RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 CCDC183Q5T5S1 534 aa18.93■□□□□ 0.62
TSPAN4-211ENST00000468468 ERC1Q8IUD2 1116 aa18.93■□□□□ 0.62
TSPAN4-211ENST00000468468 PDCL3Q9H2J4 239 aa18.93■□□□□ 0.62
TSPAN4-211ENST00000468468 PDRG1Q9NUG6 133 aa18.93■□□□□ 0.62
TSPAN4-211ENST00000468468 TCHHQ07283 1943 aa18.93■□□□□ 0.62
TSPAN4-211ENST00000468468 CRYBG1Q9Y4K1 1723 aa18.93■□□□□ 0.62
TSPAN4-211ENST00000468468 ADCK5Q3MIX3 580 aa18.93■□□□□ 0.62
TSPAN4-211ENST00000468468 CCDC83Q8IWF9 413 aa18.93■□□□□ 0.62
TSPAN4-211ENST00000468468 TERF1P54274 439 aa18.92■□□□□ 0.62
TSPAN4-211ENST00000468468 AACSQ86V21 672 aa18.92■□□□□ 0.62
TSPAN4-211ENST00000468468 HDAC5Q9UQL6 1122 aa18.92■□□□□ 0.62
TSPAN4-211ENST00000468468 ATP6V1DQ9Y5K8 247 aa18.92■□□□□ 0.62
TSPAN4-211ENST00000468468 PHKG2P15735 406 aa18.91■□□□□ 0.62
TSPAN4-211ENST00000468468 UBE2HP62256 183 aa18.91■□□□□ 0.62
TSPAN4-211ENST00000468468 VPS53Q5VIR6 699 aa18.91■□□□□ 0.62
TSPAN4-211ENST00000468468 EVI5LQ96CN4 794 aa18.91■□□□□ 0.62
TSPAN4-211ENST00000468468 KDM6AO15550 1401 aaPredicted RBP18.91■□□□□ 0.62
TSPAN4-211ENST00000468468 HEG1Q9ULI3 1381 aa18.91■□□□□ 0.62
TSPAN4-211ENST00000468468 STRCQ7RTU9 1775 aa18.91■□□□□ 0.62
TSPAN4-211ENST00000468468 GJB2P29033 226 aa18.91■□□□□ 0.62
TSPAN4-211ENST00000468468 FAM184AQ8NB25 1140 aa18.91■□□□□ 0.62
TSPAN4-211ENST00000468468 CYP46A1Q9Y6A2 500 aa18.91■□□□□ 0.62
TSPAN4-211ENST00000468468 FIBPO43427 364 aa18.9■□□□□ 0.62
TSPAN4-211ENST00000468468 DTNBO60941 627 aa18.9■□□□□ 0.62
TSPAN4-211ENST00000468468 CSPP1Q1MSJ5 1256 aa18.9■□□□□ 0.62
TSPAN4-211ENST00000468468 ZSWIM6Q9HCJ5 1215 aa18.9■□□□□ 0.62
TSPAN4-211ENST00000468468 UVSSAQ2YD98 709 aa18.9■□□□□ 0.62
TSPAN4-211ENST00000468468 NFATC2IPQ8NCF5 419 aa18.9■□□□□ 0.62
TSPAN4-211ENST00000468468 ZSCAN31Q96LW9 406 aaPredicted RBP18.9■□□□□ 0.62
TSPAN4-211ENST00000468468 LETM1O95202 739 aaPredicted RBP18.89■□□□□ 0.62
TSPAN4-211ENST00000468468 TM6SF1Q9BZW5 370 aa18.89■□□□□ 0.62
TSPAN4-211ENST00000468468 DDX54Q8TDD1 881 aaKnown RBP18.89■□□□□ 0.61
TSPAN4-211ENST00000468468 KCNB2Q92953 911 aa18.89■□□□□ 0.61
TSPAN4-211ENST00000468468 SLC52A2Q9HAB3 445 aa18.89■□□□□ 0.61
TSPAN4-211ENST00000468468 NECTIN1Q15223 517 aa18.88■□□□□ 0.61
TSPAN4-211ENST00000468468 SUCLG2Q96I99 432 aa18.88■□□□□ 0.61
TSPAN4-211ENST00000468468 SH2B1Q9NRF2 756 aaPredicted RBP18.88■□□□□ 0.61
TSPAN4-211ENST00000468468 SLAIN2Q9P270 581 aa18.88■□□□□ 0.61
TSPAN4-211ENST00000468468 SIPA1L3O60292 1781 aaPredicted RBP18.88■□□□□ 0.61
TSPAN4-211ENST00000468468 ZKSCAN1P17029 563 aaPredicted RBP18.88■□□□□ 0.61
TSPAN4-211ENST00000468468 CCDC171Q6TFL3 1326 aa18.88■□□□□ 0.61
TSPAN4-211ENST00000468468 ADAMTS7Q9UKP4 1686 aa18.88■□□□□ 0.61
TSPAN4-211ENST00000468468 CYP27B1O15528 508 aa18.87■□□□□ 0.61
TSPAN4-211ENST00000468468 KCNJ4P48050 445 aa18.87■□□□□ 0.61
TSPAN4-211ENST00000468468 G3BP1Q13283 466 aaKnown RBP eCLIP18.87■□□□□ 0.61
TSPAN4-211ENST00000468468 ZNF790Q6PG37 636 aa18.87■□□□□ 0.61
TSPAN4-211ENST00000468468 IFNL2Q8IZJ0 200 aa18.87■□□□□ 0.61
TSPAN4-211ENST00000468468 LINS1Q8NG48 757 aa18.87■□□□□ 0.61
TSPAN4-211ENST00000468468 MTMR6Q9Y217 621 aa18.87■□□□□ 0.61
TSPAN4-211ENST00000468468 GRM8O00222 908 aa18.87■□□□□ 0.61
TSPAN4-211ENST00000468468 SASH1O94885 1247 aa18.87■□□□□ 0.61
TSPAN4-211ENST00000468468 AIMP1Q12904 312 aaKnown RBP18.87■□□□□ 0.61
TSPAN4-211ENST00000468468 CCDC8Q9H0W5 538 aaPredicted RBP18.87■□□□□ 0.61
TSPAN4-211ENST00000468468 RBM8AQ9Y5S9 174 aaKnown RBP18.87■□□□□ 0.61
TSPAN4-211ENST00000468468 DNM1Q05193 864 aaKnown RBP18.87■□□□□ 0.61
TSPAN4-211ENST00000468468 FAM227BQ96M60 508 aa18.87■□□□□ 0.61
TSPAN4-211ENST00000468468 BICC1Q9H694 974 aaKnown RBP18.87■□□□□ 0.61
TSPAN4-211ENST00000468468 USP25Q9UHP3 1055 aa18.87■□□□□ 0.61
TSPAN4-211ENST00000468468 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.87■□□□□ 0.61
TSPAN4-211ENST00000468468 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.87■□□□□ 0.61
TSPAN4-211ENST00000468468 CPDO75976 1380 aa18.86■□□□□ 0.61
TSPAN4-211ENST00000468468 ME3Q16798 604 aa18.86■□□□□ 0.61
TSPAN4-211ENST00000468468 CREB3L3Q68CJ9 461 aa18.86■□□□□ 0.61
TSPAN4-211ENST00000468468 EAF2Q96CJ1 260 aaPredicted RBP18.86■□□□□ 0.61
TSPAN4-211ENST00000468468 KAZALD1Q96I82 304 aa18.86■□□□□ 0.61
TSPAN4-211ENST00000468468 HCLS1P14317 486 aaPredicted RBP18.86■□□□□ 0.61
TSPAN4-211ENST00000468468 NMIQ13287 307 aaPredicted RBP18.86■□□□□ 0.61
TSPAN4-211ENST00000468468 PRDM11Q9NQV5 511 aa18.86■□□□□ 0.61
TSPAN4-211ENST00000468468 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.86■□□□□ 0.61
TSPAN4-211ENST00000468468 DDX58O95786 925 aaKnown RBP18.85■□□□□ 0.61
TSPAN4-211ENST00000468468 NECAB1Q8N987 351 aa18.85■□□□□ 0.61
TSPAN4-211ENST00000468468 ARID3AQ99856 593 aa18.85■□□□□ 0.61
TSPAN4-211ENST00000468468 VPS37CA5D8V6 355 aaPredicted RBP18.85■□□□□ 0.61
TSPAN4-211ENST00000468468 HIP1O00291 1037 aa18.85■□□□□ 0.61
TSPAN4-211ENST00000468468 ST3GAL1Q11201 340 aa18.85■□□□□ 0.61
TSPAN4-211ENST00000468468 MAP4K1Q92918 833 aa18.85■□□□□ 0.61
TSPAN4-211ENST00000468468 MPNDQ8N594 471 aa18.84■□□□□ 0.61
TSPAN4-211ENST00000468468 KIAA2012Q0VF49 1180 aa18.84■□□□□ 0.61
TSPAN4-211ENST00000468468 DDX21Q9NR30 783 aaKnown RBP eCLIP18.84■□□□□ 0.61
TSPAN4-211ENST00000468468 SCN11AQ9UI33 1791 aa18.84■□□□□ 0.61
TSPAN4-211ENST00000468468 UTYO14607 1347 aa18.83■□□□□ 0.61
TSPAN4-211ENST00000468468 SOS2Q07890 1332 aaPredicted RBP18.83■□□□□ 0.61
TSPAN4-211ENST00000468468 PDIA6Q15084 440 aa18.83■□□□□ 0.61
TSPAN4-211ENST00000468468 ZNF496Q96IT1 587 aaPredicted RBP18.83■□□□□ 0.61
TSPAN4-211ENST00000468468 SIL1Q9H173 461 aa18.83■□□□□ 0.61
TSPAN4-211ENST00000468468 BOLA2Q9H3K6 86 aa18.83■□□□□ 0.61
TSPAN4-211ENST00000468468 TLR7Q9NYK1 1049 aaKnown RBP18.83■□□□□ 0.61
TSPAN4-211ENST00000468468 TPCN1Q9ULQ1 816 aa18.83■□□□□ 0.61
TSPAN4-211ENST00000468468 UQCRHLA0A096LP55 91 aa18.83■□□□□ 0.6
TSPAN4-211ENST00000468468 ADCY5O95622 1261 aa18.83■□□□□ 0.6
TSPAN4-211ENST00000468468 UQCRHP07919 91 aa18.83■□□□□ 0.6
TSPAN4-211ENST00000468468 FGD1P98174 961 aa18.83■□□□□ 0.6
TSPAN4-211ENST00000468468 GIMAP6Q6P9H5 292 aa18.83■□□□□ 0.6
TSPAN4-211ENST00000468468 SLC27A2O14975 620 aa18.82■□□□□ 0.6
TSPAN4-211ENST00000468468 MYL6BP14649 208 aa18.82■□□□□ 0.6
TSPAN4-211ENST00000468468 PSMA5P28066 241 aa18.82■□□□□ 0.6
TSPAN4-211ENST00000468468 RIC3Q7Z5B4 369 aa18.82■□□□□ 0.6
TSPAN4-211ENST00000468468 DCAF5Q96JK2 942 aa18.82■□□□□ 0.6
TSPAN4-211ENST00000468468 FSD1Q9BTV5 496 aa18.82■□□□□ 0.6
TSPAN4-211ENST00000468468 TOM1L2Q6ZVM7 507 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms