RNA–Protein interactions for RNA: ENST00000469140.2

MTA1-209, Transcript of metastasis associated 1, humanhuman

TSL 5

Gene MTA1, Length 1,666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-209ENST00000469140 POLA2Q14181 598 aa29.37■■■□□ 2.29
MTA1-209ENST00000469140 ZBTB38Q8NAP3 1195 aaPredicted RBP29.37■■■□□ 2.29
MTA1-209ENST00000469140 BICC1Q9H694 974 aaKnown RBP29.37■■■□□ 2.29
MTA1-209ENST00000469140 SRGAP3O43295 1099 aa29.36■■■□□ 2.29
MTA1-209ENST00000469140 ARHGEF1Q92888 912 aaKnown RBP29.36■■■□□ 2.29
MTA1-209ENST00000469140 PDZRN3Q9UPQ7 1066 aa29.36■■■□□ 2.29
MTA1-209ENST00000469140 BCORQ6W2J9 1755 aa29.36■■■□□ 2.29
MTA1-209ENST00000469140 ZPR1O75312 459 aa29.35■■■□□ 2.29
MTA1-209ENST00000469140 PARP10Q53GL7 1025 aa29.35■■■□□ 2.29
MTA1-209ENST00000469140 JARID2Q92833 1246 aaPredicted RBP29.35■■■□□ 2.29
MTA1-209ENST00000469140 NUCB1Q02818 461 aa29.34■■■□□ 2.29
MTA1-209ENST00000469140 AMIGO3Q86WK7 504 aa29.34■■■□□ 2.29
MTA1-209ENST00000469140 SSFA2P28290 1259 aa29.33■■■□□ 2.29
MTA1-209ENST00000469140 RFC4P35249 363 aa29.33■■■□□ 2.29
MTA1-209ENST00000469140 RABL6Q3YEC7 729 aaPredicted RBP29.33■■■□□ 2.29
MTA1-209ENST00000469140 SMIM5Q71RC9 77 aa29.33■■■□□ 2.29
MTA1-209ENST00000469140 UBN2Q6ZU65 1347 aa29.33■■■□□ 2.29
MTA1-209ENST00000469140 USPL1Q5W0Q7 1092 aa29.32■■■□□ 2.28
MTA1-209ENST00000469140 NIP7Q9Y221 180 aaKnown RBP eCLIP29.32■■■□□ 2.28
MTA1-209ENST00000469140 EPHA10Q5JZY3 1008 aa29.31■■■□□ 2.28
MTA1-209ENST00000469140 TRMT112Q9UI30 125 aaKnown RBP29.31■■■□□ 2.28
MTA1-209ENST00000469140 CDHR2Q9BYE9 1310 aa29.31■■■□□ 2.28
MTA1-209ENST00000469140 SCN7AQ01118 1682 aa29.31■■■□□ 2.28
MTA1-209ENST00000469140 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.31■■■□□ 2.28
MTA1-209ENST00000469140 PHF14O94880 888 aa29.31■■■□□ 2.28
MTA1-209ENST00000469140 FAM89AQ96GI7 184 aa29.31■■■□□ 2.28
MTA1-209ENST00000469140 USP42Q9H9J4 1324 aaKnown RBP29.3■■■□□ 2.28
MTA1-209ENST00000469140 SF3B2Q13435 895 aaKnown RBP29.3■■■□□ 2.28
MTA1-209ENST00000469140 RTL5Q5HYW3 569 aaPredicted RBP29.3■■■□□ 2.28
MTA1-209ENST00000469140 ANKRD45Q5TZF3 282 aa29.3■■■□□ 2.28
MTA1-209ENST00000469140 PLA2G12BQ9BX93 195 aa29.3■■■□□ 2.28
MTA1-209ENST00000469140 BCL2L12Q9HB09 334 aa29.3■■■□□ 2.28
MTA1-209ENST00000469140 UBR3Q6ZT12 1888 aa29.29■■■□□ 2.28
MTA1-209ENST00000469140 FOXO4P98177 505 aa29.29■■■□□ 2.28
MTA1-209ENST00000469140 CHD1LQ86WJ1 897 aa29.29■■■□□ 2.28
MTA1-209ENST00000469140 SRP68Q9UHB9 627 aaKnown RBP29.29■■■□□ 2.28
MTA1-209ENST00000469140 SUSD4Q5VX71 490 aa29.28■■■□□ 2.28
MTA1-209ENST00000469140 CAMKK2Q96RR4 588 aa29.28■■■□□ 2.28
MTA1-209ENST00000469140 UTP14AQ9BVJ6 771 aaKnown RBP29.28■■■□□ 2.28
MTA1-209ENST00000469140 AKT1S1Q96B36 256 aa29.28■■■□□ 2.28
MTA1-209ENST00000469140 SKAP1Q86WV1 359 aa29.27■■■□□ 2.28
MTA1-209ENST00000469140 ZBTB47Q9UFB7 747 aaPredicted RBP29.27■■■□□ 2.28
MTA1-209ENST00000469140 HSP90AB4PQ58FF6 505 aa29.26■■■□□ 2.27
MTA1-209ENST00000469140 NOP58Q9Y2X3 529 aaKnown RBP29.26■■■□□ 2.27
MTA1-209ENST00000469140 SURF6O75683 361 aaKnown RBP29.25■■■□□ 2.27
MTA1-209ENST00000469140 LMBR1LQ6UX01 489 aa29.25■■■□□ 2.27
MTA1-209ENST00000469140 EXOC6BQ9Y2D4 811 aa29.25■■■□□ 2.27
MTA1-209ENST00000469140 C4AP0C0L4 1744 aa29.25■■■□□ 2.27
MTA1-209ENST00000469140 SH3TC1Q8TE82 1336 aa29.25■■■□□ 2.27
MTA1-209ENST00000469140 RAB11FIP3O75154 756 aa29.25■■■□□ 2.27
MTA1-209ENST00000469140 BAG6P46379 1132 aa29.25■■■□□ 2.27
MTA1-209ENST00000469140 EN1Q05925 392 aaPredicted RBP29.25■■■□□ 2.27
MTA1-209ENST00000469140 TFCP2L1Q9NZI6 479 aa29.25■■■□□ 2.27
MTA1-209ENST00000469140 IRS4O14654 1257 aaPredicted RBP29.24■■■□□ 2.27
MTA1-209ENST00000469140 HSP90B1P14625 803 aaKnown RBP29.24■■■□□ 2.27
MTA1-209ENST00000469140 RGS3P49796 1198 aa29.24■■■□□ 2.27
MTA1-209ENST00000469140 TBC1D9BQ66K14 1250 aa29.24■■■□□ 2.27
MTA1-209ENST00000469140 LNPKQ9C0E8 428 aa29.24■■■□□ 2.27
MTA1-209ENST00000469140 NTSR2O95665 410 aa29.23■■■□□ 2.27
MTA1-209ENST00000469140 EZH2Q15910 746 aaKnown RBP29.23■■■□□ 2.27
MTA1-209ENST00000469140 ZNF827Q17R98 1081 aa29.23■■■□□ 2.27
MTA1-209ENST00000469140 FLAD1Q8NFF5 587 aa29.23■■■□□ 2.27
MTA1-209ENST00000469140 SETDB2Q96T68 719 aa29.23■■■□□ 2.27
MTA1-209ENST00000469140 CCDC125Q86Z20 511 aa29.22■■■□□ 2.27
MTA1-209ENST00000469140 SYNE4Q8N205 404 aa29.21■■■□□ 2.27
MTA1-209ENST00000469140 PDE8AO60658 829 aa29.21■■■□□ 2.27
MTA1-209ENST00000469140 CSF1RP07333 972 aa29.21■■■□□ 2.27
MTA1-209ENST00000469140 LRRCC1Q9C099 1032 aa29.21■■■□□ 2.27
MTA1-209ENST00000469140 RFX5P48382 616 aaPredicted RBP29.2■■■□□ 2.26
MTA1-209ENST00000469140 BICDL1Q6ZP65 573 aa29.2■■■□□ 2.26
MTA1-209ENST00000469140 COPRSQ9NQ92 184 aa29.2■■■□□ 2.26
MTA1-209ENST00000469140 FAM177BA6PVY3 158 aa29.19■■■□□ 2.26
MTA1-209ENST00000469140 APBB1O00213 710 aa29.19■■■□□ 2.26
MTA1-209ENST00000469140 PDE4AP27815 886 aa29.19■■■□□ 2.26
MTA1-209ENST00000469140 NYXQ9GZU5 481 aa29.19■■■□□ 2.26
MTA1-209ENST00000469140 CHMP3Q9Y3E7 222 aa29.18■■■□□ 2.26
MTA1-209ENST00000469140 GYS1P13807 737 aa29.18■■■□□ 2.26
MTA1-209ENST00000469140 ERC1Q8IUD2 1116 aa29.18■■■□□ 2.26
MTA1-209ENST00000469140 PA2G4Q9UQ80 394 aaKnown RBP29.18■■■□□ 2.26
MTA1-209ENST00000469140 CTSWP56202 376 aa29.17■■■□□ 2.26
MTA1-209ENST00000469140 KIF1BPQ96EK5 621 aa29.17■■■□□ 2.26
MTA1-209ENST00000469140 PTPN12Q05209 780 aaKnown RBP29.16■■■□□ 2.26
MTA1-209ENST00000469140 G3BP1Q13283 466 aaKnown RBP eCLIP29.16■■■□□ 2.26
MTA1-209ENST00000469140 OS9Q13438 667 aaPredicted RBP29.16■■■□□ 2.26
MTA1-209ENST00000469140 TTLL11Q8NHH1 800 aa29.15■■■□□ 2.26
MTA1-209ENST00000469140 RHPN1Q8TCX5 695 aa29.15■■■□□ 2.26
MTA1-209ENST00000469140 SMARCA5O60264 1052 aaPredicted RBP29.15■■■□□ 2.26
MTA1-209ENST00000469140 CCDC57Q2TAC2 916 aa29.15■■■□□ 2.26
MTA1-209ENST00000469140 NFIXQ14938 502 aa29.14■■■□□ 2.26
MTA1-209ENST00000469140 TPTE2Q6XPS3 522 aa29.14■■■□□ 2.26
MTA1-209ENST00000469140 NBPF5PQ86XG9 351 aaPredicted RBP29.14■■■□□ 2.26
MTA1-209ENST00000469140 NUTM1Q86Y26 1132 aa29.14■■■□□ 2.26
MTA1-209ENST00000469140 COL24A1Q17RW2 1714 aa29.14■■■□□ 2.26
MTA1-209ENST00000469140 CARMIL3Q8ND23 1372 aa29.14■■■□□ 2.25
MTA1-209ENST00000469140 HCLS1P14317 486 aaPredicted RBP29.13■■■□□ 2.25
MTA1-209ENST00000469140 COL23A1Q86Y22 540 aaPredicted RBP29.13■■■□□ 2.25
MTA1-209ENST00000469140 GTF2E1P29083 439 aaPredicted RBP29.12■■■□□ 2.25
MTA1-209ENST00000469140 SLC10A5Q5PT55 438 aa29.12■■■□□ 2.25
MTA1-209ENST00000469140 DEFB132Q7Z7B7 95 aa29.12■■■□□ 2.25
MTA1-209ENST00000469140 KLHDC4Q8TBB5 520 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms