RNA–Protein interactions for RNA: ENST00000468027.5

PTMA-211, Transcript of prothymosin alpha, humanhuman

TSL 1 (best)

Gene PTMA, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-211ENST00000468027 TTLL6Q8N841 843 aa16.79■□□□□ 0.28
PTMA-211ENST00000468027 ZNF784Q8NCA9 323 aaPredicted RBP16.79■□□□□ 0.28
PTMA-211ENST00000468027 SNED1Q8TER0 1413 aa16.79■□□□□ 0.28
PTMA-211ENST00000468027 PRELPP51888 382 aa16.78■□□□□ 0.28
PTMA-211ENST00000468027 EXOSC9Q06265 439 aaKnown RBP16.78■□□□□ 0.28
PTMA-211ENST00000468027 CCDC30Q5VVM6 783 aa16.78■□□□□ 0.28
PTMA-211ENST00000468027 MIER1Q8N108 512 aa16.78■□□□□ 0.28
PTMA-211ENST00000468027 MASTLQ96GX5 879 aa16.78■□□□□ 0.28
PTMA-211ENST00000468027 TRIM28Q13263 835 aaKnown RBP16.77■□□□□ 0.28
PTMA-211ENST00000468027 HSP90AB3PQ58FF7 597 aa16.77■□□□□ 0.28
PTMA-211ENST00000468027 C3orf67Q6ZVT6 689 aa16.77■□□□□ 0.28
PTMA-211ENST00000468027 C7orf43Q8WVR3 580 aa16.77■□□□□ 0.28
PTMA-211ENST00000468027 COL4A1P02462 1669 aa16.77■□□□□ 0.28
PTMA-211ENST00000468027 LRRC37AA6NMS7 1700 aa16.76■□□□□ 0.27
PTMA-211ENST00000468027 RNF123Q5XPI4 1314 aa16.76■□□□□ 0.27
PTMA-211ENST00000468027 G2E3Q7L622 706 aa16.76■□□□□ 0.27
PTMA-211ENST00000468027 PPP1R42Q7Z4L9 355 aa16.76■□□□□ 0.27
PTMA-211ENST00000468027 SYNE4Q8N205 404 aa16.76■□□□□ 0.27
PTMA-211ENST00000468027 NPR1P16066 1061 aa16.75■□□□□ 0.27
PTMA-211ENST00000468027 GOLGA2Q08379 1002 aa16.75■□□□□ 0.27
PTMA-211ENST00000468027 ARHGAP27Q6ZUM4 889 aa16.75■□□□□ 0.27
PTMA-211ENST00000468027 ZNF622Q969S3 477 aaKnown RBP eCLIP16.75■□□□□ 0.275e-24■■■■□ 25.3
PTMA-211ENST00000468027 UTP14AQ9BVJ6 771 aaKnown RBP16.75■□□□□ 0.27
PTMA-211ENST00000468027 CHMP4AQ9BY43 222 aa16.75■□□□□ 0.27
PTMA-211ENST00000468027 NFKBIEO00221 500 aa16.74■□□□□ 0.27
PTMA-211ENST00000468027 HOXA10P31260 410 aaPredicted RBP16.74■□□□□ 0.27
PTMA-211ENST00000468027 PRPF40BQ6NWY9 871 aaKnown RBP16.74■□□□□ 0.27
PTMA-211ENST00000468027 TRMT2AQ8IZ69 625 aaKnown RBP16.74■□□□□ 0.27
PTMA-211ENST00000468027 CNKSR1Q969H4 720 aa16.74■□□□□ 0.27
PTMA-211ENST00000468027 TCERG1O14776 1098 aaKnown RBP16.73■□□□□ 0.27
PTMA-211ENST00000468027 NPHP1O15259 732 aa16.73■□□□□ 0.27
PTMA-211ENST00000468027 ATP5J2-PTCD1G3V325 749 aa16.72■□□□□ 0.27
PTMA-211ENST00000468027 C21orf2O43822 256 aa16.72■□□□□ 0.27
PTMA-211ENST00000468027 RASSF7Q02833 373 aa16.72■□□□□ 0.27
PTMA-211ENST00000468027 SLFN5Q08AF3 891 aa16.72■□□□□ 0.27
PTMA-211ENST00000468027 MYH16Q9H6N6 1097 aa16.72■□□□□ 0.27
PTMA-211ENST00000468027 LTBP1Q14766 1721 aa16.72■□□□□ 0.27
PTMA-211ENST00000468027 SPEF2Q9C093 1822 aa16.72■□□□□ 0.27
PTMA-211ENST00000468027 SLC4A2P04920 1241 aa16.71■□□□□ 0.27
PTMA-211ENST00000468027 GTF2E1P29083 439 aaPredicted RBP16.71■□□□□ 0.27
PTMA-211ENST00000468027 KSR2Q6VAB6 950 aa16.71■□□□□ 0.27
PTMA-211ENST00000468027 RIC3Q7Z5B4 369 aa16.71■□□□□ 0.27
PTMA-211ENST00000468027 METTL22Q9BUU2 404 aaPredicted RBP16.71■□□□□ 0.27
PTMA-211ENST00000468027 LTBP3Q9NS15 1303 aa16.7■□□□□ 0.26
PTMA-211ENST00000468027 PI4KAP2A4QPH2 592 aa16.7■□□□□ 0.26
PTMA-211ENST00000468027 IGKV5-2P06315 115 aa16.7■□□□□ 0.26
PTMA-211ENST00000468027 PI4KAP1Q8N8J0 262 aa16.7■□□□□ 0.26
PTMA-211ENST00000468027 CDCA7LQ96GN5 454 aa16.7■□□□□ 0.26
PTMA-211ENST00000468027 STK31Q9BXU1 1019 aa16.7■□□□□ 0.26
PTMA-211ENST00000468027 TRMT112Q9UI30 125 aaKnown RBP16.7■□□□□ 0.26
PTMA-211ENST00000468027 SH3TC1Q8TE82 1336 aa16.7■□□□□ 0.26
PTMA-211ENST00000468027 CEP350Q5VT06 3117 aa16.69■□□□□ 0.26
PTMA-211ENST00000468027 HCLS1P14317 486 aaPredicted RBP16.69■□□□□ 0.26
PTMA-211ENST00000468027 ALDH1B1P30837 517 aa16.69■□□□□ 0.26
PTMA-211ENST00000468027 C9orf131Q5VYM1 1079 aa16.69■□□□□ 0.26
PTMA-211ENST00000468027 OLFM4Q6UX06 510 aa16.69■□□□□ 0.26
PTMA-211ENST00000468027 SLC51AQ86UW1 340 aa16.69■□□□□ 0.26
PTMA-211ENST00000468027 ZNF428Q96B54 188 aa16.69■□□□□ 0.26
PTMA-211ENST00000468027 CRAMP1Q96RY5 1269 aa16.69■□□□□ 0.26
PTMA-211ENST00000468027 MYD88Q99836 296 aa16.69■□□□□ 0.26
PTMA-211ENST00000468027 MAP3K2Q9Y2U5 619 aa16.69■□□□□ 0.26
PTMA-211ENST00000468027 E9PSI1 815 aa16.68■□□□□ 0.26
PTMA-211ENST00000468027 DDX58O95786 925 aaKnown RBP16.68■□□□□ 0.26
PTMA-211ENST00000468027 FLIIQ13045 1269 aa16.68■□□□□ 0.26
PTMA-211ENST00000468027 CCDC191Q8NCU4 936 aa16.68■□□□□ 0.26
PTMA-211ENST00000468027 FAM89AQ96GI7 184 aa16.68■□□□□ 0.26
PTMA-211ENST00000468027 NLRP3Q96P20 1036 aa16.68■□□□□ 0.26
PTMA-211ENST00000468027 A0A1B0GUL6 1792 aa16.67■□□□□ 0.26
PTMA-211ENST00000468027 COL4A5P29400 1685 aa16.67■□□□□ 0.26
PTMA-211ENST00000468027 ZBTB38Q8NAP3 1195 aaPredicted RBP16.67■□□□□ 0.26
PTMA-211ENST00000468027 ZNF219Q9P2Y4 722 aaPredicted RBP16.67■□□□□ 0.26
PTMA-211ENST00000468027 WDR90Q96KV7 1748 aa16.67■□□□□ 0.26
PTMA-211ENST00000468027 LMNB1P20700 586 aa16.66■□□□□ 0.26
PTMA-211ENST00000468027 SF3B3Q15393 1217 aaKnown RBP16.66■□□□□ 0.26
PTMA-211ENST00000468027 DUOX1Q9NRD9 1551 aa16.66■□□□□ 0.26
PTMA-211ENST00000468027 ABCC4O15439 1325 aa16.66■□□□□ 0.26
PTMA-211ENST00000468027 PCCAP05165 728 aaPredicted RBP16.65■□□□□ 0.26
PTMA-211ENST00000468027 SOGA3Q5TF21 947 aa16.65■□□□□ 0.26
PTMA-211ENST00000468027 RBM17Q96I25 401 aaKnown RBP16.65■□□□□ 0.26
PTMA-211ENST00000468027 RNF181Q9P0P0 153 aa16.65■□□□□ 0.26
PTMA-211ENST00000468027 ZC3H4Q9UPT8 1303 aaKnown RBP16.65■□□□□ 0.26
PTMA-211ENST00000468027 NEURL1BA8MQ27 555 aa16.64■□□□□ 0.25
PTMA-211ENST00000468027 CCDC93Q567U6 631 aa16.64■□□□□ 0.25
PTMA-211ENST00000468027 RPGRQ92834 1020 aaKnown RBP16.64■□□□□ 0.25
PTMA-211ENST00000468027 CWC25Q9NXE8 425 aaPredicted RBP16.64■□□□□ 0.25
PTMA-211ENST00000468027 CDHR2Q9BYE9 1310 aa16.64■□□□□ 0.25
PTMA-211ENST00000468027 IRS4O14654 1257 aaPredicted RBP16.63■□□□□ 0.25
PTMA-211ENST00000468027 CASP7P55210 303 aa16.63■□□□□ 0.25
PTMA-211ENST00000468027 CWF19L2Q2TBE0 894 aaKnown RBP16.63■□□□□ 0.25
PTMA-211ENST00000468027 TAOK3Q9H2K8 898 aa16.63■□□□□ 0.25
PTMA-211ENST00000468027 SCN4AP35499 1836 aa16.63■□□□□ 0.25
PTMA-211ENST00000468027 FKBP4Q02790 459 aaKnown RBP eCLIP16.62■□□□□ 0.256e-9■■■■■ 44.9
PTMA-211ENST00000468027 FKBP5Q13451 457 aaPredicted RBP16.62■□□□□ 0.25
PTMA-211ENST00000468027 RTL5Q5HYW3 569 aaPredicted RBP16.62■□□□□ 0.25
PTMA-211ENST00000468027 MRPL50Q8N5N7 158 aaKnown RBP16.62■□□□□ 0.25
PTMA-211ENST00000468027 DNAAF4Q8WXU2 420 aa16.62■□□□□ 0.25
PTMA-211ENST00000468027 PSMD1Q99460 953 aa16.62■□□□□ 0.25
PTMA-211ENST00000468027 PSME4Q14997 1843 aa16.61■□□□□ 0.25
PTMA-211ENST00000468027 H7C1W4 665 aa16.61■□□□□ 0.25
PTMA-211ENST00000468027 PPEF1O14829 653 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms