RNA–Protein interactions for RNA: ENST00000469420.1

CBX6-203, Transcript of chromobox 6, humanhuman

TSL 2

Gene CBX6, Length 2,213 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-203ENST00000469420 G3BP1Q13283 466 aaKnown RBP eCLIP20.46■□□□□ 0.87
CBX6-203ENST00000469420 EPHA10Q5JZY3 1008 aa20.46■□□□□ 0.87
CBX6-203ENST00000469420 COPS6Q7L5N1 327 aa20.46■□□□□ 0.87
CBX6-203ENST00000469420 CADPS2Q86UW7 1296 aa20.46■□□□□ 0.87
CBX6-203ENST00000469420 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.46■□□□□ 0.87
CBX6-203ENST00000469420 NEURL1BA8MQ27 555 aa20.46■□□□□ 0.87
CBX6-203ENST00000469420 GADD45BO75293 160 aaPredicted RBP20.46■□□□□ 0.87
CBX6-203ENST00000469420 FAM227BQ96M60 508 aa20.46■□□□□ 0.87
CBX6-203ENST00000469420 JAKMIP1Q96N16 626 aaKnown RBP20.46■□□□□ 0.87
CBX6-203ENST00000469420 CCDC171Q6TFL3 1326 aa20.45■□□□□ 0.86
CBX6-203ENST00000469420 LARP1Q6PKG0 1096 aaKnown RBP20.45■□□□□ 0.86
CBX6-203ENST00000469420 JARID2Q92833 1246 aaPredicted RBP20.45■□□□□ 0.86
CBX6-203ENST00000469420 NAP1L5Q96NT1 182 aaPredicted RBP20.45■□□□□ 0.86
CBX6-203ENST00000469420 MYD88Q99836 296 aa20.45■□□□□ 0.86
CBX6-203ENST00000469420 LAMB4A4D0S4 1761 aa20.45■□□□□ 0.86
CBX6-203ENST00000469420 PARP4Q9UKK3 1724 aaKnown RBP20.44■□□□□ 0.86
CBX6-203ENST00000469420 NEXNQ0ZGT2 675 aa20.44■□□□□ 0.86
CBX6-203ENST00000469420 USP48Q86UV5 1035 aa20.44■□□□□ 0.86
CBX6-203ENST00000469420 NMIQ13287 307 aaPredicted RBP20.43■□□□□ 0.86
CBX6-203ENST00000469420 GCKRQ14397 625 aa20.43■□□□□ 0.86
CBX6-203ENST00000469420 DDX54Q8TDD1 881 aaKnown RBP20.43■□□□□ 0.86
CBX6-203ENST00000469420 DCAF5Q96JK2 942 aa20.43■□□□□ 0.86
CBX6-203ENST00000469420 CPDO75976 1380 aa20.43■□□□□ 0.86
CBX6-203ENST00000469420 DTNBO60941 627 aa20.43■□□□□ 0.86
CBX6-203ENST00000469420 BRINP3Q76B58 766 aa20.43■□□□□ 0.86
CBX6-203ENST00000469420 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.43■□□□□ 0.86
CBX6-203ENST00000469420 CCDC83Q8IWF9 413 aa20.42■□□□□ 0.86
CBX6-203ENST00000469420 BOLA2Q9H3K6 86 aa20.42■□□□□ 0.86
CBX6-203ENST00000469420 PDRG1Q9NUG6 133 aa20.42■□□□□ 0.86
CBX6-203ENST00000469420 ZSCAN22P10073 491 aaPredicted RBP20.42■□□□□ 0.86
CBX6-203ENST00000469420 SYT1P21579 422 aa20.42■□□□□ 0.86
CBX6-203ENST00000469420 NECTIN1Q15223 517 aa20.42■□□□□ 0.86
CBX6-203ENST00000469420 KCNB2Q92953 911 aa20.42■□□□□ 0.86
CBX6-203ENST00000469420 METTL22Q9BUU2 404 aaPredicted RBP20.42■□□□□ 0.86
CBX6-203ENST00000469420 SMC3Q9UQE7 1217 aa20.42■□□□□ 0.86
CBX6-203ENST00000469420 RBM8AQ9Y5S9 174 aaKnown RBP20.42■□□□□ 0.86
CBX6-203ENST00000469420 STRCQ7RTU9 1775 aa20.42■□□□□ 0.86
CBX6-203ENST00000469420 SHANK3Q9BYB0 1731 aa20.41■□□□□ 0.86
CBX6-203ENST00000469420 STX6O43752 255 aa20.41■□□□□ 0.86
CBX6-203ENST00000469420 VPS53Q5VIR6 699 aa20.41■□□□□ 0.86
CBX6-203ENST00000469420 ZSCAN30Q86W11 494 aa20.41■□□□□ 0.86
CBX6-203ENST00000469420 PDLIM2Q96JY6 352 aa20.41■□□□□ 0.86
CBX6-203ENST00000469420 ZSWIM6Q9HCJ5 1215 aa20.41■□□□□ 0.86
CBX6-203ENST00000469420 CNPY2Q9Y2B0 182 aa20.41■□□□□ 0.86
CBX6-203ENST00000469420 A0A0D9SFI3 127 aa20.41■□□□□ 0.86
CBX6-203ENST00000469420 RNF214Q8ND24 703 aa20.41■□□□□ 0.86
CBX6-203ENST00000469420 CYP46A1Q9Y6A2 500 aa20.41■□□□□ 0.86
CBX6-203ENST00000469420 SNRPA1P09661 255 aaKnown RBP20.4■□□□□ 0.86
CBX6-203ENST00000469420 CREB3L3Q68CJ9 461 aa20.4■□□□□ 0.86
CBX6-203ENST00000469420 FSD1Q9BTV5 496 aa20.4■□□□□ 0.86
CBX6-203ENST00000469420 TM6SF1Q9BZW5 370 aa20.4■□□□□ 0.86
CBX6-203ENST00000469420 UBR2Q8IWV8 1755 aa20.4■□□□□ 0.86
CBX6-203ENST00000469420 ABCA3Q99758 1704 aa20.4■□□□□ 0.86
CBX6-203ENST00000469420 ST3GAL1Q11201 340 aa20.39■□□□□ 0.86
CBX6-203ENST00000469420 COL9A3Q14050 684 aaPredicted RBP20.39■□□□□ 0.86
CBX6-203ENST00000469420 TMEM87AQ8NBN3 555 aa20.39■□□□□ 0.86
CBX6-203ENST00000469420 SYAP1Q96A49 352 aaPredicted RBP20.39■□□□□ 0.86
CBX6-203ENST00000469420 HIP1O00291 1037 aa20.39■□□□□ 0.85
CBX6-203ENST00000469420 KCNJ4P48050 445 aa20.39■□□□□ 0.85
CBX6-203ENST00000469420 ANKRD13DQ6ZTN6 518 aa20.39■□□□□ 0.85
CBX6-203ENST00000469420 TTC5Q8N0Z6 440 aa20.39■□□□□ 0.85
CBX6-203ENST00000469420 F13A1P00488 732 aa20.38■□□□□ 0.85
CBX6-203ENST00000469420 ZKSCAN1P17029 563 aaPredicted RBP20.38■□□□□ 0.85
CBX6-203ENST00000469420 GJB2P29033 226 aa20.38■□□□□ 0.85
CBX6-203ENST00000469420 MAP4K1Q92918 833 aa20.38■□□□□ 0.85
CBX6-203ENST00000469420 MED23Q9ULK4 1368 aa20.38■□□□□ 0.85
CBX6-203ENST00000469420 NUP188Q5SRE5 1749 aa20.37■□□□□ 0.85
CBX6-203ENST00000469420 CABP4P57796 275 aa20.37■□□□□ 0.85
CBX6-203ENST00000469420 TPRNQ4KMQ1 711 aa20.37■□□□□ 0.85
CBX6-203ENST00000469420 EDC3Q96F86 508 aaKnown RBP20.37■□□□□ 0.85
CBX6-203ENST00000469420 FMNL2Q96PY5 1086 aa20.37■□□□□ 0.85
CBX6-203ENST00000469420 TSPY26PQ9H489 355 aa20.37■□□□□ 0.85
CBX6-203ENST00000469420 SLC27A2O14975 620 aa20.37■□□□□ 0.85
CBX6-203ENST00000469420 ME3Q16798 604 aa20.37■□□□□ 0.85
CBX6-203ENST00000469420 SNRKQ9NRH2 765 aa20.37■□□□□ 0.85
CBX6-203ENST00000469420 NBPF26B4DH59 902 aa20.36■□□□□ 0.85
CBX6-203ENST00000469420 ATP5J2-PTCD1G3V325 749 aa20.36■□□□□ 0.85
CBX6-203ENST00000469420 PTCD1O75127 700 aaKnown RBP20.36■□□□□ 0.85
CBX6-203ENST00000469420 RFX5P48382 616 aaPredicted RBP20.36■□□□□ 0.85
CBX6-203ENST00000469420 NBPF14Q5TI25 921 aa20.36■□□□□ 0.85
CBX6-203ENST00000469420 NBPF10Q6P3W6 841 aaKnown RBP20.36■□□□□ 0.85
CBX6-203ENST00000469420 UBE3BQ7Z3V4 1068 aa20.36■□□□□ 0.85
CBX6-203ENST00000469420 NBPF15Q8N660 670 aa20.36■□□□□ 0.85
CBX6-203ENST00000469420 SH2B1Q9NRF2 756 aaPredicted RBP20.36■□□□□ 0.85
CBX6-203ENST00000469420 FIBPO43427 364 aa20.35■□□□□ 0.85
CBX6-203ENST00000469420 ZNF589Q86UQ0 364 aaPredicted RBP20.35■□□□□ 0.85
CBX6-203ENST00000469420 NECAB1Q8N987 351 aa20.35■□□□□ 0.85
CBX6-203ENST00000469420 ZSCAN31Q96LW9 406 aaPredicted RBP20.35■□□□□ 0.85
CBX6-203ENST00000469420 TAF6LQ9Y6J9 622 aa20.35■□□□□ 0.85
CBX6-203ENST00000469420 TJP1Q07157 1748 aa20.35■□□□□ 0.85
CBX6-203ENST00000469420 PLEKHG2Q9H7P9 1386 aa20.35■□□□□ 0.85
CBX6-203ENST00000469420 PAPPAQ13219 1627 aa20.35■□□□□ 0.85
CBX6-203ENST00000469420 MSNP26038 577 aaKnown RBP20.35■□□□□ 0.85
CBX6-203ENST00000469420 TPCN1Q9ULQ1 816 aa20.35■□□□□ 0.85
CBX6-203ENST00000469420 COL5A2P05997 1499 aaPredicted RBP20.34■□□□□ 0.85
CBX6-203ENST00000469420 PTPN12Q05209 780 aaKnown RBP20.34■□□□□ 0.85
CBX6-203ENST00000469420 COPRSQ9NQ92 184 aa20.34■□□□□ 0.85
CBX6-203ENST00000469420 DBNLQ9UJU6 430 aaKnown RBP20.34■□□□□ 0.85
CBX6-203ENST00000469420 MTMR6Q9Y217 621 aa20.34■□□□□ 0.85
CBX6-203ENST00000469420 WDR17Q8IZU2 1322 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms