RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 HYPKQ9NX55 129 aa23.68■■□□□ 1.38
PHGDH-204ENST00000469443 ELL2O00472 640 aaPredicted RBP23.67■■□□□ 1.38
PHGDH-204ENST00000469443 ALDH1B1P30837 517 aa23.67■■□□□ 1.38
PHGDH-204ENST00000469443 TCIRG1Q13488 830 aa23.67■■□□□ 1.38
PHGDH-204ENST00000469443 C7orf43Q8WVR3 580 aa23.67■■□□□ 1.38
PHGDH-204ENST00000469443 UTP14AQ9BVJ6 771 aaKnown RBP23.67■■□□□ 1.38
PHGDH-204ENST00000469443 C8orf58Q8NAV2 365 aa23.66■■□□□ 1.38
PHGDH-204ENST00000469443 PLBD2Q8NHP8 589 aa23.66■■□□□ 1.38
PHGDH-204ENST00000469443 RNF123Q5XPI4 1314 aa23.65■■□□□ 1.38
PHGDH-204ENST00000469443 KDM2BQ8NHM5 1336 aa23.65■■□□□ 1.38
PHGDH-204ENST00000469443 CCDC93Q567U6 631 aa23.65■■□□□ 1.38
PHGDH-204ENST00000469443 ANKRD13DQ6ZTN6 518 aa23.65■■□□□ 1.38
PHGDH-204ENST00000469443 NLRP10Q86W26 655 aa23.65■■□□□ 1.38
PHGDH-204ENST00000469443 TAOK3Q9H2K8 898 aa23.65■■□□□ 1.38
PHGDH-204ENST00000469443 NMRK2Q9NPI5 230 aa23.65■■□□□ 1.38
PHGDH-204ENST00000469443 RPGRQ92834 1020 aaKnown RBP23.64■■□□□ 1.37
PHGDH-204ENST00000469443 CHMP4AQ9BY43 222 aa23.64■■□□□ 1.37
PHGDH-204ENST00000469443 IL16Q14005 1332 aa23.63■■□□□ 1.37
PHGDH-204ENST00000469443 HOXA10P31260 410 aaPredicted RBP23.63■■□□□ 1.37
PHGDH-204ENST00000469443 SLC10A5Q5PT55 438 aa23.63■■□□□ 1.37
PHGDH-204ENST00000469443 TSR2Q969E8 191 aaKnown RBP23.63■■□□□ 1.37
PHGDH-204ENST00000469443 CACNA1FO60840 1977 aa23.63■■□□□ 1.37
PHGDH-204ENST00000469443 DDX60Q8IY21 1712 aaKnown RBP23.62■■□□□ 1.37
PHGDH-204ENST00000469443 NLRP3Q96P20 1036 aa23.62■■□□□ 1.37
PHGDH-204ENST00000469443 FAM9BQ8IZU0 186 aa23.61■■□□□ 1.37
PHGDH-204ENST00000469443 TSPYL6Q8N831 410 aa23.61■■□□□ 1.37
PHGDH-204ENST00000469443 CCDC30Q5VVM6 783 aa23.6■■□□□ 1.37
PHGDH-204ENST00000469443 C3orf67Q6ZVT6 689 aa23.6■■□□□ 1.37
PHGDH-204ENST00000469443 RBM17Q96I25 401 aaKnown RBP23.6■■□□□ 1.37
PHGDH-204ENST00000469443 CRAMP1Q96RY5 1269 aa23.6■■□□□ 1.37
PHGDH-204ENST00000469443 ISCA1Q9BUE6 129 aa23.6■■□□□ 1.37
PHGDH-204ENST00000469443 PHAXQ9H814 394 aaKnown RBP23.6■■□□□ 1.37
PHGDH-204ENST00000469443 TRMT112Q9UI30 125 aaKnown RBP23.6■■□□□ 1.37
PHGDH-204ENST00000469443 GLTPD2A6NH11 291 aa23.59■■□□□ 1.37
PHGDH-204ENST00000469443 OLFM4Q6UX06 510 aa23.59■■□□□ 1.37
PHGDH-204ENST00000469443 RTKN2Q8IZC4 609 aa23.59■■□□□ 1.37
PHGDH-204ENST00000469443 SH3TC1Q8TE82 1336 aa23.59■■□□□ 1.37
PHGDH-204ENST00000469443 TAF1P21675 1872 aa23.58■■□□□ 1.37
PHGDH-204ENST00000469443 TOMM70O94826 608 aa23.58■■□□□ 1.37
PHGDH-204ENST00000469443 FKBP4Q02790 459 aaKnown RBP eCLIP23.58■■□□□ 1.37
PHGDH-204ENST00000469443 GOLGA2Q08379 1002 aa23.58■■□□□ 1.37
PHGDH-204ENST00000469443 WDR63Q8IWG1 891 aa23.58■■□□□ 1.37
PHGDH-204ENST00000469443 SALL2Q9Y467 1007 aaPredicted RBP23.58■■□□□ 1.37
PHGDH-204ENST00000469443 WDR90Q96KV7 1748 aa23.57■■□□□ 1.36
PHGDH-204ENST00000469443 RIC3Q7Z5B4 369 aa23.57■■□□□ 1.36
PHGDH-204ENST00000469443 RRAGCQ9HB90 399 aa23.57■■□□□ 1.36
PHGDH-204ENST00000469443 SNED1Q8TER0 1413 aa23.57■■□□□ 1.36
PHGDH-204ENST00000469443 ATP5J2-PTCD1G3V325 749 aa23.56■■□□□ 1.36
PHGDH-204ENST00000469443 HCLS1P14317 486 aaPredicted RBP23.56■■□□□ 1.36
PHGDH-204ENST00000469443 CC2D2BQ6DHV5 1058 aa23.56■■□□□ 1.36
PHGDH-204ENST00000469443 SYNE4Q8N205 404 aa23.56■■□□□ 1.36
PHGDH-204ENST00000469443 TRIM28Q13263 835 aaKnown RBP23.55■■□□□ 1.36
PHGDH-204ENST00000469443 TWISTNBQ3B726 338 aaPredicted RBP23.55■■□□□ 1.36
PHGDH-204ENST00000469443 DPY19L2Q6NUT2 758 aa23.54■■□□□ 1.36
PHGDH-204ENST00000469443 C16orf71Q8IYS4 520 aaPredicted RBP23.54■■□□□ 1.36
PHGDH-204ENST00000469443 FANCIQ9NVI1 1328 aa23.54■■□□□ 1.36
PHGDH-204ENST00000469443 PPEF1O14829 653 aaPredicted RBP23.53■■□□□ 1.36
PHGDH-204ENST00000469443 DDX58O95786 925 aaKnown RBP23.53■■□□□ 1.36
PHGDH-204ENST00000469443 ZNF428Q96B54 188 aa23.53■■□□□ 1.36
PHGDH-204ENST00000469443 STK31Q9BXU1 1019 aa23.53■■□□□ 1.36
PHGDH-204ENST00000469443 ZNF277Q9NRM2 450 aaPredicted RBP23.53■■□□□ 1.36
PHGDH-204ENST00000469443 ABCC4O15439 1325 aa23.53■■□□□ 1.36
PHGDH-204ENST00000469443 GRIPAP1Q4V328 841 aa23.52■■□□□ 1.36
PHGDH-204ENST00000469443 RBM46Q8TBY0 533 aaKnown RBP23.52■■□□□ 1.36
PHGDH-204ENST00000469443 FAM89AQ96GI7 184 aa23.52■■□□□ 1.36
PHGDH-204ENST00000469443 PSMD1Q99460 953 aa23.52■■□□□ 1.36
PHGDH-204ENST00000469443 MYD88Q99836 296 aa23.51■■□□□ 1.35
PHGDH-204ENST00000469443 VEGFAP15692 232 aaPredicted RBP23.5■■□□□ 1.35
PHGDH-204ENST00000469443 HSPA6P17066 643 aa23.5■■□□□ 1.35
PHGDH-204ENST00000469443 IARSP41252 1262 aaKnown RBP23.5■■□□□ 1.35
PHGDH-204ENST00000469443 DDX46Q7L014 1031 aaKnown RBP23.5■■□□□ 1.35
PHGDH-204ENST00000469443 SCN4AP35499 1836 aa23.49■■□□□ 1.35
PHGDH-204ENST00000469443 TCERG1O14776 1098 aaKnown RBP23.49■■□□□ 1.35
PHGDH-204ENST00000469443 METTL22Q9BUU2 404 aaPredicted RBP23.49■■□□□ 1.35
PHGDH-204ENST00000469443 ATP6V0A2Q9Y487 856 aa23.49■■□□□ 1.35
PHGDH-204ENST00000469443 BBOX1O75936 387 aa23.48■■□□□ 1.35
PHGDH-204ENST00000469443 KSR2Q6VAB6 950 aa23.48■■□□□ 1.35
PHGDH-204ENST00000469443 CCDC191Q8NCU4 936 aa23.48■■□□□ 1.35
PHGDH-204ENST00000469443 TMX4Q9H1E5 349 aaPredicted RBP23.48■■□□□ 1.35
PHGDH-204ENST00000469443 MYH3P11055 1940 aa23.48■■□□□ 1.35
PHGDH-204ENST00000469443 LRRC37AA6NMS7 1700 aa23.47■■□□□ 1.35
PHGDH-204ENST00000469443 GRAPQ13588 217 aa23.47■■□□□ 1.35
PHGDH-204ENST00000469443 SF3B3Q15393 1217 aaKnown RBP23.47■■□□□ 1.35
PHGDH-204ENST00000469443 RTL5Q5HYW3 569 aaPredicted RBP23.47■■□□□ 1.35
PHGDH-204ENST00000469443 SLC51AQ86UW1 340 aa23.47■■□□□ 1.35
PHGDH-204ENST00000469443 ZBTB38Q8NAP3 1195 aaPredicted RBP23.47■■□□□ 1.35
PHGDH-204ENST00000469443 GRAPLQ8TC17 118 aaPredicted RBP23.47■■□□□ 1.35
PHGDH-204ENST00000469443 SPINK5Q9NQ38 1064 aaPredicted RBP23.47■■□□□ 1.35
PHGDH-204ENST00000469443 MAP3K2Q9Y2U5 619 aa23.47■■□□□ 1.35
PHGDH-204ENST00000469443 PI4KAP2A4QPH2 592 aa23.46■■□□□ 1.35
PHGDH-204ENST00000469443 POTECB2RU33 542 aa23.46■■□□□ 1.35
PHGDH-204ENST00000469443 IRS4O14654 1257 aaPredicted RBP23.46■■□□□ 1.35
PHGDH-204ENST00000469443 DDNO94850 711 aaPredicted RBP23.46■■□□□ 1.35
PHGDH-204ENST00000469443 SLC4A2P04920 1241 aa23.46■■□□□ 1.35
PHGDH-204ENST00000469443 EXOSC9Q06265 439 aaKnown RBP23.46■■□□□ 1.35
PHGDH-204ENST00000469443 PI4KAP1Q8N8J0 262 aa23.46■■□□□ 1.35
PHGDH-204ENST00000469443 VAMP4O75379 141 aa23.45■■□□□ 1.34
PHGDH-204ENST00000469443 FSTL1Q12841 308 aa23.45■■□□□ 1.34
PHGDH-204ENST00000469443 G2E3Q7L622 706 aa23.45■■□□□ 1.34
PHGDH-204ENST00000469443 SP8Q8IXZ3 490 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms