RNA–Protein interactions for RNA: ENST00000467041.1

SSR2-204, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 3

Gene SSR2, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-204ENST00000467041 UTP14AQ9BVJ6 771 aaKnown RBP29.3■■■□□ 2.28
SSR2-204ENST00000467041 TAOK3Q9H2K8 898 aa29.3■■■□□ 2.28
SSR2-204ENST00000467041 TNRC6CQ9HCJ0 1690 aaKnown RBP29.3■■■□□ 2.28
SSR2-204ENST00000467041 SENP3-EIF4A1A0A087X0R7 540 aa29.29■■■□□ 2.28
SSR2-204ENST00000467041 ELL2O00472 640 aaPredicted RBP29.29■■■□□ 2.28
SSR2-204ENST00000467041 C8orf58Q8NAV2 365 aa29.29■■■□□ 2.28
SSR2-204ENST00000467041 PLBD2Q8NHP8 589 aa29.29■■■□□ 2.28
SSR2-204ENST00000467041 SLC10A5Q5PT55 438 aa29.28■■■□□ 2.28
SSR2-204ENST00000467041 ANKRD13DQ6ZTN6 518 aa29.28■■■□□ 2.28
SSR2-204ENST00000467041 NLRP10Q86W26 655 aa29.28■■■□□ 2.28
SSR2-204ENST00000467041 HOXA10P31260 410 aaPredicted RBP29.27■■■□□ 2.28
SSR2-204ENST00000467041 CCDC93Q567U6 631 aa29.27■■■□□ 2.28
SSR2-204ENST00000467041 RNF123Q5XPI4 1314 aa29.26■■■□□ 2.27
SSR2-204ENST00000467041 RPGRQ92834 1020 aaKnown RBP29.26■■■□□ 2.27
SSR2-204ENST00000467041 NLRP3Q96P20 1036 aa29.25■■■□□ 2.27
SSR2-204ENST00000467041 ANKRD36CQ5JPF3 1778 aa29.25■■■□□ 2.27
SSR2-204ENST00000467041 TOMM70O94826 608 aa29.24■■■□□ 2.27
SSR2-204ENST00000467041 GLTPD2A6NH11 291 aa29.23■■■□□ 2.27
SSR2-204ENST00000467041 OLFM4Q6UX06 510 aa29.23■■■□□ 2.27
SSR2-204ENST00000467041 C3orf67Q6ZVT6 689 aa29.23■■■□□ 2.27
SSR2-204ENST00000467041 RTKN2Q8IZC4 609 aa29.23■■■□□ 2.27
SSR2-204ENST00000467041 CHMP4AQ9BY43 222 aa29.23■■■□□ 2.27
SSR2-204ENST00000467041 RRAGCQ9HB90 399 aa29.23■■■□□ 2.27
SSR2-204ENST00000467041 TSR2Q969E8 191 aaKnown RBP29.22■■■□□ 2.27
SSR2-204ENST00000467041 RBM17Q96I25 401 aaKnown RBP29.22■■■□□ 2.27
SSR2-204ENST00000467041 CRAMP1Q96RY5 1269 aa29.22■■■□□ 2.27
SSR2-204ENST00000467041 DICER1Q9UPY3 1922 aaKnown RBP29.22■■■□□ 2.27
SSR2-204ENST00000467041 IL16Q14005 1332 aa29.21■■■□□ 2.27
SSR2-204ENST00000467041 TSPYL6Q8N831 410 aa29.21■■■□□ 2.27
SSR2-204ENST00000467041 ISCA1Q9BUE6 129 aa29.21■■■□□ 2.27
SSR2-204ENST00000467041 TRMT112Q9UI30 125 aaKnown RBP29.21■■■□□ 2.27
SSR2-204ENST00000467041 TIAM2Q8IVF5 1701 aa29.2■■■□□ 2.27
SSR2-204ENST00000467041 FKBP4Q02790 459 aaKnown RBP eCLIP29.2■■■□□ 2.26
SSR2-204ENST00000467041 PHAXQ9H814 394 aaKnown RBP29.2■■■□□ 2.26
SSR2-204ENST00000467041 SH3TC1Q8TE82 1336 aa29.2■■■□□ 2.26
SSR2-204ENST00000467041 CCDC30Q5VVM6 783 aa29.19■■■□□ 2.26
SSR2-204ENST00000467041 CC2D2BQ6DHV5 1058 aa29.19■■■□□ 2.26
SSR2-204ENST00000467041 DPY19L2Q6NUT2 758 aa29.19■■■□□ 2.26
SSR2-204ENST00000467041 SYNE4Q8N205 404 aa29.19■■■□□ 2.26
SSR2-204ENST00000467041 ATP5J2-PTCD1G3V325 749 aa29.17■■■□□ 2.26
SSR2-204ENST00000467041 HCLS1P14317 486 aaPredicted RBP29.17■■■□□ 2.26
SSR2-204ENST00000467041 GOLGA2Q08379 1002 aa29.17■■■□□ 2.26
SSR2-204ENST00000467041 TRIM28Q13263 835 aaKnown RBP29.17■■■□□ 2.26
SSR2-204ENST00000467041 RIC3Q7Z5B4 369 aa29.17■■■□□ 2.26
SSR2-204ENST00000467041 C16orf71Q8IYS4 520 aaPredicted RBP29.17■■■□□ 2.26
SSR2-204ENST00000467041 FAM9BQ8IZU0 186 aa29.17■■■□□ 2.26
SSR2-204ENST00000467041 SALL2Q9Y467 1007 aaPredicted RBP29.17■■■□□ 2.26
SSR2-204ENST00000467041 HSPA6P17066 643 aa29.16■■■□□ 2.26
SSR2-204ENST00000467041 WDR63Q8IWG1 891 aa29.16■■■□□ 2.26
SSR2-204ENST00000467041 SNED1Q8TER0 1413 aa29.16■■■□□ 2.26
SSR2-204ENST00000467041 RBM46Q8TBY0 533 aaKnown RBP29.15■■■□□ 2.26
SSR2-204ENST00000467041 ZNF277Q9NRM2 450 aaPredicted RBP29.15■■■□□ 2.26
SSR2-204ENST00000467041 PPEF1O14829 653 aaPredicted RBP29.14■■■□□ 2.26
SSR2-204ENST00000467041 VEGFAP15692 232 aaPredicted RBP29.14■■■□□ 2.26
SSR2-204ENST00000467041 GRIPAP1Q4V328 841 aa29.14■■■□□ 2.26
SSR2-204ENST00000467041 ZNF428Q96B54 188 aa29.14■■■□□ 2.26
SSR2-204ENST00000467041 PSMD1Q99460 953 aa29.14■■■□□ 2.26
SSR2-204ENST00000467041 TWISTNBQ3B726 338 aaPredicted RBP29.13■■■□□ 2.25
SSR2-204ENST00000467041 FAM89AQ96GI7 184 aa29.12■■■□□ 2.25
SSR2-204ENST00000467041 IARSP41252 1262 aaKnown RBP29.11■■■□□ 2.25
SSR2-204ENST00000467041 ABCC4O15439 1325 aa29.11■■■□□ 2.25
SSR2-204ENST00000467041 TCERG1O14776 1098 aaKnown RBP29.1■■■□□ 2.25
SSR2-204ENST00000467041 DDX58O95786 925 aaKnown RBP29.1■■■□□ 2.25
SSR2-204ENST00000467041 LAMB2P55268 1798 aa29.09■■■□□ 2.25
SSR2-204ENST00000467041 POTECB2RU33 542 aa29.09■■■□□ 2.25
SSR2-204ENST00000467041 BBOX1O75936 387 aa29.09■■■□□ 2.25
SSR2-204ENST00000467041 STK31Q9BXU1 1019 aa29.09■■■□□ 2.25
SSR2-204ENST00000467041 ATP6V0A2Q9Y487 856 aa29.09■■■□□ 2.25
SSR2-204ENST00000467041 FANCIQ9NVI1 1328 aa29.09■■■□□ 2.25
SSR2-204ENST00000467041 DDNO94850 711 aaPredicted RBP29.08■■■□□ 2.25
SSR2-204ENST00000467041 DDX46Q7L014 1031 aaKnown RBP29.08■■■□□ 2.25
SSR2-204ENST00000467041 SLC51AQ86UW1 340 aa29.08■■■□□ 2.25
SSR2-204ENST00000467041 MYD88Q99836 296 aa29.08■■■□□ 2.25
SSR2-204ENST00000467041 TMX4Q9H1E5 349 aaPredicted RBP29.08■■■□□ 2.25
SSR2-204ENST00000467041 WDR90Q96KV7 1748 aa29.08■■■□□ 2.25
SSR2-204ENST00000467041 CEP350Q5VT06 3117 aa29.07■■■□□ 2.24
SSR2-204ENST00000467041 FSTL1Q12841 308 aa29.07■■■□□ 2.24
SSR2-204ENST00000467041 METTL22Q9BUU2 404 aaPredicted RBP29.07■■■□□ 2.24
SSR2-204ENST00000467041 SF3B3Q15393 1217 aaKnown RBP29.06■■■□□ 2.24
SSR2-204ENST00000467041 CCDC191Q8NCU4 936 aa29.06■■■□□ 2.24
SSR2-204ENST00000467041 GRAPQ13588 217 aa29.05■■■□□ 2.24
SSR2-204ENST00000467041 RTL5Q5HYW3 569 aaPredicted RBP29.05■■■□□ 2.24
SSR2-204ENST00000467041 KSR2Q6VAB6 950 aa29.05■■■□□ 2.24
SSR2-204ENST00000467041 SP8Q8IXZ3 490 aa29.05■■■□□ 2.24
SSR2-204ENST00000467041 ZBTB38Q8NAP3 1195 aaPredicted RBP29.05■■■□□ 2.24
SSR2-204ENST00000467041 GRAPLQ8TC17 118 aaPredicted RBP29.05■■■□□ 2.24
SSR2-204ENST00000467041 MAP3K2Q9Y2U5 619 aa29.05■■■□□ 2.24
SSR2-204ENST00000467041 DDX60Q8IY21 1712 aaKnown RBP29.04■■■□□ 2.24
SSR2-204ENST00000467041 IRS4O14654 1257 aaPredicted RBP29.04■■■□□ 2.24
SSR2-204ENST00000467041 PI4KAP2A4QPH2 592 aa29.03■■■□□ 2.24
SSR2-204ENST00000467041 FZD9O00144 591 aa29.03■■■□□ 2.24
SSR2-204ENST00000467041 SLC4A2P04920 1241 aa29.03■■■□□ 2.24
SSR2-204ENST00000467041 PI4KAP1Q8N8J0 262 aa29.03■■■□□ 2.24
SSR2-204ENST00000467041 SMC1BQ8NDV3 1235 aa29.03■■■□□ 2.24
SSR2-204ENST00000467041 JDP2Q8WYK2 163 aa29.03■■■□□ 2.24
SSR2-204ENST00000467041 SPINK5Q9NQ38 1064 aaPredicted RBP29.03■■■□□ 2.24
SSR2-204ENST00000467041 VAMP4O75379 141 aa29.02■■■□□ 2.24
SSR2-204ENST00000467041 EXOSC9Q06265 439 aaKnown RBP29.02■■■□□ 2.24
SSR2-204ENST00000467041 CWC25Q9NXE8 425 aaPredicted RBP29.02■■■□□ 2.24
SSR2-204ENST00000467041 ZNF541Q9H0D2 1346 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms