RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 HSP90AA2PQ14568 343 aaPredicted RBP17.75■□□□□ 0.43
PRPF38B-204ENST00000467302 RPAP1Q9BWH6 1393 aaPredicted RBP17.75■□□□□ 0.43
PRPF38B-204ENST00000467302 MAP4K4O95819 1239 aaPredicted RBP17.74■□□□□ 0.43
PRPF38B-204ENST00000467302 MCM5P33992 734 aa17.74■□□□□ 0.43
PRPF38B-204ENST00000467302 TMEM87AQ8NBN3 555 aa17.74■□□□□ 0.43
PRPF38B-204ENST00000467302 LINS1Q8NG48 757 aa17.74■□□□□ 0.43
PRPF38B-204ENST00000467302 SYAP1Q96A49 352 aaPredicted RBP17.74■□□□□ 0.43
PRPF38B-204ENST00000467302 ZKSCAN5Q9Y2L8 839 aa17.74■□□□□ 0.43
PRPF38B-204ENST00000467302 SNX14Q9Y5W7 946 aa17.74■□□□□ 0.43
PRPF38B-204ENST00000467302 MYL6BP14649 208 aa17.74■□□□□ 0.43
PRPF38B-204ENST00000467302 RIC3Q7Z5B4 369 aa17.74■□□□□ 0.43
PRPF38B-204ENST00000467302 TSPY26PQ9H489 355 aa17.74■□□□□ 0.43
PRPF38B-204ENST00000467302 TOGARAM1Q9Y4F4 1720 aa17.73■□□□□ 0.43
PRPF38B-204ENST00000467302 GADD45BO75293 160 aaPredicted RBP17.73■□□□□ 0.43
PRPF38B-204ENST00000467302 USP48Q86UV5 1035 aa17.73■□□□□ 0.43
PRPF38B-204ENST00000467302 USP16Q9Y5T5 823 aa17.73■□□□□ 0.43
PRPF38B-204ENST00000467302 KCPQ6ZWJ8 1503 aa17.72■□□□□ 0.43
PRPF38B-204ENST00000467302 CWF19L2Q2TBE0 894 aaKnown RBP17.72■□□□□ 0.43
PRPF38B-204ENST00000467302 CNTROBQ8N137 903 aa17.72■□□□□ 0.43
PRPF38B-204ENST00000467302 WNK3Q9BYP7 1800 aa17.72■□□□□ 0.43
PRPF38B-204ENST00000467302 RASEFQ8IZ41 740 aa17.72■□□□□ 0.43
PRPF38B-204ENST00000467302 XAGE3Q8WTP9 111 aa17.72■□□□□ 0.43
PRPF38B-204ENST00000467302 GDPD2Q9HCC8 539 aa17.72■□□□□ 0.43
PRPF38B-204ENST00000467302 BTG4Q9NY30 223 aa17.72■□□□□ 0.43
PRPF38B-204ENST00000467302 PHLPP1O60346 1717 aa17.72■□□□□ 0.43
PRPF38B-204ENST00000467302 HSP90AB4PQ58FF6 505 aa17.71■□□□□ 0.43
PRPF38B-204ENST00000467302 COPS6Q7L5N1 327 aa17.71■□□□□ 0.43
PRPF38B-204ENST00000467302 RNF214Q8ND24 703 aa17.71■□□□□ 0.43
PRPF38B-204ENST00000467302 DDX54Q8TDD1 881 aaKnown RBP17.71■□□□□ 0.43
PRPF38B-204ENST00000467302 CCDC39Q9UFE4 941 aa17.71■□□□□ 0.43
PRPF38B-204ENST00000467302 TNS2Q63HR2 1409 aa17.71■□□□□ 0.43
PRPF38B-204ENST00000467302 PHF14O94880 888 aa17.71■□□□□ 0.42
PRPF38B-204ENST00000467302 MTX1Q13505 466 aa17.71■□□□□ 0.42
PRPF38B-204ENST00000467302 RUFY3Q7L099 469 aa17.71■□□□□ 0.42
PRPF38B-204ENST00000467302 TTC41PQ6P2S7 1318 aa17.7■□□□□ 0.42
PRPF38B-204ENST00000467302 ARFGEF2Q9Y6D5 1785 aa17.7■□□□□ 0.42
PRPF38B-204ENST00000467302 DISP2A7MBM2 1401 aa17.7■□□□□ 0.42
PRPF38B-204ENST00000467302 GRM8O00222 908 aa17.7■□□□□ 0.42
PRPF38B-204ENST00000467302 AK2P54819 239 aa17.7■□□□□ 0.42
PRPF38B-204ENST00000467302 NEXNQ0ZGT2 675 aa17.7■□□□□ 0.42
PRPF38B-204ENST00000467302 UTYO14607 1347 aa17.7■□□□□ 0.42
PRPF38B-204ENST00000467302 FOXD4L6Q3SYB3 417 aaPredicted RBP17.69■□□□□ 0.42
PRPF38B-204ENST00000467302 FOXD4L3Q6VB84 417 aaPredicted RBP17.69■□□□□ 0.42
PRPF38B-204ENST00000467302 LRP10Q7Z4F1 713 aa17.69■□□□□ 0.42
PRPF38B-204ENST00000467302 LIMCH1Q9UPQ0 1083 aa17.69■□□□□ 0.42
PRPF38B-204ENST00000467302 GLRX3O76003 335 aaKnown RBP17.69■□□□□ 0.42
PRPF38B-204ENST00000467302 ZSCAN22P10073 491 aaPredicted RBP17.69■□□□□ 0.42
PRPF38B-204ENST00000467302 ANKRD13DQ6ZTN6 518 aa17.69■□□□□ 0.42
PRPF38B-204ENST00000467302 CWC27Q6UX04 472 aaKnown RBP17.68■□□□□ 0.42
PRPF38B-204ENST00000467302 METTL22Q9BUU2 404 aaPredicted RBP17.68■□□□□ 0.42
PRPF38B-204ENST00000467302 LRP6O75581 1613 aa17.68■□□□□ 0.42
PRPF38B-204ENST00000467302 AFDNP55196 1824 aaKnown RBP17.67■□□□□ 0.42
PRPF38B-204ENST00000467302 IGKV5-2P06315 115 aa17.67■□□□□ 0.42
PRPF38B-204ENST00000467302 SYT1P21579 422 aa17.67■□□□□ 0.42
PRPF38B-204ENST00000467302 KCNB2Q92953 911 aa17.67■□□□□ 0.42
PRPF38B-204ENST00000467302 MYD88Q99836 296 aa17.67■□□□□ 0.42
PRPF38B-204ENST00000467302 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.67■□□□□ 0.42
PRPF38B-204ENST00000467302 NEURL1BA8MQ27 555 aa17.66■□□□□ 0.42
PRPF38B-204ENST00000467302 STX6O43752 255 aa17.66■□□□□ 0.42
PRPF38B-204ENST00000467302 PIP4K2AP48426 406 aaPredicted RBP17.66■□□□□ 0.42
PRPF38B-204ENST00000467302 FAM184AQ8NB25 1140 aa17.66■□□□□ 0.42
PRPF38B-204ENST00000467302 SUCLG2Q96I99 432 aa17.66■□□□□ 0.42
PRPF38B-204ENST00000467302 CNPY2Q9Y2B0 182 aa17.66■□□□□ 0.42
PRPF38B-204ENST00000467302 NRAPQ86VF7 1730 aa17.66■□□□□ 0.42
PRPF38B-204ENST00000467302 OS9Q13438 667 aaPredicted RBP17.65■□□□□ 0.42
PRPF38B-204ENST00000467302 CSPP1Q1MSJ5 1256 aa17.65■□□□□ 0.42
PRPF38B-204ENST00000467302 UVSSAQ2YD98 709 aa17.65■□□□□ 0.42
PRPF38B-204ENST00000467302 CCDC183Q5T5S1 534 aa17.65■□□□□ 0.42
PRPF38B-204ENST00000467302 TCHHQ07283 1943 aa17.65■□□□□ 0.42
PRPF38B-204ENST00000467302 NUP188Q5SRE5 1749 aa17.65■□□□□ 0.42
PRPF38B-204ENST00000467302 ITGB4P16144 1822 aa17.64■□□□□ 0.41
PRPF38B-204ENST00000467302 CASTP20810 708 aaKnown RBP17.64■□□□□ 0.41
PRPF38B-204ENST00000467302 UBE2HP62256 183 aa17.64■□□□□ 0.41
PRPF38B-204ENST00000467302 GCKRQ14397 625 aa17.64■□□□□ 0.41
PRPF38B-204ENST00000467302 CLASRPQ8N2M8 674 aaKnown RBP17.64■□□□□ 0.41
PRPF38B-204ENST00000467302 RUFY2Q8WXA3 655 aa17.64■□□□□ 0.41
PRPF38B-204ENST00000467302 LARP6Q9BRS8 491 aaKnown RBP17.64■□□□□ 0.41
PRPF38B-204ENST00000467302 TMOD3Q9NYL9 352 aa17.64■□□□□ 0.41
PRPF38B-204ENST00000467302 R3HCC1Q9Y3T6 440 aaKnown RBP17.64■□□□□ 0.41
PRPF38B-204ENST00000467302 LARGE1O95461 756 aa17.64■□□□□ 0.41
PRPF38B-204ENST00000467302 F13A1P00488 732 aa17.64■□□□□ 0.41
PRPF38B-204ENST00000467302 PTH1RQ03431 593 aa17.64■□□□□ 0.41
PRPF38B-204ENST00000467302 VPS53Q5VIR6 699 aa17.64■□□□□ 0.41
PRPF38B-204ENST00000467302 KAZALD1Q96I82 304 aa17.64■□□□□ 0.41
PRPF38B-204ENST00000467302 TM6SF1Q9BZW5 370 aa17.64■□□□□ 0.41
PRPF38B-204ENST00000467302 BICC1Q9H694 974 aaKnown RBP17.64■□□□□ 0.41
PRPF38B-204ENST00000467302 DIAPH3Q9NSV4 1193 aa17.64■□□□□ 0.41
PRPF38B-204ENST00000467302 ECHDC1Q9NTX5 307 aa17.64■□□□□ 0.41
PRPF38B-204ENST00000467302 SMC3Q9UQE7 1217 aa17.64■□□□□ 0.41
PRPF38B-204ENST00000467302 CPA1P15085 419 aa17.63■□□□□ 0.41
PRPF38B-204ENST00000467302 GLIPR1L2Q4G1C9 344 aa17.63■□□□□ 0.41
PRPF38B-204ENST00000467302 ZSWIM6Q9HCJ5 1215 aa17.63■□□□□ 0.41
PRPF38B-204ENST00000467302 LETM1O95202 739 aaPredicted RBP17.62■□□□□ 0.41
PRPF38B-204ENST00000467302 ERC1Q8IUD2 1116 aa17.62■□□□□ 0.41
PRPF38B-204ENST00000467302 KLHL34Q8N239 644 aa17.62■□□□□ 0.41
PRPF38B-204ENST00000467302 PLBD2Q8NHP8 589 aa17.62■□□□□ 0.41
PRPF38B-204ENST00000467302 ATP6V1DQ9Y5K8 247 aa17.62■□□□□ 0.41
PRPF38B-204ENST00000467302 PTCD1O75127 700 aaKnown RBP17.62■□□□□ 0.41
PRPF38B-204ENST00000467302 ADCK5Q3MIX3 580 aa17.62■□□□□ 0.41
PRPF38B-204ENST00000467302 PDCL3Q9H2J4 239 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms