RNA–Protein interactions for RNA: ENST00000468544.1

NPM3-203, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

TSL 5

Gene NPM3, Length 393 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-203ENST00000468544 NUTM1Q86Y26 1132 aa12.93□□□□□ -0.34
NPM3-203ENST00000468544 CCDC191Q8NCU4 936 aa12.93□□□□□ -0.34
NPM3-203ENST00000468544 PANK1Q8TE04 598 aa12.93□□□□□ -0.34
NPM3-203ENST00000468544 UTP14AQ9BVJ6 771 aaKnown RBP12.93□□□□□ -0.34
NPM3-203ENST00000468544 CWC25Q9NXE8 425 aaPredicted RBP12.93□□□□□ -0.34
NPM3-203ENST00000468544 COL24A1Q17RW2 1714 aa12.93□□□□□ -0.34
NPM3-203ENST00000468544 ERFEQ4G0M1 354 aa12.92□□□□□ -0.34
NPM3-203ENST00000468544 INTS3Q68E01 1043 aaKnown RBP12.92□□□□□ -0.34
NPM3-203ENST00000468544 TPTE2Q6XPS3 522 aa12.92□□□□□ -0.34
NPM3-203ENST00000468544 TMEM57Q8N5G2 664 aa12.92□□□□□ -0.34
NPM3-203ENST00000468544 FAM89AQ96GI7 184 aa12.92□□□□□ -0.34
NPM3-203ENST00000468544 SRCIN1Q9C0H9 1055 aa12.92□□□□□ -0.34
NPM3-203ENST00000468544 TRMT112Q9UI30 125 aaKnown RBP12.92□□□□□ -0.34
NPM3-203ENST00000468544 SUPT16HQ9Y5B9 1047 aaKnown RBP12.92□□□□□ -0.34
NPM3-203ENST00000468544 CASP7P55210 303 aa12.91□□□□□ -0.34
NPM3-203ENST00000468544 RRP1P56182 461 aaKnown RBP12.91□□□□□ -0.34
NPM3-203ENST00000468544 PPP1R42Q7Z4L9 355 aa12.91□□□□□ -0.34
NPM3-203ENST00000468544 DZIP1LQ8IYY4 767 aaKnown RBP12.91□□□□□ -0.34
NPM3-203ENST00000468544 CNBD1Q8NA66 436 aa12.91□□□□□ -0.34
NPM3-203ENST00000468544 RNF123Q5XPI4 1314 aa12.9□□□□□ -0.34
NPM3-203ENST00000468544 H7C1W4 665 aa12.9□□□□□ -0.34
NPM3-203ENST00000468544 ALDH1L1O75891 902 aa12.9□□□□□ -0.34
NPM3-203ENST00000468544 HCLS1P14317 486 aaPredicted RBP12.9□□□□□ -0.34
NPM3-203ENST00000468544 CCT4P50991 539 aaKnown RBP12.9□□□□□ -0.34
NPM3-203ENST00000468544 C3orf67Q6ZVT6 689 aa12.9□□□□□ -0.34
NPM3-203ENST00000468544 ZBTB38Q8NAP3 1195 aaPredicted RBP12.9□□□□□ -0.34
NPM3-203ENST00000468544 NYXQ9GZU5 481 aa12.9□□□□□ -0.34
NPM3-203ENST00000468544 USP44Q9H0E7 712 aa12.9□□□□□ -0.34
NPM3-203ENST00000468544 ABCC12Q96J65 1359 aa12.9□□□□□ -0.34
NPM3-203ENST00000468544 PCCAP05165 728 aaPredicted RBP12.89□□□□□ -0.35
NPM3-203ENST00000468544 NBPF7P0C2Y1 421 aaPredicted RBP12.89□□□□□ -0.35
NPM3-203ENST00000468544 SLC10A5Q5PT55 438 aa12.89□□□□□ -0.35
NPM3-203ENST00000468544 UBE3BQ7Z3V4 1068 aa12.89□□□□□ -0.35
NPM3-203ENST00000468544 FTSJ3Q8IY81 847 aaKnown RBP12.89□□□□□ -0.35
NPM3-203ENST00000468544 IBTKQ9P2D0 1353 aaPredicted RBP12.89□□□□□ -0.35
NPM3-203ENST00000468544 PXDNLA1KZ92 1463 aa12.89□□□□□ -0.35
NPM3-203ENST00000468544 ANKRD36CQ5JPF3 1778 aa12.89□□□□□ -0.35
NPM3-203ENST00000468544 SH3TC1Q8TE82 1336 aa12.88□□□□□ -0.35
NPM3-203ENST00000468544 AFDNP55196 1824 aaKnown RBP12.88□□□□□ -0.35
NPM3-203ENST00000468544 GRM8O00222 908 aa12.88□□□□□ -0.35
NPM3-203ENST00000468544 NPHP1O15259 732 aa12.88□□□□□ -0.35
NPM3-203ENST00000468544 GTF2E1P29083 439 aaPredicted RBP12.88□□□□□ -0.35
NPM3-203ENST00000468544 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.88□□□□□ -0.35
NPM3-203ENST00000468544 MEIS3Q99687 375 aa12.88□□□□□ -0.35
NPM3-203ENST00000468544 PPP1R1BQ9UD71 204 aaPredicted RBP12.88□□□□□ -0.35
NPM3-203ENST00000468544 COG6Q9Y2V7 657 aa12.88□□□□□ -0.35
NPM3-203ENST00000468544 NRXN2Q9P2S2 1712 aa12.88□□□□□ -0.35
NPM3-203ENST00000468544 IRS4O14654 1257 aaPredicted RBP12.87□□□□□ -0.35
NPM3-203ENST00000468544 ST5P78524 1137 aa12.87□□□□□ -0.35
NPM3-203ENST00000468544 PDE3AQ14432 1141 aa12.87□□□□□ -0.35
NPM3-203ENST00000468544 KAZALD1Q96I82 304 aa12.87□□□□□ -0.35
NPM3-203ENST00000468544 BRIP1Q9BX63 1249 aa12.87□□□□□ -0.35
NPM3-203ENST00000468544 FHDC1Q9C0D6 1143 aaPredicted RBP12.87□□□□□ -0.35
NPM3-203ENST00000468544 C9orf78Q9NZ63 289 aaPredicted RBP12.87□□□□□ -0.35
NPM3-203ENST00000468544 C10orf71Q711Q0 1435 aa12.87□□□□□ -0.35
NPM3-203ENST00000468544 UTYO14607 1347 aa12.87□□□□□ -0.35
NPM3-203ENST00000468544 KLRG2A4D1S0 409 aaPredicted RBP12.86□□□□□ -0.35
NPM3-203ENST00000468544 EPHA10Q5JZY3 1008 aa12.86□□□□□ -0.35
NPM3-203ENST00000468544 ITPRIPQ8IWB1 547 aa12.86□□□□□ -0.35
NPM3-203ENST00000468544 KLHL34Q8N239 644 aa12.86□□□□□ -0.35
NPM3-203ENST00000468544 CDHR2Q9BYE9 1310 aa12.86□□□□□ -0.35
NPM3-203ENST00000468544 A0A0G2JLW4 131 aa12.85□□□□□ -0.35
NPM3-203ENST00000468544 ZBTB7BO15156 539 aaPredicted RBP12.85□□□□□ -0.35
NPM3-203ENST00000468544 MS4A1P11836 297 aa12.85□□□□□ -0.35
NPM3-203ENST00000468544 CHRNA5P30532 468 aa12.85□□□□□ -0.35
NPM3-203ENST00000468544 FOXO4P98177 505 aa12.85□□□□□ -0.35
NPM3-203ENST00000468544 MVPQ14764 893 aaKnown RBP12.85□□□□□ -0.35
NPM3-203ENST00000468544 NLGN2Q8NFZ4 835 aa12.85□□□□□ -0.35
NPM3-203ENST00000468544 SUCLG2Q96I99 432 aa12.85□□□□□ -0.35
NPM3-203ENST00000468544 CD2APQ9Y5K6 639 aa12.85□□□□□ -0.35
NPM3-203ENST00000468544 PDE8AO60658 829 aa12.84□□□□□ -0.35
NPM3-203ENST00000468544 DPEP1P16444 411 aa12.84□□□□□ -0.35
NPM3-203ENST00000468544 KCNA3P22001 575 aa12.84□□□□□ -0.35
NPM3-203ENST00000468544 CRY2Q49AN0 593 aa12.84□□□□□ -0.35
NPM3-203ENST00000468544 NLRP3Q96P20 1036 aa12.84□□□□□ -0.35
NPM3-203ENST00000468544 SYT17Q9BSW7 474 aa12.84□□□□□ -0.35
NPM3-203ENST00000468544 PLA2G12BQ9BX93 195 aa12.84□□□□□ -0.35
NPM3-203ENST00000468544 ANKRD31Q8N7Z5 1873 aa12.83□□□□□ -0.36
NPM3-203ENST00000468544 CENPBP07199 599 aaPredicted RBP12.83□□□□□ -0.36
NPM3-203ENST00000468544 PDE6BP35913 854 aa12.83□□□□□ -0.36
NPM3-203ENST00000468544 C2CD5Q86YS7 1000 aa12.83□□□□□ -0.36
NPM3-203ENST00000468544 TTLL11Q8NHH1 800 aa12.83□□□□□ -0.36
NPM3-203ENST00000468544 CCDC85AQ96PX6 553 aaPredicted RBP12.83□□□□□ -0.36
NPM3-203ENST00000468544 RIC1Q4ADV7 1423 aa12.82□□□□□ -0.36
NPM3-203ENST00000468544 GOLGB1Q14789 3259 aaKnown RBP12.82□□□□□ -0.36
NPM3-203ENST00000468544 CSF1RP07333 972 aa12.82□□□□□ -0.36
NPM3-203ENST00000468544 UBTFL1P0CB47 393 aaPredicted RBP12.82□□□□□ -0.36
NPM3-203ENST00000468544 SRGNP10124 158 aa12.82□□□□□ -0.36
NPM3-203ENST00000468544 CTSWP56202 376 aa12.82□□□□□ -0.36
NPM3-203ENST00000468544 TGFB2P61812 414 aa12.82□□□□□ -0.36
NPM3-203ENST00000468544 IRX6P78412 446 aaPredicted RBP12.82□□□□□ -0.36
NPM3-203ENST00000468544 SF3B3Q15393 1217 aaKnown RBP12.82□□□□□ -0.36
NPM3-203ENST00000468544 ANKRD44Q8N8A2 993 aa12.82□□□□□ -0.36
NPM3-203ENST00000468544 CRBNQ96SW2 442 aa12.82□□□□□ -0.36
NPM3-203ENST00000468544 BICC1Q9H694 974 aaKnown RBP12.82□□□□□ -0.36
NPM3-203ENST00000468544 LRRFIP2Q9Y608 721 aaKnown RBP12.82□□□□□ -0.36
NPM3-203ENST00000468544 TNRC6CQ9HCJ0 1690 aaKnown RBP12.82□□□□□ -0.36
NPM3-203ENST00000468544 N4BP2Q86UW6 1770 aaPredicted RBP12.81□□□□□ -0.36
NPM3-203ENST00000468544 LRP5O75197 1615 aa12.81□□□□□ -0.36
NPM3-203ENST00000468544 H0YIN7 160 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms