RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 DMGDHQ9UI17 866 aaKnown RBP7.64□□□□□ -1.19
GPNMB-207ENST00000468723 GDF2Q9UK05 429 aaPredicted RBP7.64□□□□□ -1.19
GPNMB-207ENST00000468723 IDH3AP50213 366 aa7.63□□□□□ -1.19
GPNMB-207ENST00000468723 SPEM2Q0P670 501 aa7.63□□□□□ -1.19
GPNMB-207ENST00000468723 SYT9Q86SS6 491 aa7.63□□□□□ -1.19
GPNMB-207ENST00000468723 MICAL2O94851 1124 aa7.62□□□□□ -1.19
GPNMB-207ENST00000468723 ADH6P28332 368 aa7.62□□□□□ -1.19
GPNMB-207ENST00000468723 ZNF468Q5VIY5 522 aaPredicted RBP7.62□□□□□ -1.19
GPNMB-207ENST00000468723 C16orf46Q6P387 395 aa7.62□□□□□ -1.19
GPNMB-207ENST00000468723 SEPT3Q9UH03 358 aa7.62□□□□□ -1.19
GPNMB-207ENST00000468723 USP20Q9Y2K6 914 aa7.62□□□□□ -1.19
GPNMB-207ENST00000468723 KCNQ4P56696 695 aa7.61□□□□□ -1.19
GPNMB-207ENST00000468723 IER5Q5VY09 327 aa7.61□□□□□ -1.19
GPNMB-207ENST00000468723 SLCO4C1Q6ZQN7 724 aa7.61□□□□□ -1.19
GPNMB-207ENST00000468723 FCHSD1Q86WN1 690 aa7.61□□□□□ -1.19
GPNMB-207ENST00000468723 BHMTQ93088 406 aa7.61□□□□□ -1.19
GPNMB-207ENST00000468723 PTCD1O75127 700 aaKnown RBP7.6□□□□□ -1.19
GPNMB-207ENST00000468723 EPXP11678 715 aa7.6□□□□□ -1.19
GPNMB-207ENST00000468723 AMPD1P23109 780 aa7.6□□□□□ -1.19
GPNMB-207ENST00000468723 TREML1Q86YW5 311 aa7.6□□□□□ -1.19
GPNMB-207ENST00000468723 RRAGCQ9HB90 399 aa7.6□□□□□ -1.19
GPNMB-207ENST00000468723 CNTNAP5Q8WYK1 1306 aa7.59□□□□□ -1.19
GPNMB-207ENST00000468723 GRNP28799 593 aaKnown RBP7.59□□□□□ -1.19
GPNMB-207ENST00000468723 INPP5BP32019 993 aa7.59□□□□□ -1.19
GPNMB-207ENST00000468723 FAM26DQ5JW98 314 aa7.59□□□□□ -1.19
GPNMB-207ENST00000468723 COL26A1Q96A83 441 aa7.59□□□□□ -1.19
GPNMB-207ENST00000468723 BTBD6Q96KE9 485 aa7.59□□□□□ -1.19
GPNMB-207ENST00000468723 IGFLR1Q9H665 355 aa7.59□□□□□ -1.19
GPNMB-207ENST00000468723 AVENQ9NQS1 362 aaPredicted RBP7.59□□□□□ -1.19
GPNMB-207ENST00000468723 LRRC4BQ9NT99 713 aa7.59□□□□□ -1.19
GPNMB-207ENST00000468723 TNFRSF10BO14763 440 aa7.58□□□□□ -1.2
GPNMB-207ENST00000468723 OPLAHO14841 1288 aa7.58□□□□□ -1.2
GPNMB-207ENST00000468723 BRD2P25440 801 aaKnown RBP7.58□□□□□ -1.2
GPNMB-207ENST00000468723 ARSDP51689 593 aa7.58□□□□□ -1.2
GPNMB-207ENST00000468723 SNRPNP63162 240 aaKnown RBP7.58□□□□□ -1.2
GPNMB-207ENST00000468723 TBC1D8BQ0IIM8 1120 aa7.58□□□□□ -1.2
GPNMB-207ENST00000468723 KRT25Q7Z3Z0 450 aa7.58□□□□□ -1.2
GPNMB-207ENST00000468723 ETFBKMTQ8IXQ9 262 aa7.58□□□□□ -1.2
GPNMB-207ENST00000468723 RGL4Q8IZJ4 473 aa7.58□□□□□ -1.2
GPNMB-207ENST00000468723 CMTR1Q8N1G2 835 aaKnown RBP7.58□□□□□ -1.2
GPNMB-207ENST00000468723 LOC100996750A0A140TA64 210 aa7.57□□□□□ -1.2
GPNMB-207ENST00000468723 EPB42P16452 691 aa7.57□□□□□ -1.2
GPNMB-207ENST00000468723 SSFA2P28290 1259 aa7.57□□□□□ -1.2
GPNMB-207ENST00000468723 IRS1P35568 1242 aa7.57□□□□□ -1.2
GPNMB-207ENST00000468723 NEUROD1Q13562 356 aa7.57□□□□□ -1.2
GPNMB-207ENST00000468723 CCINQ13939 588 aa7.57□□□□□ -1.2
GPNMB-207ENST00000468723 PNMA5Q96PV4 448 aa7.57□□□□□ -1.2
GPNMB-207ENST00000468723 KRTAP4-6Q9BYQ5 205 aa7.57□□□□□ -1.2
GPNMB-207ENST00000468723 GSX2Q9BZM3 304 aa7.57□□□□□ -1.2
GPNMB-207ENST00000468723 RTCBQ9Y3I0 505 aaKnown RBP7.57□□□□□ -1.2
GPNMB-207ENST00000468723 SIN3BO75182 1162 aa7.56□□□□□ -1.2
GPNMB-207ENST00000468723 CHSY3Q70JA7 882 aa7.56□□□□□ -1.2
GPNMB-207ENST00000468723 SCARF2Q96GP6 870 aaPredicted RBP7.56□□□□□ -1.2
GPNMB-207ENST00000468723 ELOA3CA0A087WX78 387 aaPredicted RBP7.55□□□□□ -1.2
GPNMB-207ENST00000468723 ELOA3DA6NLF2 546 aaPredicted RBP7.55□□□□□ -1.2
GPNMB-207ENST00000468723 ZBTB39O15060 712 aa7.55□□□□□ -1.2
GPNMB-207ENST00000468723 SASH3O75995 380 aa7.55□□□□□ -1.2
GPNMB-207ENST00000468723 NFKB1P19838 968 aa7.55□□□□□ -1.2
GPNMB-207ENST00000468723 ELOA3BQ3SY89 546 aa7.55□□□□□ -1.2
GPNMB-207ENST00000468723 PHLDB3Q6NSJ2 640 aa7.55□□□□□ -1.2
GPNMB-207ENST00000468723 PODNQ7Z5L7 613 aa7.55□□□□□ -1.2
GPNMB-207ENST00000468723 RETREG2Q8NC44 543 aa7.55□□□□□ -1.2
GPNMB-207ENST00000468723 ELOA3Q8NG57 546 aa7.55□□□□□ -1.2
GPNMB-207ENST00000468723 STIM2Q9P246 746 aa7.55□□□□□ -1.2
GPNMB-207ENST00000468723 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.55□□□□□ -1.2
GPNMB-207ENST00000468723 ALAS2P22557 587 aa7.54□□□□□ -1.2
GPNMB-207ENST00000468723 TARSP26639 723 aaKnown RBP7.54□□□□□ -1.2
GPNMB-207ENST00000468723 MTMR3Q13615 1198 aa7.54□□□□□ -1.2
GPNMB-207ENST00000468723 BEND7Q8N7W2 519 aaPredicted RBP7.54□□□□□ -1.2
GPNMB-207ENST00000468723 GTF3C2Q8WUA4 911 aaPredicted RBP7.54□□□□□ -1.2
GPNMB-207ENST00000468723 UBE2OQ9C0C9 1292 aaKnown RBP7.54□□□□□ -1.2
GPNMB-207ENST00000468723 HOXB4P17483 251 aaPredicted RBP7.53□□□□□ -1.2
GPNMB-207ENST00000468723 ADH7P40394 386 aa7.53□□□□□ -1.2
GPNMB-207ENST00000468723 ZAP70P43403 619 aa7.53□□□□□ -1.2
GPNMB-207ENST00000468723 KCNMA1Q12791 1236 aa7.53□□□□□ -1.2
GPNMB-207ENST00000468723 USTQ9Y2C2 406 aa7.53□□□□□ -1.2
GPNMB-207ENST00000468723 ADARB2-AS1A8MUL3 147 aa7.52□□□□□ -1.21
GPNMB-207ENST00000468723 RNF225M0QZC1 329 aaPredicted RBP7.52□□□□□ -1.21
GPNMB-207ENST00000468723 XYLBO75191 536 aa7.52□□□□□ -1.21
GPNMB-207ENST00000468723 GSK3AP49840 483 aa7.52□□□□□ -1.21
GPNMB-207ENST00000468723 RASSF7Q02833 373 aa7.52□□□□□ -1.21
GPNMB-207ENST00000468723 ATCAYQ86WG3 371 aa7.52□□□□□ -1.21
GPNMB-207ENST00000468723 GPR152Q8TDT2 470 aa7.52□□□□□ -1.21
GPNMB-207ENST00000468723 TNFRSF25Q93038 417 aa7.52□□□□□ -1.21
GPNMB-207ENST00000468723 MDFIQ99750 246 aa7.52□□□□□ -1.21
GPNMB-207ENST00000468723 ZFATQ9P243 1243 aa7.52□□□□□ -1.21
GPNMB-207ENST00000468723 MKL2Q9ULH7 1088 aa7.52□□□□□ -1.21
GPNMB-207ENST00000468723 PHF20L1A8MW92 1017 aa7.51□□□□□ -1.21
GPNMB-207ENST00000468723 ABL1P00519 1130 aa7.51□□□□□ -1.21
GPNMB-207ENST00000468723 RARAP10276 462 aa7.51□□□□□ -1.21
GPNMB-207ENST00000468723 C8orf86Q6ZUL3 223 aa7.51□□□□□ -1.21
GPNMB-207ENST00000468723 ABTB2Q8N961 1025 aa7.51□□□□□ -1.21
GPNMB-207ENST00000468723 HELQQ8TDG4 1101 aa7.51□□□□□ -1.21
GPNMB-207ENST00000468723 ANO2Q9NQ90 1003 aa7.51□□□□□ -1.21
GPNMB-207ENST00000468723 DNAJB12Q9NXW2 375 aaKnown RBP7.51□□□□□ -1.21
GPNMB-207ENST00000468723 STARD13Q9Y3M8 1113 aa7.51□□□□□ -1.21
GPNMB-207ENST00000468723 KCNMB2Q9Y691 235 aa7.51□□□□□ -1.21
GPNMB-207ENST00000468723 GDF11O95390 407 aa7.5□□□□□ -1.21
GPNMB-207ENST00000468723 DGKGP49619 791 aa7.5□□□□□ -1.21
GPNMB-207ENST00000468723 MLLT1Q03111 559 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms