RNA–Protein interactions for RNA: ENST00000467749.1

C4A-248, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-248ENST00000467749 PRPF38BQ5VTL8 546 aaKnown RBP10.68□□□□□ -0.7
C4A-248ENST00000467749 CIAPIN1Q6FI81 312 aa10.68□□□□□ -0.7
C4A-248ENST00000467749 NIP7Q9Y221 180 aaKnown RBP eCLIP10.68□□□□□ -0.7
C4A-248ENST00000467749 AKAP11Q9UKA4 1901 aa10.68□□□□□ -0.7
C4A-248ENST00000467749 GNAT3A8MTJ3 354 aa10.67□□□□□ -0.7
C4A-248ENST00000467749 NOGQ13253 232 aa10.67□□□□□ -0.7
C4A-248ENST00000467749 LARGE2Q8N3Y3 721 aa10.67□□□□□ -0.7
C4A-248ENST00000467749 IL17REQ8NFR9 667 aa10.67□□□□□ -0.7
C4A-248ENST00000467749 ADARB2Q9NS39 739 aaKnown RBP10.67□□□□□ -0.7
C4A-248ENST00000467749 NUP98P52948 1817 aa10.67□□□□□ -0.7
C4A-248ENST00000467749 SOX10P56693 466 aa10.66□□□□□ -0.7
C4A-248ENST00000467749 CRY2Q49AN0 593 aa10.66□□□□□ -0.7
C4A-248ENST00000467749 GPRC5DQ9NZD1 345 aa10.66□□□□□ -0.7
C4A-248ENST00000467749 KNSTRNQ9Y448 316 aa10.66□□□□□ -0.7
C4A-248ENST00000467749 USP16Q9Y5T5 823 aa10.66□□□□□ -0.7
C4A-248ENST00000467749 CEMIPQ8WUJ3 1361 aa10.65□□□□□ -0.7
C4A-248ENST00000467749 FAM177BA6PVY3 158 aa10.65□□□□□ -0.7
C4A-248ENST00000467749 DIAPH1O60610 1272 aaKnown RBP10.65□□□□□ -0.7
C4A-248ENST00000467749 GTF2E1P29083 439 aaPredicted RBP10.65□□□□□ -0.7
C4A-248ENST00000467749 PIP4K2AP48426 406 aaPredicted RBP10.65□□□□□ -0.7
C4A-248ENST00000467749 NIM1KQ8IY84 436 aa10.65□□□□□ -0.7
C4A-248ENST00000467749 GAS2L2Q8NHY3 880 aa10.65□□□□□ -0.7
C4A-248ENST00000467749 GLIS2Q9BZE0 524 aaPredicted RBP10.65□□□□□ -0.7
C4A-248ENST00000467749 LAMB4A4D0S4 1761 aa10.65□□□□□ -0.71
C4A-248ENST00000467749 BTBD11A6QL63 1104 aa10.64□□□□□ -0.71
C4A-248ENST00000467749 RPGRQ92834 1020 aaKnown RBP10.64□□□□□ -0.71
C4A-248ENST00000467749 NYXQ9GZU5 481 aa10.64□□□□□ -0.71
C4A-248ENST00000467749 ZNF408Q9H9D4 720 aa10.64□□□□□ -0.71
C4A-248ENST00000467749 SAGE1Q9NXZ1 904 aa10.64□□□□□ -0.71
C4A-248ENST00000467749 PGAP2Q9UHJ9 254 aa10.64□□□□□ -0.71
C4A-248ENST00000467749 RIC1Q4ADV7 1423 aa10.64□□□□□ -0.71
C4A-248ENST00000467749 ABCC12Q96J65 1359 aa10.64□□□□□ -0.71
C4A-248ENST00000467749 CDHR2Q9BYE9 1310 aa10.63□□□□□ -0.71
C4A-248ENST00000467749 KCNQ3O43525 872 aa10.63□□□□□ -0.71
C4A-248ENST00000467749 HOXA10P31260 410 aaPredicted RBP10.63□□□□□ -0.71
C4A-248ENST00000467749 CDC37L1Q7L3B6 337 aa10.63□□□□□ -0.71
C4A-248ENST00000467749 ZC3H15Q8WU90 426 aaKnown RBP10.63□□□□□ -0.71
C4A-248ENST00000467749 VPS33BQ9H267 617 aa10.63□□□□□ -0.71
C4A-248ENST00000467749 NPC1L1Q9UHC9 1359 aa10.63□□□□□ -0.71
C4A-248ENST00000467749 PRAMEF22A3QJZ6 481 aa10.62□□□□□ -0.71
C4A-248ENST00000467749 PPIP5K2O43314 1243 aa10.62□□□□□ -0.71
C4A-248ENST00000467749 SNRPA1P09661 255 aaKnown RBP10.62□□□□□ -0.71
C4A-248ENST00000467749 AMER1Q5JTC6 1135 aaPredicted RBP10.62□□□□□ -0.71
C4A-248ENST00000467749 ZIC5Q96T25 663 aa10.62□□□□□ -0.71
C4A-248ENST00000467749 POLR2AP24928 1970 aaKnown RBP10.61□□□□□ -0.71
C4A-248ENST00000467749 NBPF26B4DH59 902 aa10.61□□□□□ -0.71
C4A-248ENST00000467749 PPEF1O14829 653 aaPredicted RBP10.61□□□□□ -0.71
C4A-248ENST00000467749 GMPSP49915 693 aaPredicted RBP10.61□□□□□ -0.71
C4A-248ENST00000467749 HUNKP57058 714 aa10.61□□□□□ -0.71
C4A-248ENST00000467749 CXCL9Q07325 125 aa10.61□□□□□ -0.71
C4A-248ENST00000467749 HLFQ16534 295 aa10.61□□□□□ -0.71
C4A-248ENST00000467749 CC2D1BQ5T0F9 858 aaKnown RBP10.61□□□□□ -0.71
C4A-248ENST00000467749 NBPF10Q6P3W6 841 aaKnown RBP10.61□□□□□ -0.71
C4A-248ENST00000467749 NUTM1Q86Y26 1132 aa10.61□□□□□ -0.71
C4A-248ENST00000467749 NBPF15Q8N660 670 aa10.61□□□□□ -0.71
C4A-248ENST00000467749 RBM17Q96I25 401 aaKnown RBP10.61□□□□□ -0.71
C4A-248ENST00000467749 CRAMP1Q96RY5 1269 aa10.61□□□□□ -0.71
C4A-248ENST00000467749 ZNRF3Q9ULT6 936 aa10.61□□□□□ -0.71
C4A-248ENST00000467749 IBTKQ9P2D0 1353 aaPredicted RBP10.61□□□□□ -0.71
C4A-248ENST00000467749 COL3A1P02461 1466 aaPredicted RBP10.61□□□□□ -0.71
C4A-248ENST00000467749 AOC3Q16853 763 aa10.6□□□□□ -0.71
C4A-248ENST00000467749 RGMBQ6NW40 437 aa10.6□□□□□ -0.71
C4A-248ENST00000467749 SUPT20HQ8NEM7 779 aa10.6□□□□□ -0.71
C4A-248ENST00000467749 TMX4Q9H1E5 349 aaPredicted RBP10.6□□□□□ -0.71
C4A-248ENST00000467749 FAM155AB1AL88 458 aaPredicted RBP10.59□□□□□ -0.71
C4A-248ENST00000467749 PER1O15534 1290 aaPredicted RBP10.59□□□□□ -0.71
C4A-248ENST00000467749 TRPA1O75762 1119 aa10.59□□□□□ -0.71
C4A-248ENST00000467749 HIRAP54198 1017 aaPredicted RBP10.59□□□□□ -0.71
C4A-248ENST00000467749 CTU1Q7Z7A3 348 aaKnown RBP10.59□□□□□ -0.71
C4A-248ENST00000467749 CCDC102AQ96A19 550 aa10.59□□□□□ -0.71
C4A-248ENST00000467749 GCC1Q96CN9 775 aa10.59□□□□□ -0.71
C4A-248ENST00000467749 BCL2L13Q9BXK5 485 aa10.59□□□□□ -0.71
C4A-248ENST00000467749 LAMB2P55268 1798 aa10.58□□□□□ -0.72
C4A-248ENST00000467749 ANKRD36CQ5JPF3 1778 aa10.58□□□□□ -0.72
C4A-248ENST00000467749 ERVV-1B6SEH8 477 aa10.58□□□□□ -0.72
C4A-248ENST00000467749 TCERG1O14776 1098 aaKnown RBP10.58□□□□□ -0.72
C4A-248ENST00000467749 U2SURPO15042 1029 aaKnown RBP10.58□□□□□ -0.72
C4A-248ENST00000467749 KIF23Q02241 960 aaPredicted RBP10.58□□□□□ -0.72
C4A-248ENST00000467749 TNIP1Q15025 636 aa10.58□□□□□ -0.72
C4A-248ENST00000467749 SLC51AQ86UW1 340 aa10.58□□□□□ -0.72
C4A-248ENST00000467749 TRPM4Q8TD43 1214 aa10.58□□□□□ -0.72
C4A-248ENST00000467749 RTFDC1Q9BY42 306 aaPredicted RBP10.58□□□□□ -0.72
C4A-248ENST00000467749 RNF186Q9NXI6 227 aa10.58□□□□□ -0.72
C4A-248ENST00000467749 ATP6V0A2Q9Y487 856 aa10.58□□□□□ -0.72
C4A-248ENST00000467749 USP48Q86UV5 1035 aa10.57□□□□□ -0.72
C4A-248ENST00000467749 C2orf69Q8N8R5 385 aa10.57□□□□□ -0.72
C4A-248ENST00000467749 GBA2Q9HCG7 927 aaPredicted RBP10.57□□□□□ -0.72
C4A-248ENST00000467749 MAP3K15Q6ZN16 1313 aa10.57□□□□□ -0.72
C4A-248ENST00000467749 H7C1D1 291 aa10.56□□□□□ -0.72
C4A-248ENST00000467749 RAD17O75943 681 aa10.56□□□□□ -0.72
C4A-248ENST00000467749 ZNF157P51786 506 aaPredicted RBP10.56□□□□□ -0.72
C4A-248ENST00000467749 KIAA2012Q0VF49 1180 aa10.56□□□□□ -0.72
C4A-248ENST00000467749 PKN2Q16513 984 aaKnown RBP10.56□□□□□ -0.72
C4A-248ENST00000467749 CNOT7Q9UIV1 285 aaKnown RBP10.56□□□□□ -0.72
C4A-248ENST00000467749 HPS5Q9UPZ3 1129 aa10.56□□□□□ -0.72
C4A-248ENST00000467749 UBN2Q6ZU65 1347 aa10.56□□□□□ -0.72
C4A-248ENST00000467749 DDX60Q8IY21 1712 aaKnown RBP10.55□□□□□ -0.72
C4A-248ENST00000467749 KDM3BQ7LBC6 1761 aa10.55□□□□□ -0.72
C4A-248ENST00000467749 SLC10A3P09131 477 aa10.55□□□□□ -0.72
C4A-248ENST00000467749 GPTP24298 496 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms