RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 AFDNP55196 1824 aaKnown RBP19.23■□□□□ 0.67
SNIP1-202ENST00000468040 POLRMTO00411 1230 aaKnown RBP19.23■□□□□ 0.67
SNIP1-202ENST00000468040 DDR1Q08345 913 aa19.23■□□□□ 0.67
SNIP1-202ENST00000468040 ATF5Q9Y2D1 282 aaPredicted RBP19.23■□□□□ 0.67
SNIP1-202ENST00000468040 SUPT16HQ9Y5B9 1047 aaKnown RBP19.23■□□□□ 0.67
SNIP1-202ENST00000468040 GCKRQ14397 625 aa19.22■□□□□ 0.67
SNIP1-202ENST00000468040 SUSD4Q5VX71 490 aa19.22■□□□□ 0.67
SNIP1-202ENST00000468040 TPTE2Q6XPS3 522 aa19.22■□□□□ 0.67
SNIP1-202ENST00000468040 NBPF5PQ86XG9 351 aaPredicted RBP19.22■□□□□ 0.67
SNIP1-202ENST00000468040 UTP14AQ9BVJ6 771 aaKnown RBP19.22■□□□□ 0.67
SNIP1-202ENST00000468040 SPON1Q9HCB6 807 aa19.22■□□□□ 0.67
SNIP1-202ENST00000468040 TNNQ9UQP3 1299 aa19.22■□□□□ 0.67
SNIP1-202ENST00000468040 NPHP1O15259 732 aa19.21■□□□□ 0.67
SNIP1-202ENST00000468040 SERPINB2P05120 415 aa19.21■□□□□ 0.67
SNIP1-202ENST00000468040 TMEM57Q8N5G2 664 aa19.21■□□□□ 0.67
SNIP1-202ENST00000468040 NTSR2O95665 410 aa19.2■□□□□ 0.66
SNIP1-202ENST00000468040 RLBP1P12271 317 aa19.2■□□□□ 0.66
SNIP1-202ENST00000468040 CNBD1Q8NA66 436 aa19.2■□□□□ 0.66
SNIP1-202ENST00000468040 ZBTB38Q8NAP3 1195 aaPredicted RBP19.2■□□□□ 0.66
SNIP1-202ENST00000468040 PANK1Q8TE04 598 aa19.2■□□□□ 0.66
SNIP1-202ENST00000468040 TRMT112Q9UI30 125 aaKnown RBP19.2■□□□□ 0.66
SNIP1-202ENST00000468040 NRXN2Q9P2S2 1712 aa19.2■□□□□ 0.66
SNIP1-202ENST00000468040 FAM177BA6PVY3 158 aa19.19■□□□□ 0.66
SNIP1-202ENST00000468040 GTF2E1P29083 439 aaPredicted RBP19.19■□□□□ 0.66
SNIP1-202ENST00000468040 ITPRIPQ8IWB1 547 aa19.19■□□□□ 0.66
SNIP1-202ENST00000468040 SGIP1Q9BQI5 828 aa19.19■□□□□ 0.66
SNIP1-202ENST00000468040 SH3TC1Q8TE82 1336 aa19.19■□□□□ 0.66
SNIP1-202ENST00000468040 GRM8O00222 908 aa19.18■□□□□ 0.66
SNIP1-202ENST00000468040 PCCAP05165 728 aaPredicted RBP19.18■□□□□ 0.66
SNIP1-202ENST00000468040 HSP90B1P14625 803 aaKnown RBP19.18■□□□□ 0.66
SNIP1-202ENST00000468040 PTGER2P43116 358 aa19.18■□□□□ 0.66
SNIP1-202ENST00000468040 ST5P78524 1137 aa19.18■□□□□ 0.66
SNIP1-202ENST00000468040 C9orf78Q9NZ63 289 aaPredicted RBP19.18■□□□□ 0.66
SNIP1-202ENST00000468040 MVPQ14764 893 aaKnown RBP19.17■□□□□ 0.66
SNIP1-202ENST00000468040 PRR5LQ6MZQ0 368 aa19.17■□□□□ 0.66
SNIP1-202ENST00000468040 H7C1W4 665 aa19.16■□□□□ 0.66
SNIP1-202ENST00000468040 C20orf194Q5TEA3 1177 aa19.16■□□□□ 0.66
SNIP1-202ENST00000468040 UBE3BQ7Z3V4 1068 aa19.16■□□□□ 0.66
SNIP1-202ENST00000468040 NUTM1Q86Y26 1132 aa19.16■□□□□ 0.66
SNIP1-202ENST00000468040 FAM89AQ96GI7 184 aa19.16■□□□□ 0.66
SNIP1-202ENST00000468040 UTYO14607 1347 aa19.16■□□□□ 0.66
SNIP1-202ENST00000468040 ERFEQ4G0M1 354 aa19.15■□□□□ 0.66
SNIP1-202ENST00000468040 USP44Q9H0E7 712 aa19.15■□□□□ 0.66
SNIP1-202ENST00000468040 CHMP4BQ9H444 224 aaKnown RBP19.15■□□□□ 0.66
SNIP1-202ENST00000468040 DDX19BQ9UMR2 479 aa19.15■□□□□ 0.66
SNIP1-202ENST00000468040 HDAC5Q9UQL6 1122 aa19.15■□□□□ 0.66
SNIP1-202ENST00000468040 COG6Q9Y2V7 657 aa19.15■□□□□ 0.66
SNIP1-202ENST00000468040 CDHR2Q9BYE9 1310 aa19.15■□□□□ 0.66
SNIP1-202ENST00000468040 RIC1Q4ADV7 1423 aa19.15■□□□□ 0.66
SNIP1-202ENST00000468040 GNAI3P08754 354 aa19.14■□□□□ 0.65
SNIP1-202ENST00000468040 SLC10A5Q5PT55 438 aa19.14■□□□□ 0.65
SNIP1-202ENST00000468040 IRS4O14654 1257 aaPredicted RBP19.13■□□□□ 0.65
SNIP1-202ENST00000468040 NBPF7P0C2Y1 421 aaPredicted RBP19.13■□□□□ 0.65
SNIP1-202ENST00000468040 UBTFL1P0CB47 393 aaPredicted RBP19.13■□□□□ 0.65
SNIP1-202ENST00000468040 CASP7P55210 303 aa19.13■□□□□ 0.65
SNIP1-202ENST00000468040 RTL5Q5HYW3 569 aaPredicted RBP19.13■□□□□ 0.65
SNIP1-202ENST00000468040 BRIP1Q9BX63 1249 aa19.13■□□□□ 0.65
SNIP1-202ENST00000468040 ABCC12Q96J65 1359 aa19.13■□□□□ 0.65
SNIP1-202ENST00000468040 C10orf71Q711Q0 1435 aa19.13■□□□□ 0.65
SNIP1-202ENST00000468040 LAMB2P55268 1798 aa19.12■□□□□ 0.65
SNIP1-202ENST00000468040 MEIS3Q99687 375 aa19.12■□□□□ 0.65
SNIP1-202ENST00000468040 ZBTB7BO15156 539 aaPredicted RBP19.11■□□□□ 0.65
SNIP1-202ENST00000468040 SYNE4Q8N205 404 aa19.11■□□□□ 0.65
SNIP1-202ENST00000468040 JARID2Q92833 1246 aaPredicted RBP19.11■□□□□ 0.65
SNIP1-202ENST00000468040 PDE8AO60658 829 aa19.1■□□□□ 0.65
SNIP1-202ENST00000468040 HCLS1P14317 486 aaPredicted RBP19.1■□□□□ 0.65
SNIP1-202ENST00000468040 PDE6BP35913 854 aa19.1■□□□□ 0.65
SNIP1-202ENST00000468040 CCDC24Q8N4L8 307 aa19.1■□□□□ 0.65
SNIP1-202ENST00000468040 NLRP3Q96P20 1036 aa19.1■□□□□ 0.65
SNIP1-202ENST00000468040 PLA2G12BQ9BX93 195 aa19.1■□□□□ 0.65
SNIP1-202ENST00000468040 PDZRN3Q9UPQ7 1066 aa19.1■□□□□ 0.65
SNIP1-202ENST00000468040 DDX60Q8IY21 1712 aaKnown RBP19.1■□□□□ 0.65
SNIP1-202ENST00000468040 LRP5O75197 1615 aa19.1■□□□□ 0.65
SNIP1-202ENST00000468040 PPP1R1BQ9UD71 204 aaPredicted RBP19.09■□□□□ 0.65
SNIP1-202ENST00000468040 CD2APQ9Y5K6 639 aa19.09■□□□□ 0.65
SNIP1-202ENST00000468040 KIF13BQ9NQT8 1826 aa19.09■□□□□ 0.65
SNIP1-202ENST00000468040 GNAI2P04899 355 aa19.08■□□□□ 0.64
SNIP1-202ENST00000468040 CRBNQ96SW2 442 aa19.08■□□□□ 0.64
SNIP1-202ENST00000468040 TNRC6CQ9HCJ0 1690 aaKnown RBP19.08■□□□□ 0.64
SNIP1-202ENST00000468040 ANKRD31Q8N7Z5 1873 aa19.07■□□□□ 0.64
SNIP1-202ENST00000468040 KLRG2A4D1S0 409 aaPredicted RBP19.07■□□□□ 0.64
SNIP1-202ENST00000468040 CTSWP56202 376 aa19.07■□□□□ 0.64
SNIP1-202ENST00000468040 SUCLG2Q96I99 432 aa19.07■□□□□ 0.64
SNIP1-202ENST00000468040 TGFB2P61812 414 aa19.06■□□□□ 0.64
SNIP1-202ENST00000468040 SF3B3Q15393 1217 aaKnown RBP19.06■□□□□ 0.64
SNIP1-202ENST00000468040 CRY2Q49AN0 593 aa19.06■□□□□ 0.64
SNIP1-202ENST00000468040 ZBTB40Q9NUA8 1239 aa19.06■□□□□ 0.64
SNIP1-202ENST00000468040 LRRFIP2Q9Y608 721 aaKnown RBP19.06■□□□□ 0.64
SNIP1-202ENST00000468040 MYH3P11055 1940 aa19.06■□□□□ 0.64
SNIP1-202ENST00000468040 FOXO4P98177 505 aa19.05■□□□□ 0.64
SNIP1-202ENST00000468040 AAMPQ13685 434 aa19.05■□□□□ 0.64
SNIP1-202ENST00000468040 CCDC152Q4G0S7 254 aa19.05■□□□□ 0.64
SNIP1-202ENST00000468040 KLHL34Q8N239 644 aa19.05■□□□□ 0.64
SNIP1-202ENST00000468040 KAZALD1Q96I82 304 aa19.05■□□□□ 0.64
SNIP1-202ENST00000468040 H0YIN7 160 aa19.04■□□□□ 0.64
SNIP1-202ENST00000468040 NEFLP07196 543 aa19.04■□□□□ 0.64
SNIP1-202ENST00000468040 RABL6Q3YEC7 729 aaPredicted RBP19.04■□□□□ 0.64
SNIP1-202ENST00000468040 C3orf67Q6ZVT6 689 aa19.04■□□□□ 0.64
SNIP1-202ENST00000468040 C2CD5Q86YS7 1000 aa19.04■□□□□ 0.64
SNIP1-202ENST00000468040 TTLL11Q8NHH1 800 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms