RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 ADCY9O60503 1353 aa10.25□□□□□ -0.77
HDAC6-216ENST00000468949 C10orf71Q711Q0 1435 aa10.24□□□□□ -0.77
HDAC6-216ENST00000468949 CAMTA2O94983 1202 aa10.24□□□□□ -0.77
HDAC6-216ENST00000468949 USPL1Q5W0Q7 1092 aa10.24□□□□□ -0.77
HDAC6-216ENST00000468949 GIGYF2Q6Y7W6 1299 aaKnown RBP10.24□□□□□ -0.77
HDAC6-216ENST00000468949 SMIM5Q71RC9 77 aa10.24□□□□□ -0.77
HDAC6-216ENST00000468949 PANK1Q8TE04 598 aa10.24□□□□□ -0.77
HDAC6-216ENST00000468949 METTL22Q9BUU2 404 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-216ENST00000468949 NARFQ9UHQ1 456 aa10.24□□□□□ -0.77
HDAC6-216ENST00000468949 KIAA1551Q9HCM1 1747 aa10.24□□□□□ -0.77
HDAC6-216ENST00000468949 IRX6P78412 446 aaPredicted RBP10.23□□□□□ -0.77
HDAC6-216ENST00000468949 MVPQ14764 893 aaKnown RBP10.23□□□□□ -0.77
HDAC6-216ENST00000468949 CLEC4GQ6UXB4 293 aa10.23□□□□□ -0.77
HDAC6-216ENST00000468949 TMEM57Q8N5G2 664 aa10.23□□□□□ -0.77
HDAC6-216ENST00000468949 LINS1Q8NG48 757 aa10.23□□□□□ -0.77
HDAC6-216ENST00000468949 C9orf78Q9NZ63 289 aaPredicted RBP10.23□□□□□ -0.77
HDAC6-216ENST00000468949 SRP68Q9UHB9 627 aaKnown RBP10.23□□□□□ -0.77
HDAC6-216ENST00000468949 DDX19BQ9UMR2 479 aa10.23□□□□□ -0.77
HDAC6-216ENST00000468949 HDAC5Q9UQL6 1122 aa10.23□□□□□ -0.77
HDAC6-216ENST00000468949 ARFGEF2Q9Y6D5 1785 aa10.23□□□□□ -0.77
HDAC6-216ENST00000468949 ATP10DQ9P241 1426 aa10.23□□□□□ -0.77
HDAC6-216ENST00000468949 ATP5J2-PTCD1G3V325 749 aa10.22□□□□□ -0.77
HDAC6-216ENST00000468949 RGL2O15211 777 aa10.22□□□□□ -0.77
HDAC6-216ENST00000468949 ALDH1L1O75891 902 aa10.22□□□□□ -0.77
HDAC6-216ENST00000468949 MMP10P09238 476 aa10.22□□□□□ -0.77
HDAC6-216ENST00000468949 GYS1P13807 737 aa10.22□□□□□ -0.77
HDAC6-216ENST00000468949 GPTP24298 496 aa10.22□□□□□ -0.77
HDAC6-216ENST00000468949 GTF2E1P29083 439 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-216ENST00000468949 TCIRG1Q13488 830 aa10.22□□□□□ -0.77
HDAC6-216ENST00000468949 PARP10Q53GL7 1025 aa10.22□□□□□ -0.77
HDAC6-216ENST00000468949 BICDL1Q6ZP65 573 aa10.22□□□□□ -0.77
HDAC6-216ENST00000468949 NLGN1Q8N2Q7 840 aa10.22□□□□□ -0.77
HDAC6-216ENST00000468949 NLGN2Q8NFZ4 835 aa10.22□□□□□ -0.77
HDAC6-216ENST00000468949 CWC25Q9NXE8 425 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-216ENST00000468949 NIP7Q9Y221 180 aaKnown RBP eCLIP10.22□□□□□ -0.77
HDAC6-216ENST00000468949 COG6Q9Y2V7 657 aa10.22□□□□□ -0.77
HDAC6-216ENST00000468949 CD2APQ9Y5K6 639 aa10.22□□□□□ -0.77
HDAC6-216ENST00000468949 RNF123Q5XPI4 1314 aa10.22□□□□□ -0.77
HDAC6-216ENST00000468949 HLFQ16534 295 aa10.21□□□□□ -0.77
HDAC6-216ENST00000468949 CWF19L2Q2TBE0 894 aaKnown RBP10.21□□□□□ -0.77
HDAC6-216ENST00000468949 BEND3Q5T5X7 828 aa10.21□□□□□ -0.77
HDAC6-216ENST00000468949 C20orf194Q5TEA3 1177 aa10.21□□□□□ -0.77
HDAC6-216ENST00000468949 INTS3Q68E01 1043 aaKnown RBP10.21□□□□□ -0.77
HDAC6-216ENST00000468949 PPP1R42Q7Z4L9 355 aa10.21□□□□□ -0.77
HDAC6-216ENST00000468949 CCDC191Q8NCU4 936 aa10.21□□□□□ -0.77
HDAC6-216ENST00000468949 SETDB2Q96T68 719 aa10.21□□□□□ -0.77
HDAC6-216ENST00000468949 TNNQ9UQP3 1299 aa10.21□□□□□ -0.77
HDAC6-216ENST00000468949 CARMIL3Q8ND23 1372 aa10.21□□□□□ -0.78
HDAC6-216ENST00000468949 NRXN2Q9P2S2 1712 aa10.21□□□□□ -0.78
HDAC6-216ENST00000468949 FAM177BA6PVY3 158 aa10.2□□□□□ -0.78
HDAC6-216ENST00000468949 NEURL1BA8MQ27 555 aa10.2□□□□□ -0.78
HDAC6-216ENST00000468949 GNAI3P08754 354 aa10.2□□□□□ -0.78
HDAC6-216ENST00000468949 UBTFL1P0CB47 393 aaPredicted RBP10.2□□□□□ -0.78
HDAC6-216ENST00000468949 RLBP1P12271 317 aa10.2□□□□□ -0.78
HDAC6-216ENST00000468949 HSP90B1P14625 803 aaKnown RBP10.2□□□□□ -0.78
HDAC6-216ENST00000468949 CHD4Q14839 1912 aa10.2□□□□□ -0.78
HDAC6-216ENST00000468949 NBPF5PQ86XG9 351 aaPredicted RBP10.2□□□□□ -0.78
HDAC6-216ENST00000468949 CRBNQ96SW2 442 aa10.2□□□□□ -0.78
HDAC6-216ENST00000468949 NYXQ9GZU5 481 aa10.2□□□□□ -0.78
HDAC6-216ENST00000468949 BRCA1P38398 1863 aaKnown RBP10.19□□□□□ -0.78
HDAC6-216ENST00000468949 DLEC1Q9Y238 1755 aa10.19□□□□□ -0.78
HDAC6-216ENST00000468949 GRM8O00222 908 aa10.19□□□□□ -0.78
HDAC6-216ENST00000468949 ST5P78524 1137 aa10.19□□□□□ -0.78
HDAC6-216ENST00000468949 TBC1D9BQ66K14 1250 aa10.19□□□□□ -0.78
HDAC6-216ENST00000468949 UTP14AQ9BVJ6 771 aaKnown RBP10.19□□□□□ -0.78
HDAC6-216ENST00000468949 TRMT112Q9UI30 125 aaKnown RBP10.19□□□□□ -0.78
HDAC6-216ENST00000468949 PARP3Q9Y6F1 533 aa10.19□□□□□ -0.78
HDAC6-216ENST00000468949 ANKRD36CQ5JPF3 1778 aa10.19□□□□□ -0.78
HDAC6-216ENST00000468949 N4BP2Q86UW6 1770 aaPredicted RBP10.19□□□□□ -0.78
HDAC6-216ENST00000468949 IGKV5-2P06315 115 aa10.18□□□□□ -0.78
HDAC6-216ENST00000468949 GCKRQ14397 625 aa10.18□□□□□ -0.78
HDAC6-216ENST00000468949 GPR162Q16538 588 aa10.18□□□□□ -0.78
HDAC6-216ENST00000468949 UBE3BQ7Z3V4 1068 aa10.18□□□□□ -0.78
HDAC6-216ENST00000468949 NLRP10Q86W26 655 aa10.18□□□□□ -0.78
HDAC6-216ENST00000468949 PELP1Q8IZL8 1130 aaKnown RBP10.18□□□□□ -0.78
HDAC6-216ENST00000468949 CNBD1Q8NA66 436 aa10.18□□□□□ -0.78
HDAC6-216ENST00000468949 ISCA1Q9BUE6 129 aa10.18□□□□□ -0.78
HDAC6-216ENST00000468949 AFDNP55196 1824 aaKnown RBP10.18□□□□□ -0.78
HDAC6-216ENST00000468949 IBTKQ9P2D0 1353 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-216ENST00000468949 UBN2Q6ZU65 1347 aa10.17□□□□□ -0.78
HDAC6-216ENST00000468949 SH3TC1Q8TE82 1336 aa10.17□□□□□ -0.78
HDAC6-216ENST00000468949 GNAI2P04899 355 aa10.17□□□□□ -0.78
HDAC6-216ENST00000468949 YY1P25490 414 aa10.17□□□□□ -0.78
HDAC6-216ENST00000468949 TRIM28Q13263 835 aaKnown RBP10.17□□□□□ -0.78
HDAC6-216ENST00000468949 AAMPQ13685 434 aa10.17□□□□□ -0.78
HDAC6-216ENST00000468949 NFIXQ14938 502 aa10.17□□□□□ -0.78
HDAC6-216ENST00000468949 RTL5Q5HYW3 569 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-216ENST00000468949 TPTE2Q6XPS3 522 aa10.17□□□□□ -0.78
HDAC6-216ENST00000468949 ZNF34Q8IZ26 560 aa10.17□□□□□ -0.78
HDAC6-216ENST00000468949 ZBTB38Q8NAP3 1195 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-216ENST00000468949 MEIS3Q99687 375 aa10.17□□□□□ -0.78
HDAC6-216ENST00000468949 BCL2L12Q9HB09 334 aa10.17□□□□□ -0.78
HDAC6-216ENST00000468949 PCCAP05165 728 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-216ENST00000468949 DDR1Q08345 913 aa10.16□□□□□ -0.78
HDAC6-216ENST00000468949 SUSD4Q5VX71 490 aa10.16□□□□□ -0.78
HDAC6-216ENST00000468949 EXOC6Q8TAG9 804 aa10.16□□□□□ -0.78
HDAC6-216ENST00000468949 CHMP3Q9Y3E7 222 aa10.16□□□□□ -0.78
HDAC6-216ENST00000468949 NUP98P52948 1817 aa10.16□□□□□ -0.78
HDAC6-216ENST00000468949 ARFGEF1Q9Y6D6 1849 aa10.15□□□□□ -0.78
HDAC6-216ENST00000468949 POLRMTO00411 1230 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms