000469529 ZPR1O75312 459 aa15.9■□□□□ 0.14
TRAF4-208ENST00000469529 HSP90B1P14625 803 aaKnown RBP15.9■□□□□ 0.14
TRAF4-208ENST00000469529 SUCLG2Q96I99 432 aa15.9■□□□□ 0.14
TRAF4-208ENST00000469529 ARXQ96QS3 562 aa15.9■□□□□ 0.14
TRAF4-208ENST00000469529 NOP58Q9Y2X3 529 aaKnown RBP15.9■□□□□ 0.14
TRAF4-208ENST00000469529 RFC4P35249 363 aa15.89■□□□□ 0.13
TRAF4-208ENST00000469529 UBE3BQ7Z3V4 1068 aa15.89■□□□□ 0.13
TRAF4-208ENST00000469529 PPP1R42Q7Z4L9 355 aa15.89■□□□□ 0.13
TRAF4-208ENST00000469529 MTFR1LQ9H019 292 aa15.89■□□□□ 0.13
TRAF4-208ENST00000469529 USP42Q9H9J4 1324 aaKnown RBP15.89■□□□□ 0.13
TRAF4-208ENST00000469529 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.88■□□□□ 0.13
TRAF4-208ENST00000469529 PNMA6EA0A0J9YXQ4 647 aa15.88■□□□□ 0.13
TRAF4-208ENST00000469529 CSF1RP07333 972 aa15.88■□□□□ 0.13
TRAF4-208ENST00000469529 FOXO4P98177 505 aa15.88■□□□□ 0.13
TRAF4-208ENST00000469529 NUCB1Q02818 461 aa15.88■□□□□ 0.13
TRAF4-208ENST00000469529 SLC10A5Q5PT55 438 aa15.88■□□□□ 0.13
TRAF4-208ENST00000469529 AMIGO3Q86WK7 504 aa15.88■□□□□ 0.13
TRAF4-208ENST00000469529 C4BP0C0L5 1744 aa15.88■□□□□ 0.13
TRAF4-208ENST00000469529 PTGER2P43116 358 aa15.87■□□□□ 0.13
TRAF4-208ENST00000469529 HSP90AB4PQ58FF6 505 aa15.87■□□□□ 0.13
TRAF4-208ENST00000469529 UTP14AQ9BVJ6 771 aaKnown RBP15.87■□□□□ 0.13
TRAF4-208ENST00000469529 BICC1Q9H694 974 aaKnown RBP15.87■□□□□ 0.13
TRAF4-208ENST00000469529 TFCP2L1Q9NZI6 479 aa15.87■□□□□ 0.13
TRAF4-208ENST00000469529 UBN2Q6ZU65 1347 aa15.87■□□□□ 0.13
TRAF4-208ENST00000469529 ARFGEF2Q9Y6D5 1785 aa15.87■□□□□ 0.13
TRAF4-208ENST00000469529 SRGAP3O43295 1099 aa15.86■□□□□ 0.13
TRAF4-208ENST00000469529 RAB11FIP3O75154 756 aa15.86■□□□□ 0.13
TRAF4-208ENST00000469529 EPHA10Q5JZY3 1008 aa15.86■□□□□ 0.13
TRAF4-208ENST00000469529 SUSD4Q5VX71 490 aa15.86■□□□□ 0.13
TRAF4-208ENST00000469529 USPL1Q5W0Q7 1092 aa15.86■□□□□ 0.13
TRAF4-208ENST00000469529 TRMT112Q9UI30 125 aaKnown RBP15.86■□□□□ 0.13
TRAF4-208ENST00000469529 NIP7Q9Y221 180 aaKnown RBP eCLIP15.86■□□□□ 0.13
TRAF4-208ENST00000469529 QSER1Q2KHR3 1735 aa15.85■□□□□ 0.13
TRAF4-208ENST00000469529 TAF1LQ8IZX4 1826 aa15.85■□□□□ 0.13
TRAF4-208ENST00000469529 COPRSQ9NQ92 184 aa15.85■□□□□ 0.13
TRAF4-208ENST00000469529 PNPLA7Q6ZV29 1317 aa15.85■□□□□ 0.13
TRAF4-208ENST00000469529 NTSR2O95665 410 aa15.84■□□□□ 0.13
TRAF4-208ENST00000469529 GPTP24298 496 aa15.84■□□□□ 0.13
TRAF4-208ENST00000469529 TM4SF1P30408 202 aa15.84■□□□□ 0.13
TRAF4-208ENST00000469529 RFX5P48382 616 aaPredicted RBP15.84■□□□□ 0.13
TRAF4-208ENST00000469529 SLC16A10Q8TF71 515 aa15.84■□□□□ 0.13
TRAF4-208ENST00000469529 FAM89AQ96GI7 184 aa15.84■□□□□ 0.13
TRAF4-208ENST00000469529 SETDB2Q96T68 719 aa15.84■□□□□ 0.13
TRAF4-208ENST00000469529 NYXQ9GZU5 481 aa15.84■□□□□ 0.13
TRAF4-208ENST00000469529 FBXO3Q9UK99 471 aa15.84■□□□□ 0.13
TRAF4-208ENST00000469529 PDZRN3Q9UPQ7 1066 aa15.84■□□□□ 0.13
TRAF4-208ENST00000469529 SH3TC1Q8TE82 1336 aa15.84■□□□□ 0.13
TRAF4-208ENST00000469529 TUBGCP6Q96RT7 1819 aa15.83■□□□□ 0.12
TRAF4-208ENST00000469529 IRS4O14654 1257 aaPredicted RBP15.83■□□□□ 0.12
TRAF4-208ENST00000469529 PDE8AO60658 829 aa15.83■□□□□ 0.12
TRAF4-208ENST00000469529 GYS1P13807 737 aa15.83■□□□□ 0.12
TRAF4-208ENST00000469529 TBC1D9BQ66K14 1250 aa15.83■□□□□ 0.12
TRAF4-208ENST00000469529 LMBR1LQ6UX01 489 aa15.83■□□□□ 0.12
TRAF4-208ENST00000469529 TPTE2Q6XPS3 522 aa15.83■□□□□ 0.12
TRAF4-208ENST00000469529 CHD1LQ86WJ1 897 aa15.83■□□□□ 0.12
TRAF4-208ENST00000469529 NLGN1Q8N2Q7 840 aa15.83■□□□□ 0.12
TRAF4-208ENST00000469529 SGIP1Q9BQI5 828 aa15.83■□□□□ 0.12
TRAF4-208ENST00000469529 SRP68Q9UHB9 627 aaKnown RBP15.83■□□□□ 0.12
TRAF4-208ENST00000469529 PELP1Q8IZL8 1130 aaKnown RBP15.82■□□□□ 0.12
TRAF4-208ENST00000469529 TTLL11Q8NHH1 800 aa15.82■□□□□ 0.12
TRAF4-208ENST00000469529 COL23A1Q86Y22 540 aaPredicted RBP15.81■□□□□ 0.12
TRAF4-208ENST00000469529 RTL9Q8NET4 1388 aa15.8■□□□□ 0.12
TRAF4-208ENST00000469529 MSH5O43196 834 aa15.8■□□□□ 0.12
TRAF4-208ENST00000469529 SURF6O75683 361 aaKnown RBP15.8■□□□□ 0.12
TRAF4-208ENST00000469529 PTPN12Q05209 780 aaKnown RBP15.8■□□□□ 0.12
TRAF4-208ENST00000469529 NFIXQ14938 502 aa15.8■□□□□ 0.12
TRAF4-208ENST00000469529 SF3B3Q15393 1217 aaKnown RBP15.8■□□□□ 0.12
TRAF4-208ENST00000469529 ANKRD45Q5TZF3 282 aa15.8■□□□□ 0.12
TRAF4-208ENST00000469529 SMIM5Q71RC9 77 aa15.8■□□□□ 0.12
TRAF4-208ENST00000469529 ERC1Q8IUD2 1116 aa15.8■□□□□ 0.12
TRAF4-208ENST00000469529 JARID2Q92833 1246 aaPredicted RBP15.8■□□□□ 0.12
TRAF4-208ENST00000469529 NUP98P52948 1817 aa15.8■□□□□ 0.12
TRAF4-208ENST00000469529 PHF14O94880 888 aa15.79■□□□□ 0.12
TRAF4-208ENST00000469529 CTSWP56202 376 aa15.79■□□□□ 0.12
TRAF4-208ENST00000469529 SYNE4Q8N205 404 aa15.79■□□□□ 0.12
TRAF4-208ENST00000469529 KIF1BPQ96EK5 621 aa15.79■□□□□ 0.12
TRAF4-208ENST00000469529 LRRCC1Q9C099 1032 aa15.79■□□□□ 0.12
TRAF4-208ENST00000469529 FHDC1Q9C0D6 1143 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 206.1 ms