RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, human

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD4-205	ENST00000467574	DDX60	Q8IY21	1712 aa	Known RBP	33.33	■■■□□ 2.93
PDCD4-205	ENST00000467574		H0YIN7	160 aa		33.33	■■■□□ 2.93
PDCD4-205	ENST00000467574	PPP1R42	Q7Z4L9	355 aa		33.33	■■■□□ 2.93
PDCD4-205	ENST00000467574	DDX58	O95786	925 aa	Known RBP	33.32	■■■□□ 2.92
PDCD4-205	ENST00000467574	FLII	Q13045	1269 aa		33.32	■■■□□ 2.92
PDCD4-205	ENST00000467574	UTP14A	Q9BVJ6	771 aa	Known RBP	33.32	■■■□□ 2.92
PDCD4-205	ENST00000467574	BCS1L	Q9Y276	419 aa		33.32	■■■□□ 2.92
PDCD4-205	ENST00000467574	ATP5J2-PTCD1	G3V325	749 aa		33.31	■■■□□ 2.92
PDCD4-205	ENST00000467574	GRIN3B	O60391	1043 aa		33.31	■■■□□ 2.92
PDCD4-205	ENST00000467574	RNF123	Q5XPI4	1314 aa		33.3	■■■□□ 2.92
PDCD4-205	ENST00000467574	SLX4	Q8IY92	1834 aa		33.3	■■■□□ 2.92
PDCD4-205	ENST00000467574	SRGN	P10124	158 aa		33.3	■■■□□ 2.92
PDCD4-205	ENST00000467574	GTF2E1	P29083	439 aa	Predicted RBP	33.3	■■■□□ 2.92
PDCD4-205	ENST00000467574	TRIM28	Q13263	835 aa	Known RBP	33.3	■■■□□ 2.92
PDCD4-205	ENST00000467574	DALRD3	Q5D0E6	543 aa	Known RBP	33.3	■■■□□ 2.92
PDCD4-205	ENST00000467574	KSR2	Q6VAB6	950 aa		33.3	■■■□□ 2.92
PDCD4-205	ENST00000467574	MAP3K2	Q9Y2U5	619 aa		33.3	■■■□□ 2.92
PDCD4-205	ENST00000467574	PI4KAP2	A4QPH2	592 aa		33.29	■■■□□ 2.92
PDCD4-205	ENST00000467574	PI4KAP1	Q8N8J0	262 aa		33.29	■■■□□ 2.92
PDCD4-205	ENST00000467574	METTL22	Q9BUU2	404 aa	Predicted RBP	33.29	■■■□□ 2.92
PDCD4-205	ENST00000467574	MYD88	Q99836	296 aa		33.27	■■■□□ 2.92
PDCD4-205	ENST00000467574	CRY2	Q49AN0	593 aa		33.26	■■■□□ 2.91
PDCD4-205	ENST00000467574	SYNE4	Q8N205	404 aa		33.26	■■■□□ 2.91
PDCD4-205	ENST00000467574	ZNF428	Q96B54	188 aa		33.26	■■■□□ 2.91
PDCD4-205	ENST00000467574	SLC10A5	Q5PT55	438 aa		33.25	■■■□□ 2.91
PDCD4-205	ENST00000467574	STYK1	Q6J9G0	422 aa		33.25	■■■□□ 2.91
PDCD4-205	ENST00000467574	C3orf67	Q6ZVT6	689 aa		33.25	■■■□□ 2.91
PDCD4-205	ENST00000467574	TTLL6	Q8N841	843 aa		33.25	■■■□□ 2.91
PDCD4-205	ENST00000467574	TRMT112	Q9UI30	125 aa	Known RBP	33.25	■■■□□ 2.91
PDCD4-205	ENST00000467574	ZNF622	Q969S3	477 aa	Known RBP eCLIP	33.24	■■■□□ 2.91
PDCD4-205	ENST00000467574	MASTL	Q96GX5	879 aa		33.24	■■■□□ 2.91
PDCD4-205	ENST00000467574	ZBED9	Q6R2W3	1325 aa		33.24	■■■□□ 2.91
PDCD4-205	ENST00000467574	SH3TC1	Q8TE82	1336 aa		33.24	■■■□□ 2.91
PDCD4-205	ENST00000467574	FKBP5	Q13451	457 aa	Predicted RBP	33.23	■■■□□ 2.91
PDCD4-205	ENST00000467574	IGKV5-2	P06315	115 aa		33.22	■■■□□ 2.91
PDCD4-205	ENST00000467574	NPR1	P16066	1061 aa		33.22	■■■□□ 2.91
PDCD4-205	ENST00000467574	SSH1	Q8WYL5	1049 aa		33.21	■■■□□ 2.91
PDCD4-205	ENST00000467574	MRPL50	Q8N5N7	158 aa	Known RBP	33.2	■■■□□ 2.91
PDCD4-205	ENST00000467574	CCDC191	Q8NCU4	936 aa		33.2	■■■□□ 2.91
PDCD4-205	ENST00000467574	FER1L6	Q2WGJ9	1857 aa		33.2	■■■□□ 2.9
PDCD4-205	ENST00000467574	SBF1	O95248	1867 aa		33.19	■■■□□ 2.9
PDCD4-205	ENST00000467574	CT47B1	P0C2W7	299 aa	Predicted RBP	33.19	■■■□□ 2.9
PDCD4-205	ENST00000467574	HCLS1	P14317	486 aa	Predicted RBP	33.19	■■■□□ 2.9
PDCD4-205	ENST00000467574	CNKSR1	Q969H4	720 aa		33.19	■■■□□ 2.9
PDCD4-205	ENST00000467574	FAM89A	Q96GI7	184 aa		33.19	■■■□□ 2.9
PDCD4-205	ENST00000467574	PRPF40B	Q6NWY9	871 aa	Known RBP	33.18	■■■□□ 2.9
PDCD4-205	ENST00000467574	DNAAF4	Q8WXU2	420 aa		33.18	■■■□□ 2.9
PDCD4-205	ENST00000467574	CWC25	Q9NXE8	425 aa	Predicted RBP	33.18	■■■□□ 2.9
PDCD4-205	ENST00000467574	HOXA10	P31260	410 aa	Predicted RBP	33.16	■■■□□ 2.9
PDCD4-205	ENST00000467574	CWF19L2	Q2TBE0	894 aa	Known RBP	33.16	■■■□□ 2.9
PDCD4-205	ENST00000467574	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	33.16	■■■□□ 2.9
PDCD4-205	ENST00000467574	TAF1	P21675	1872 aa		33.16	■■■□□ 2.9
PDCD4-205	ENST00000467574	NEURL1B	A8MQ27	555 aa		33.15	■■■□□ 2.9
PDCD4-205	ENST00000467574		F6X3S4	739 aa		33.15	■■■□□ 2.9
PDCD4-205	ENST00000467574	MYH3	P11055	1940 aa		33.15	■■■□□ 2.9
PDCD4-205	ENST00000467574	NEXN	Q0ZGT2	675 aa		33.15	■■■□□ 2.9
PDCD4-205	ENST00000467574	ALDH1L2	Q3SY69	923 aa		33.15	■■■□□ 2.9
PDCD4-205	ENST00000467574	NLRP3	Q96P20	1036 aa		33.15	■■■□□ 2.9
PDCD4-205	ENST00000467574	BCL2L13	Q9BXK5	485 aa		33.14	■■■□□ 2.9
PDCD4-205	ENST00000467574	PCCA	P05165	728 aa	Predicted RBP	33.13	■■■□□ 2.89
PDCD4-205	ENST00000467574	RTL5	Q5HYW3	569 aa	Predicted RBP	33.13	■■■□□ 2.89
PDCD4-205	ENST00000467574	ARHGAP27	Q6ZUM4	889 aa		33.13	■■■□□ 2.89
PDCD4-205	ENST00000467574	CCDC88A	Q3V6T2	1871 aa		33.12	■■■□□ 2.89
PDCD4-205	ENST00000467574	C7orf43	Q8WVR3	580 aa		33.12	■■■□□ 2.89
PDCD4-205	ENST00000467574	RPGR	Q92834	1020 aa	Known RBP	33.12	■■■□□ 2.89
PDCD4-205	ENST00000467574	LINS1	Q8NG48	757 aa		33.11	■■■□□ 2.89
PDCD4-205	ENST00000467574	IRS4	O14654	1257 aa	Predicted RBP	33.1	■■■□□ 2.89
PDCD4-205	ENST00000467574	C21orf2	O43822	256 aa		33.1	■■■□□ 2.89
PDCD4-205	ENST00000467574	YY1	P25490	414 aa		33.1	■■■□□ 2.89
PDCD4-205	ENST00000467574	COL4A1	P02462	1669 aa		33.1	■■■□□ 2.89
PDCD4-205	ENST00000467574	ALDH1B1	P30837	517 aa		33.09	■■■□□ 2.89
PDCD4-205	ENST00000467574	BEND3	Q5T5X7	828 aa		33.09	■■■□□ 2.89
PDCD4-205	ENST00000467574	JARID2	Q92833	1246 aa	Predicted RBP	33.09	■■■□□ 2.89
PDCD4-205	ENST00000467574	CRAMP1	Q96RY5	1269 aa		33.09	■■■□□ 2.89
PDCD4-205	ENST00000467574	SMC4	Q9NTJ3	1288 aa		33.09	■■■□□ 2.89
PDCD4-205	ENST00000467574	PTPRC	P08575	1304 aa		33.08	■■■□□ 2.89
PDCD4-205	ENST00000467574	CDHR2	Q9BYE9	1310 aa		33.08	■■■□□ 2.89
PDCD4-205	ENST00000467574	ZNF219	Q9P2Y4	722 aa	Predicted RBP	33.08	■■■□□ 2.89
PDCD4-205	ENST00000467574	SNED1	Q8TER0	1413 aa		33.08	■■■□□ 2.89
PDCD4-205	ENST00000467574	NFKBIE	O00221	500 aa		33.07	■■■□□ 2.88
PDCD4-205	ENST00000467574	RARS	P54136	660 aa	Known RBP	33.07	■■■□□ 2.88
PDCD4-205	ENST00000467574	GCKR	Q14397	625 aa		33.07	■■■□□ 2.88
PDCD4-205	ENST00000467574	RBM17	Q96I25	401 aa	Known RBP	33.07	■■■□□ 2.88
PDCD4-205	ENST00000467574	ABCC4	O15439	1325 aa		33.06	■■■□□ 2.88
PDCD4-205	ENST00000467574	BRPF1	P55201	1214 aa	Predicted RBP	33.06	■■■□□ 2.88
PDCD4-205	ENST00000467574	SF3B3	Q15393	1217 aa	Known RBP	33.06	■■■□□ 2.88
PDCD4-205	ENST00000467574	RASSF7	Q02833	373 aa		33.05	■■■□□ 2.88
PDCD4-205	ENST00000467574	DICER1	Q9UPY3	1922 aa	Known RBP	33.04	■■■□□ 2.88
PDCD4-205	ENST00000467574		H7C1W4	665 aa		33.04	■■■□□ 2.88
PDCD4-205	ENST00000467574	CASP7	P55210	303 aa		33.04	■■■□□ 2.88
PDCD4-205	ENST00000467574	OLFM4	Q6UX06	510 aa		33.04	■■■□□ 2.88
PDCD4-205	ENST00000467574	SLC51A	Q86UW1	340 aa		33.04	■■■□□ 2.88
PDCD4-205	ENST00000467574	LRRC37A	A6NMS7	1700 aa		33.04	■■■□□ 2.88
PDCD4-205	ENST00000467574	PRELP	P51888	382 aa		33.03	■■■□□ 2.88
PDCD4-205	ENST00000467574	UBE3B	Q7Z3V4	1068 aa		33.02	■■■□□ 2.88
PDCD4-205	ENST00000467574	SOGA3	Q5TF21	947 aa		33.01	■■■□□ 2.87
PDCD4-205	ENST00000467574	TIAM2	Q8IVF5	1701 aa		33.01	■■■□□ 2.87
PDCD4-205	ENST00000467574	PDE8A	O60658	829 aa		33	■■■□□ 2.87
PDCD4-205	ENST00000467574	CCDC93	Q567U6	631 aa		33	■■■□□ 2.87
PDCD4-205	ENST00000467574	LTBP3	Q9NS15	1303 aa		33	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms