RNA–Protein interactions for RNA: ENST00000468214.1

PCOLCE-204, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 4

Gene PCOLCE, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-204ENST00000468214 SBF1O95248 1867 aa18.99■□□□□ 0.63
PCOLCE-204ENST00000468214 ABCC12Q96J65 1359 aa18.99■□□□□ 0.63
PCOLCE-204ENST00000468214 IBTKQ9P2D0 1353 aaPredicted RBP18.99■□□□□ 0.63
PCOLCE-204ENST00000468214 C1QTNF8P60827 252 aa18.99■□□□□ 0.63
PCOLCE-204ENST00000468214 ERFEQ4G0M1 354 aa18.99■□□□□ 0.63
PCOLCE-204ENST00000468214 PARP10Q53GL7 1025 aa18.99■□□□□ 0.63
PCOLCE-204ENST00000468214 HSP90AB3PQ58FF7 597 aa18.99■□□□□ 0.63
PCOLCE-204ENST00000468214 CCDC30Q5VVM6 783 aa18.99■□□□□ 0.63
PCOLCE-204ENST00000468214 SUSD4Q5VX71 490 aa18.99■□□□□ 0.63
PCOLCE-204ENST00000468214 PPP1R42Q7Z4L9 355 aa18.99■□□□□ 0.63
PCOLCE-204ENST00000468214 LMNB1P20700 586 aa18.98■□□□□ 0.63
PCOLCE-204ENST00000468214 SLX4Q8IY92 1834 aa18.97■□□□□ 0.63
PCOLCE-204ENST00000468214 KLRG2A4D1S0 409 aaPredicted RBP18.97■□□□□ 0.63
PCOLCE-204ENST00000468214 VAMP4O75379 141 aa18.97■□□□□ 0.63
PCOLCE-204ENST00000468214 SOGA3Q5TF21 947 aa18.97■□□□□ 0.63
PCOLCE-204ENST00000468214 STK31Q9BXU1 1019 aa18.97■□□□□ 0.63
PCOLCE-204ENST00000468214 HYPKQ9NX55 129 aa18.97■□□□□ 0.63
PCOLCE-204ENST00000468214 NFKBIEO00221 500 aa18.96■□□□□ 0.63
PCOLCE-204ENST00000468214 NTSR2O95665 410 aa18.96■□□□□ 0.63
PCOLCE-204ENST00000468214 UTP14AQ9BVJ6 771 aaKnown RBP18.96■□□□□ 0.63
PCOLCE-204ENST00000468214 TNRC6CQ9HCJ0 1690 aaKnown RBP18.95■□□□□ 0.62
PCOLCE-204ENST00000468214 TCERG1O14776 1098 aaKnown RBP18.95■□□□□ 0.62
PCOLCE-204ENST00000468214 RPGRQ92834 1020 aaKnown RBP18.95■□□□□ 0.62
PCOLCE-204ENST00000468214 CCDC88AQ3V6T2 1871 aa18.94■□□□□ 0.62
PCOLCE-204ENST00000468214 ALDH1B1P30837 517 aa18.94■□□□□ 0.62
PCOLCE-204ENST00000468214 TCIRG1Q13488 830 aa18.94■□□□□ 0.62
PCOLCE-204ENST00000468214 PLBD2Q8NHP8 589 aa18.94■□□□□ 0.62
PCOLCE-204ENST00000468214 TAOK3Q9H2K8 898 aa18.94■□□□□ 0.62
PCOLCE-204ENST00000468214 RIC1Q4ADV7 1423 aa18.93■□□□□ 0.62
PCOLCE-204ENST00000468214 FER1L6Q2WGJ9 1857 aa18.93■□□□□ 0.62
PCOLCE-204ENST00000468214 CRY2Q49AN0 593 aa18.93■□□□□ 0.62
PCOLCE-204ENST00000468214 CCDC93Q567U6 631 aa18.93■□□□□ 0.62
PCOLCE-204ENST00000468214 ANKRD13DQ6ZTN6 518 aa18.93■□□□□ 0.62
PCOLCE-204ENST00000468214 NLRP10Q86W26 655 aa18.93■□□□□ 0.62
PCOLCE-204ENST00000468214 KDM2BQ8NHM5 1336 aa18.93■□□□□ 0.62
PCOLCE-204ENST00000468214 ZC3H4Q9UPT8 1303 aaKnown RBP18.93■□□□□ 0.62
PCOLCE-204ENST00000468214 TRMT112Q9UI30 125 aaKnown RBP18.92■□□□□ 0.62
PCOLCE-204ENST00000468214 RNF123Q5XPI4 1314 aa18.92■□□□□ 0.62
PCOLCE-204ENST00000468214 CT47B1P0C2W7 299 aaPredicted RBP18.91■□□□□ 0.62
PCOLCE-204ENST00000468214 PRELPP51888 382 aa18.91■□□□□ 0.62
PCOLCE-204ENST00000468214 RBM17Q96I25 401 aaKnown RBP18.91■□□□□ 0.62
PCOLCE-204ENST00000468214 NLRP3Q96P20 1036 aa18.91■□□□□ 0.62
PCOLCE-204ENST00000468214 NMRK2Q9NPI5 230 aa18.91■□□□□ 0.62
PCOLCE-204ENST00000468214 LTBP3Q9NS15 1303 aa18.91■□□□□ 0.62
PCOLCE-204ENST00000468214 KIF3CO14782 793 aa18.9■□□□□ 0.62
PCOLCE-204ENST00000468214 SLC4A2P04920 1241 aa18.9■□□□□ 0.62
PCOLCE-204ENST00000468214 RIC3Q7Z5B4 369 aa18.9■□□□□ 0.62
PCOLCE-204ENST00000468214 ZNF428Q96B54 188 aa18.9■□□□□ 0.62
PCOLCE-204ENST00000468214 PHAXQ9H814 394 aaKnown RBP18.9■□□□□ 0.62
PCOLCE-204ENST00000468214 TIAM2Q8IVF5 1701 aa18.89■□□□□ 0.61
PCOLCE-204ENST00000468214 C7orf43Q8WVR3 580 aa18.89■□□□□ 0.61
PCOLCE-204ENST00000468214 SH3TC1Q8TE82 1336 aa18.89■□□□□ 0.61
PCOLCE-204ENST00000468214 ATP5J2-PTCD1G3V325 749 aa18.88■□□□□ 0.61
PCOLCE-204ENST00000468214 HCLS1P14317 486 aaPredicted RBP18.88■□□□□ 0.61
PCOLCE-204ENST00000468214 HOXA10P31260 410 aaPredicted RBP18.88■□□□□ 0.61
PCOLCE-204ENST00000468214 SLC10A5Q5PT55 438 aa18.88■□□□□ 0.61
PCOLCE-204ENST00000468214 IFFO2Q5TF58 517 aa18.88■□□□□ 0.61
PCOLCE-204ENST00000468214 OLFM4Q6UX06 510 aa18.88■□□□□ 0.61
PCOLCE-204ENST00000468214 C3orf67Q6ZVT6 689 aa18.88■□□□□ 0.61
PCOLCE-204ENST00000468214 C16orf71Q8IYS4 520 aaPredicted RBP18.88■□□□□ 0.61
PCOLCE-204ENST00000468214 RTKN2Q8IZC4 609 aa18.88■□□□□ 0.61
PCOLCE-204ENST00000468214 DDX58O95786 925 aaKnown RBP18.87■□□□□ 0.61
PCOLCE-204ENST00000468214 G2E3Q7L622 706 aa18.87■□□□□ 0.61
PCOLCE-204ENST00000468214 CRAMP1Q96RY5 1269 aa18.87■□□□□ 0.61
PCOLCE-204ENST00000468214 ISCA1Q9BUE6 129 aa18.87■□□□□ 0.61
PCOLCE-204ENST00000468214 DICER1Q9UPY3 1922 aaKnown RBP18.87■□□□□ 0.61
PCOLCE-204ENST00000468214 MYH3P11055 1940 aa18.86■□□□□ 0.61
PCOLCE-204ENST00000468214 FKBP4Q02790 459 aaKnown RBP eCLIP18.86■□□□□ 0.61
PCOLCE-204ENST00000468214 ALDH1L2Q3SY69 923 aa18.86■□□□□ 0.61
PCOLCE-204ENST00000468214 SYNE4Q8N205 404 aa18.86■□□□□ 0.61
PCOLCE-204ENST00000468214 SSH1Q8WYL5 1049 aa18.86■□□□□ 0.61
PCOLCE-204ENST00000468214 LAMB2P55268 1798 aa18.86■□□□□ 0.61
PCOLCE-204ENST00000468214 GLTPD2A6NH11 291 aa18.85■□□□□ 0.61
PCOLCE-204ENST00000468214 PPEF1O14829 653 aaPredicted RBP18.85■□□□□ 0.61
PCOLCE-204ENST00000468214 FLIIQ13045 1269 aa18.85■□□□□ 0.61
PCOLCE-204ENST00000468214 CC2D2BQ6DHV5 1058 aa18.85■□□□□ 0.61
PCOLCE-204ENST00000468214 DPY19L2Q6NUT2 758 aa18.85■□□□□ 0.61
PCOLCE-204ENST00000468214 BCL2L13Q9BXK5 485 aa18.85■□□□□ 0.61
PCOLCE-204ENST00000468214 TMX4Q9H1E5 349 aaPredicted RBP18.85■□□□□ 0.61
PCOLCE-204ENST00000468214 RRAGCQ9HB90 399 aa18.85■□□□□ 0.61
PCOLCE-204ENST00000468214 ZNF277Q9NRM2 450 aaPredicted RBP18.85■□□□□ 0.61
PCOLCE-204ENST00000468214 SMC4Q9NTJ3 1288 aa18.85■□□□□ 0.61
PCOLCE-204ENST00000468214 TOMM70O94826 608 aa18.84■□□□□ 0.61
PCOLCE-204ENST00000468214 FKBP5Q13451 457 aaPredicted RBP18.84■□□□□ 0.61
PCOLCE-204ENST00000468214 MYD88Q99836 296 aa18.84■□□□□ 0.61
PCOLCE-204ENST00000468214 RTL5Q5HYW3 569 aaPredicted RBP18.83■□□□□ 0.6
PCOLCE-204ENST00000468214 DDX46Q7L014 1031 aaKnown RBP18.83■□□□□ 0.6
PCOLCE-204ENST00000468214 MRPL50Q8N5N7 158 aaKnown RBP18.83■□□□□ 0.6
PCOLCE-204ENST00000468214 FAM89AQ96GI7 184 aa18.83■□□□□ 0.6
PCOLCE-204ENST00000468214 DDX60Q8IY21 1712 aaKnown RBP18.83■□□□□ 0.6
PCOLCE-204ENST00000468214 RARSP54136 660 aaKnown RBP18.82■□□□□ 0.6
PCOLCE-204ENST00000468214 TRIM28Q13263 835 aaKnown RBP18.82■□□□□ 0.6
PCOLCE-204ENST00000468214 ABCC4O15439 1325 aa18.81■□□□□ 0.6
PCOLCE-204ENST00000468214 PI4KAP2A4QPH2 592 aa18.81■□□□□ 0.6
PCOLCE-204ENST00000468214 IARSP41252 1262 aaKnown RBP18.81■□□□□ 0.6
PCOLCE-204ENST00000468214 GRIPAP1Q4V328 841 aa18.81■□□□□ 0.6
PCOLCE-204ENST00000468214 KSR2Q6VAB6 950 aa18.81■□□□□ 0.6
PCOLCE-204ENST00000468214 PI4KAP1Q8N8J0 262 aa18.81■□□□□ 0.6
PCOLCE-204ENST00000468214 MAP3K2Q9Y2U5 619 aa18.81■□□□□ 0.6
PCOLCE-204ENST00000468214 CEP350Q5VT06 3117 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms