RNA–Protein interactions for RNA: ENST00000468965.2

SCAP-210, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-210ENST00000468965 SERPINB2P05120 415 aa16.61■□□□□ 0.25
SCAP-210ENST00000468965 RRP1P56182 461 aaKnown RBP16.61■□□□□ 0.25
SCAP-210ENST00000468965 CCDC191Q8NCU4 936 aa16.61■□□□□ 0.25
SCAP-210ENST00000468965 SPON1Q9HCB6 807 aa16.61■□□□□ 0.25
SCAP-210ENST00000468965 RNF123Q5XPI4 1314 aa16.61■□□□□ 0.25
SCAP-210ENST00000468965 TNRC6CQ9HCJ0 1690 aaKnown RBP16.6■□□□□ 0.25
SCAP-210ENST00000468965 DZIP1LQ8IYY4 767 aaKnown RBP16.6■□□□□ 0.25
SCAP-210ENST00000468965 SRCIN1Q9C0H9 1055 aa16.6■□□□□ 0.25
SCAP-210ENST00000468965 CWC25Q9NXE8 425 aaPredicted RBP16.6■□□□□ 0.25
SCAP-210ENST00000468965 PARP3Q9Y6F1 533 aa16.6■□□□□ 0.25
SCAP-210ENST00000468965 LRP5O75197 1615 aa16.59■□□□□ 0.25
SCAP-210ENST00000468965 ALDH1L1O75891 902 aa16.59■□□□□ 0.25
SCAP-210ENST00000468965 GCKRQ14397 625 aa16.59■□□□□ 0.25
SCAP-210ENST00000468965 C20orf194Q5TEA3 1177 aa16.59■□□□□ 0.25
SCAP-210ENST00000468965 INTS3Q68E01 1043 aaKnown RBP16.59■□□□□ 0.25
SCAP-210ENST00000468965 NBPF5PQ86XG9 351 aaPredicted RBP16.59■□□□□ 0.25
SCAP-210ENST00000468965 TMEM57Q8N5G2 664 aa16.59■□□□□ 0.25
SCAP-210ENST00000468965 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.59■□□□□ 0.25
SCAP-210ENST00000468965 PANK1Q8TE04 598 aa16.59■□□□□ 0.25
SCAP-210ENST00000468965 SUPT16HQ9Y5B9 1047 aaKnown RBP16.59■□□□□ 0.25
SCAP-210ENST00000468965 ABCC12Q96J65 1359 aa16.59■□□□□ 0.25
SCAP-210ENST00000468965 POLD1P28340 1107 aa16.58■□□□□ 0.24
SCAP-210ENST00000468965 CCT4P50991 539 aaKnown RBP16.58■□□□□ 0.24
SCAP-210ENST00000468965 PRR5LQ6MZQ0 368 aa16.58■□□□□ 0.24
SCAP-210ENST00000468965 PPP1R42Q7Z4L9 355 aa16.58■□□□□ 0.24
SCAP-210ENST00000468965 NUTM1Q86Y26 1132 aa16.58■□□□□ 0.24
SCAP-210ENST00000468965 FTSJ3Q8IY81 847 aaKnown RBP16.58■□□□□ 0.24
SCAP-210ENST00000468965 SYNE4Q8N205 404 aa16.58■□□□□ 0.24
SCAP-210ENST00000468965 CCDC24Q8N4L8 307 aa16.58■□□□□ 0.24
SCAP-210ENST00000468965 UTP14AQ9BVJ6 771 aaKnown RBP16.58■□□□□ 0.24
SCAP-210ENST00000468965 KIAA1551Q9HCM1 1747 aa16.58■□□□□ 0.24
SCAP-210ENST00000468965 C10orf71Q711Q0 1435 aa16.57■□□□□ 0.24
SCAP-210ENST00000468965 CNBD1Q8NA66 436 aa16.57■□□□□ 0.24
SCAP-210ENST00000468965 JARID2Q92833 1246 aaPredicted RBP16.57■□□□□ 0.24
SCAP-210ENST00000468965 NYXQ9GZU5 481 aa16.57■□□□□ 0.24
SCAP-210ENST00000468965 TRMT112Q9UI30 125 aaKnown RBP16.57■□□□□ 0.24
SCAP-210ENST00000468965 COL11A2P13942 1736 aaPredicted RBP16.56■□□□□ 0.24
SCAP-210ENST00000468965 PCCAP05165 728 aaPredicted RBP16.56■□□□□ 0.24
SCAP-210ENST00000468965 CASP7P55210 303 aa16.56■□□□□ 0.24
SCAP-210ENST00000468965 PDE3AQ14432 1141 aa16.56■□□□□ 0.24
SCAP-210ENST00000468965 ERFEQ4G0M1 354 aa16.56■□□□□ 0.24
SCAP-210ENST00000468965 RTL5Q5HYW3 569 aaPredicted RBP16.56■□□□□ 0.24
SCAP-210ENST00000468965 TPTE2Q6XPS3 522 aa16.56■□□□□ 0.24
SCAP-210ENST00000468965 ZBTB38Q8NAP3 1195 aaPredicted RBP16.56■□□□□ 0.24
SCAP-210ENST00000468965 FAM89AQ96GI7 184 aa16.56■□□□□ 0.24
SCAP-210ENST00000468965 SH3TC1Q8TE82 1336 aa16.55■□□□□ 0.24
SCAP-210ENST00000468965 H7C1W4 665 aa16.55■□□□□ 0.24
SCAP-210ENST00000468965 GRM8O00222 908 aa16.55■□□□□ 0.24
SCAP-210ENST00000468965 USP44Q9H0E7 712 aa16.55■□□□□ 0.24
SCAP-210ENST00000468965 TAF1P21675 1872 aa16.54■□□□□ 0.24
SCAP-210ENST00000468965 RIC1Q4ADV7 1423 aa16.54■□□□□ 0.24
SCAP-210ENST00000468965 DLEC1Q9Y238 1755 aa16.54■□□□□ 0.24
SCAP-210ENST00000468965 UTYO14607 1347 aa16.54■□□□□ 0.24
SCAP-210ENST00000468965 MS4A1P11836 297 aa16.54■□□□□ 0.24
SCAP-210ENST00000468965 UBE3BQ7Z3V4 1068 aa16.54■□□□□ 0.24
SCAP-210ENST00000468965 CDHR2Q9BYE9 1310 aa16.53■□□□□ 0.24
SCAP-210ENST00000468965 BRCA1P38398 1863 aaKnown RBP16.53■□□□□ 0.24
SCAP-210ENST00000468965 CACNA1SQ13698 1873 aa16.53■□□□□ 0.24
SCAP-210ENST00000468965 NBPF7P0C2Y1 421 aaPredicted RBP16.53■□□□□ 0.24
SCAP-210ENST00000468965 ITPRIPQ8IWB1 547 aa16.53■□□□□ 0.24
SCAP-210ENST00000468965 MEIS3Q99687 375 aa16.53■□□□□ 0.24
SCAP-210ENST00000468965 COG6Q9Y2V7 657 aa16.53■□□□□ 0.24
SCAP-210ENST00000468965 IRS4O14654 1257 aaPredicted RBP16.52■□□□□ 0.24
SCAP-210ENST00000468965 NPHP1O15259 732 aa16.52■□□□□ 0.24
SCAP-210ENST00000468965 HCLS1P14317 486 aaPredicted RBP16.52■□□□□ 0.24
SCAP-210ENST00000468965 GTF2E1P29083 439 aaPredicted RBP16.52■□□□□ 0.24
SCAP-210ENST00000468965 ST5P78524 1137 aa16.52■□□□□ 0.24
SCAP-210ENST00000468965 MVPQ14764 893 aaKnown RBP16.52■□□□□ 0.24
SCAP-210ENST00000468965 SLC10A5Q5PT55 438 aa16.52■□□□□ 0.24
SCAP-210ENST00000468965 C3orf67Q6ZVT6 689 aa16.52■□□□□ 0.24
SCAP-210ENST00000468965 C9orf78Q9NZ63 289 aaPredicted RBP16.52■□□□□ 0.24
SCAP-210ENST00000468965 ZBTB7BO15156 539 aaPredicted RBP16.5■□□□□ 0.23
SCAP-210ENST00000468965 KAZALD1Q96I82 304 aa16.5■□□□□ 0.23
SCAP-210ENST00000468965 SUCLG2Q96I99 432 aa16.5■□□□□ 0.23
SCAP-210ENST00000468965 BRIP1Q9BX63 1249 aa16.5■□□□□ 0.23
SCAP-210ENST00000468965 PDE8AO60658 829 aa16.49■□□□□ 0.23
SCAP-210ENST00000468965 EPHA10Q5JZY3 1008 aa16.49■□□□□ 0.23
SCAP-210ENST00000468965 PLA2G12BQ9BX93 195 aa16.49■□□□□ 0.23
SCAP-210ENST00000468965 SPEF2Q9C093 1822 aa16.49■□□□□ 0.23
SCAP-210ENST00000468965 KLRG2A4D1S0 409 aaPredicted RBP16.48■□□□□ 0.23
SCAP-210ENST00000468965 UBTFL1P0CB47 393 aaPredicted RBP16.48■□□□□ 0.23
SCAP-210ENST00000468965 FOXO4P98177 505 aa16.48■□□□□ 0.23
SCAP-210ENST00000468965 CRBNQ96SW2 442 aa16.48■□□□□ 0.23
SCAP-210ENST00000468965 DDX19BQ9UMR2 479 aa16.48■□□□□ 0.23
SCAP-210ENST00000468965 COL4A1P02462 1669 aa16.48■□□□□ 0.23
SCAP-210ENST00000468965 GNAI3P08754 354 aa16.47■□□□□ 0.23
SCAP-210ENST00000468965 CRY2Q49AN0 593 aa16.47■□□□□ 0.23
SCAP-210ENST00000468965 KLHL34Q8N239 644 aa16.47■□□□□ 0.23
SCAP-210ENST00000468965 FHDC1Q9C0D6 1143 aaPredicted RBP16.47■□□□□ 0.23
SCAP-210ENST00000468965 PPP1R1BQ9UD71 204 aaPredicted RBP16.47■□□□□ 0.23
SCAP-210ENST00000468965 CD2APQ9Y5K6 639 aa16.47■□□□□ 0.23
SCAP-210ENST00000468965 SLX4Q8IY92 1834 aa16.47■□□□□ 0.23
SCAP-210ENST00000468965 CHRNA5P30532 468 aa16.46■□□□□ 0.23
SCAP-210ENST00000468965 PDE6BP35913 854 aa16.46■□□□□ 0.23
SCAP-210ENST00000468965 CTSWP56202 376 aa16.46■□□□□ 0.23
SCAP-210ENST00000468965 IRX6P78412 446 aaPredicted RBP16.46■□□□□ 0.23
SCAP-210ENST00000468965 SF3B3Q15393 1217 aaKnown RBP16.46■□□□□ 0.23
SCAP-210ENST00000468965 ANKRD44Q8N8A2 993 aa16.46■□□□□ 0.23
SCAP-210ENST00000468965 NLRP3Q96P20 1036 aa16.46■□□□□ 0.23
SCAP-210ENST00000468965 BICC1Q9H694 974 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms