RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 DLEC1Q9Y238 1755 aa18.87■□□□□ 0.61
COMMD3-206ENST00000468179 UBN2Q6ZU65 1347 aa18.86■□□□□ 0.61
COMMD3-206ENST00000468179 ZC3H4Q9UPT8 1303 aaKnown RBP18.86■□□□□ 0.61
COMMD3-206ENST00000468179 ELL2O00472 640 aaPredicted RBP18.86■□□□□ 0.61
COMMD3-206ENST00000468179 ERFEQ4G0M1 354 aa18.86■□□□□ 0.61
COMMD3-206ENST00000468179 NUTM1Q86Y26 1132 aa18.86■□□□□ 0.61
COMMD3-206ENST00000468179 WDR63Q8IWG1 891 aa18.86■□□□□ 0.61
COMMD3-206ENST00000468179 FAM9BQ8IZU0 186 aa18.86■□□□□ 0.61
COMMD3-206ENST00000468179 ANKRD31Q8N7Z5 1873 aa18.85■□□□□ 0.61
COMMD3-206ENST00000468179 NTSR2O95665 410 aa18.85■□□□□ 0.61
COMMD3-206ENST00000468179 C1QTNF8P60827 252 aa18.85■□□□□ 0.61
COMMD3-206ENST00000468179 RPGRQ92834 1020 aaKnown RBP18.85■□□□□ 0.61
COMMD3-206ENST00000468179 RIC1Q4ADV7 1423 aa18.85■□□□□ 0.61
COMMD3-206ENST00000468179 KDM2BQ8NHM5 1336 aa18.84■□□□□ 0.61
COMMD3-206ENST00000468179 GOLGA2Q08379 1002 aa18.84■□□□□ 0.61
COMMD3-206ENST00000468179 CRY2Q49AN0 593 aa18.84■□□□□ 0.61
COMMD3-206ENST00000468179 C8orf58Q8NAV2 365 aa18.84■□□□□ 0.61
COMMD3-206ENST00000468179 NLRP3Q96P20 1036 aa18.84■□□□□ 0.61
COMMD3-206ENST00000468179 GOLGB1Q14789 3259 aaKnown RBP18.84■□□□□ 0.61
COMMD3-206ENST00000468179 LTBP3Q9NS15 1303 aa18.83■□□□□ 0.61
COMMD3-206ENST00000468179 RASSF7Q02833 373 aa18.83■□□□□ 0.61
COMMD3-206ENST00000468179 CCDC93Q567U6 631 aa18.83■□□□□ 0.61
COMMD3-206ENST00000468179 SLC10A5Q5PT55 438 aa18.83■□□□□ 0.61
COMMD3-206ENST00000468179 NLRP10Q86W26 655 aa18.83■□□□□ 0.61
COMMD3-206ENST00000468179 RBM17Q96I25 401 aaKnown RBP18.83■□□□□ 0.61
COMMD3-206ENST00000468179 NUP98P52948 1817 aa18.83■□□□□ 0.6
COMMD3-206ENST00000468179 NFKBIEO00221 500 aa18.82■□□□□ 0.6
COMMD3-206ENST00000468179 DDX58O95786 925 aaKnown RBP18.82■□□□□ 0.6
COMMD3-206ENST00000468179 RIC3Q7Z5B4 369 aa18.82■□□□□ 0.6
COMMD3-206ENST00000468179 RTKN2Q8IZC4 609 aa18.82■□□□□ 0.6
COMMD3-206ENST00000468179 STK31Q9BXU1 1019 aa18.82■□□□□ 0.6
COMMD3-206ENST00000468179 TAOK3Q9H2K8 898 aa18.82■□□□□ 0.6
COMMD3-206ENST00000468179 TRMT112Q9UI30 125 aaKnown RBP18.82■□□□□ 0.6
COMMD3-206ENST00000468179 HOXA10P31260 410 aaPredicted RBP18.81■□□□□ 0.6
COMMD3-206ENST00000468179 GRIPAP1Q4V328 841 aa18.81■□□□□ 0.6
COMMD3-206ENST00000468179 CC2D2BQ6DHV5 1058 aa18.81■□□□□ 0.6
COMMD3-206ENST00000468179 TSR2Q969E8 191 aaKnown RBP18.81■□□□□ 0.6
COMMD3-206ENST00000468179 TMX4Q9H1E5 349 aaPredicted RBP18.81■□□□□ 0.6
COMMD3-206ENST00000468179 ABCC12Q96J65 1359 aa18.81■□□□□ 0.6
COMMD3-206ENST00000468179 SH3TC1Q8TE82 1336 aa18.81■□□□□ 0.6
COMMD3-206ENST00000468179 C7orf43Q8WVR3 580 aa18.8■□□□□ 0.6
COMMD3-206ENST00000468179 CRAMP1Q96RY5 1269 aa18.8■□□□□ 0.6
COMMD3-206ENST00000468179 SALL2Q9Y467 1007 aaPredicted RBP18.8■□□□□ 0.6
COMMD3-206ENST00000468179 SENP3-EIF4A1A0A087X0R7 540 aa18.79■□□□□ 0.6
COMMD3-206ENST00000468179 TRIM28Q13263 835 aaKnown RBP18.79■□□□□ 0.6
COMMD3-206ENST00000468179 TWISTNBQ3B726 338 aaPredicted RBP18.79■□□□□ 0.6
COMMD3-206ENST00000468179 DPY19L2Q6NUT2 758 aa18.79■□□□□ 0.6
COMMD3-206ENST00000468179 COL11A2P13942 1736 aaPredicted RBP18.79■□□□□ 0.6
COMMD3-206ENST00000468179 HSP90B1P14625 803 aaKnown RBP18.78■□□□□ 0.6
COMMD3-206ENST00000468179 TSPYL6Q8N831 410 aa18.78■□□□□ 0.6
COMMD3-206ENST00000468179 ISCA1Q9BUE6 129 aa18.78■□□□□ 0.6
COMMD3-206ENST00000468179 MYH16Q9H6N6 1097 aa18.78■□□□□ 0.6
COMMD3-206ENST00000468179 FKBP4Q02790 459 aaKnown RBP eCLIP18.77■□□□□ 0.6
COMMD3-206ENST00000468179 C16orf71Q8IYS4 520 aaPredicted RBP18.77■□□□□ 0.6
COMMD3-206ENST00000468179 PHAXQ9H814 394 aaKnown RBP18.77■□□□□ 0.6
COMMD3-206ENST00000468179 FANCIQ9NVI1 1328 aa18.76■□□□□ 0.59
COMMD3-206ENST00000468179 GLTPD2A6NH11 291 aa18.75■□□□□ 0.59
COMMD3-206ENST00000468179 ATP5J2-PTCD1G3V325 749 aa18.75■□□□□ 0.59
COMMD3-206ENST00000468179 KIF3CO14782 793 aa18.75■□□□□ 0.59
COMMD3-206ENST00000468179 PPEF1O14829 653 aaPredicted RBP18.74■□□□□ 0.59
COMMD3-206ENST00000468179 BBOX1O75936 387 aa18.74■□□□□ 0.59
COMMD3-206ENST00000468179 HCLS1P14317 486 aaPredicted RBP18.74■□□□□ 0.59
COMMD3-206ENST00000468179 PRELPP51888 382 aa18.74■□□□□ 0.59
COMMD3-206ENST00000468179 DDX46Q7L014 1031 aaKnown RBP18.74■□□□□ 0.59
COMMD3-206ENST00000468179 SLX4Q8IY92 1834 aa18.74■□□□□ 0.59
COMMD3-206ENST00000468179 ARFGEF2Q9Y6D5 1785 aa18.74■□□□□ 0.59
COMMD3-206ENST00000468179 TOMM70O94826 608 aa18.74■□□□□ 0.59
COMMD3-206ENST00000468179 NEXNQ0ZGT2 675 aa18.74■□□□□ 0.59
COMMD3-206ENST00000468179 KSR2Q6VAB6 950 aa18.74■□□□□ 0.59
COMMD3-206ENST00000468179 CCDC191Q8NCU4 936 aa18.74■□□□□ 0.59
COMMD3-206ENST00000468179 METTL22Q9BUU2 404 aaPredicted RBP18.74■□□□□ 0.59
COMMD3-206ENST00000468179 NMRK2Q9NPI5 230 aa18.74■□□□□ 0.59
COMMD3-206ENST00000468179 CCER2I3L3R5 266 aa18.73■□□□□ 0.59
COMMD3-206ENST00000468179 ZBTB38Q8NAP3 1195 aaPredicted RBP18.73■□□□□ 0.59
COMMD3-206ENST00000468179 FAM89AQ96GI7 184 aa18.73■□□□□ 0.59
COMMD3-206ENST00000468179 PSMD1Q99460 953 aa18.73■□□□□ 0.59
COMMD3-206ENST00000468179 MYD88Q99836 296 aa18.73■□□□□ 0.59
COMMD3-206ENST00000468179 SBF1O95248 1867 aa18.72■□□□□ 0.59
COMMD3-206ENST00000468179 C3orf67Q6ZVT6 689 aa18.72■□□□□ 0.59
COMMD3-206ENST00000468179 TMC4Q7Z404 712 aa18.72■□□□□ 0.59
COMMD3-206ENST00000468179 SYNE4Q8N205 404 aa18.72■□□□□ 0.59
COMMD3-206ENST00000468179 RRAGCQ9HB90 399 aa18.72■□□□□ 0.59
COMMD3-206ENST00000468179 CWC25Q9NXE8 425 aaPredicted RBP18.72■□□□□ 0.59
COMMD3-206ENST00000468179 TNRC6CQ9HCJ0 1690 aaKnown RBP18.71■□□□□ 0.59
COMMD3-206ENST00000468179 ANKRD36CQ5JPF3 1778 aa18.71■□□□□ 0.59
COMMD3-206ENST00000468179 VEGFAP15692 232 aaPredicted RBP18.71■□□□□ 0.59
COMMD3-206ENST00000468179 EXOSC9Q06265 439 aaKnown RBP18.71■□□□□ 0.59
COMMD3-206ENST00000468179 ZNF277Q9NRM2 450 aaPredicted RBP18.71■□□□□ 0.59
COMMD3-206ENST00000468179 MAP3K2Q9Y2U5 619 aa18.71■□□□□ 0.59
COMMD3-206ENST00000468179 ATP6V0A2Q9Y487 856 aa18.71■□□□□ 0.59
COMMD3-206ENST00000468179 FER1L6Q2WGJ9 1857 aa18.7■□□□□ 0.58
COMMD3-206ENST00000468179 PI4KAP2A4QPH2 592 aa18.7■□□□□ 0.58
COMMD3-206ENST00000468179 IRS4O14654 1257 aaPredicted RBP18.7■□□□□ 0.58
COMMD3-206ENST00000468179 VAMP4O75379 141 aa18.7■□□□□ 0.58
COMMD3-206ENST00000468179 PCCAP05165 728 aaPredicted RBP18.7■□□□□ 0.58
COMMD3-206ENST00000468179 IARSP41252 1262 aaKnown RBP18.7■□□□□ 0.58
COMMD3-206ENST00000468179 GRAPQ13588 217 aa18.7■□□□□ 0.58
COMMD3-206ENST00000468179 SF3B3Q15393 1217 aaKnown RBP18.7■□□□□ 0.58
COMMD3-206ENST00000468179 PI4KAP1Q8N8J0 262 aa18.7■□□□□ 0.58
COMMD3-206ENST00000468179 SUPT20HQ8NEM7 779 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms