RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 GTF2E1P29083 439 aaPredicted RBP12.49□□□□□ -0.41
ABCF3-205ENST00000466416 CDC37L1Q7L3B6 337 aa12.49□□□□□ -0.41
ABCF3-205ENST00000466416 NIM1KQ8IY84 436 aa12.49□□□□□ -0.41
ABCF3-205ENST00000466416 GLIS2Q9BZE0 524 aaPredicted RBP12.49□□□□□ -0.41
ABCF3-205ENST00000466416 VPS33BQ9H267 617 aa12.49□□□□□ -0.41
ABCF3-205ENST00000466416 CRY2Q49AN0 593 aa12.48□□□□□ -0.41
ABCF3-205ENST00000466416 IL17REQ8NFR9 667 aa12.48□□□□□ -0.41
ABCF3-205ENST00000466416 ZIC5Q96T25 663 aa12.48□□□□□ -0.41
ABCF3-205ENST00000466416 GNAT3A8MTJ3 354 aa12.47□□□□□ -0.41
ABCF3-205ENST00000466416 HOXA10P31260 410 aaPredicted RBP12.47□□□□□ -0.41
ABCF3-205ENST00000466416 HUNKP57058 714 aa12.47□□□□□ -0.41
ABCF3-205ENST00000466416 NBPF15Q8N660 670 aa12.47□□□□□ -0.41
ABCF3-205ENST00000466416 ZNF408Q9H9D4 720 aa12.47□□□□□ -0.41
ABCF3-205ENST00000466416 USP16Q9Y5T5 823 aa12.47□□□□□ -0.41
ABCF3-205ENST00000466416 COL4A5P29400 1685 aa12.46□□□□□ -0.41
ABCF3-205ENST00000466416 FAM177BA6PVY3 158 aa12.46□□□□□ -0.41
ABCF3-205ENST00000466416 CTU1Q7Z7A3 348 aaKnown RBP12.46□□□□□ -0.41
ABCF3-205ENST00000466416 CCDC102AQ96A19 550 aa12.46□□□□□ -0.41
ABCF3-205ENST00000466416 NYXQ9GZU5 481 aa12.46□□□□□ -0.41
ABCF3-205ENST00000466416 CDHR2Q9BYE9 1310 aa12.45□□□□□ -0.42
ABCF3-205ENST00000466416 BTBD11A6QL63 1104 aa12.45□□□□□ -0.42
ABCF3-205ENST00000466416 PPIP5K2O43314 1243 aa12.45□□□□□ -0.42
ABCF3-205ENST00000466416 CXCL9Q07325 125 aa12.45□□□□□ -0.42
ABCF3-205ENST00000466416 RGMBQ6NW40 437 aa12.45□□□□□ -0.42
ABCF3-205ENST00000466416 GAS2L2Q8NHY3 880 aa12.45□□□□□ -0.42
ABCF3-205ENST00000466416 RPGRQ92834 1020 aaKnown RBP12.45□□□□□ -0.42
ABCF3-205ENST00000466416 TMX4Q9H1E5 349 aaPredicted RBP12.45□□□□□ -0.42
ABCF3-205ENST00000466416 RNF186Q9NXI6 227 aa12.45□□□□□ -0.42
ABCF3-205ENST00000466416 ZNRF3Q9ULT6 936 aa12.45□□□□□ -0.42
ABCF3-205ENST00000466416 KNSTRNQ9Y448 316 aa12.45□□□□□ -0.42
ABCF3-205ENST00000466416 NPC1L1Q9UHC9 1359 aa12.44□□□□□ -0.42
ABCF3-205ENST00000466416 KIF7Q2M1P5 1343 aa12.44□□□□□ -0.42
ABCF3-205ENST00000466416 BCORQ6W2J9 1755 aa12.44□□□□□ -0.42
ABCF3-205ENST00000466416 FAM155AB1AL88 458 aaPredicted RBP12.44□□□□□ -0.42
ABCF3-205ENST00000466416 DIAPH1O60610 1272 aaKnown RBP12.44□□□□□ -0.42
ABCF3-205ENST00000466416 TRPA1O75762 1119 aa12.44□□□□□ -0.42
ABCF3-205ENST00000466416 SNRPA1P09661 255 aaKnown RBP12.44□□□□□ -0.42
ABCF3-205ENST00000466416 PIP4K2AP48426 406 aaPredicted RBP12.44□□□□□ -0.42
ABCF3-205ENST00000466416 GMPSP49915 693 aaPredicted RBP12.44□□□□□ -0.42
ABCF3-205ENST00000466416 KIF23Q02241 960 aaPredicted RBP12.44□□□□□ -0.42
ABCF3-205ENST00000466416 PKN2Q16513 984 aaKnown RBP12.44□□□□□ -0.42
ABCF3-205ENST00000466416 RBM17Q96I25 401 aaKnown RBP12.44□□□□□ -0.42
ABCF3-205ENST00000466416 CRAMP1Q96RY5 1269 aa12.44□□□□□ -0.42
ABCF3-205ENST00000466416 KCNQ3O43525 872 aa12.43□□□□□ -0.42
ABCF3-205ENST00000466416 HIRAP54198 1017 aaPredicted RBP12.43□□□□□ -0.42
ABCF3-205ENST00000466416 TNIP1Q15025 636 aa12.43□□□□□ -0.42
ABCF3-205ENST00000466416 REM2Q8IYK8 340 aaPredicted RBP12.43□□□□□ -0.42
ABCF3-205ENST00000466416 C2orf69Q8N8R5 385 aa12.43□□□□□ -0.42
ABCF3-205ENST00000466416 SUPT20HQ8NEM7 779 aa12.43□□□□□ -0.42
ABCF3-205ENST00000466416 BCL2L13Q9BXK5 485 aa12.43□□□□□ -0.42
ABCF3-205ENST00000466416 PPEF1O14829 653 aaPredicted RBP12.42□□□□□ -0.42
ABCF3-205ENST00000466416 HLFQ16534 295 aa12.42□□□□□ -0.42
ABCF3-205ENST00000466416 AOC3Q16853 763 aa12.42□□□□□ -0.42
ABCF3-205ENST00000466416 USP48Q86UV5 1035 aa12.42□□□□□ -0.42
ABCF3-205ENST00000466416 HPS5Q9UPZ3 1129 aa12.42□□□□□ -0.42
ABCF3-205ENST00000466416 NBPF26B4DH59 902 aa12.41□□□□□ -0.42
ABCF3-205ENST00000466416 H7C1D1 291 aa12.41□□□□□ -0.42
ABCF3-205ENST00000466416 ZNF157P51786 506 aaPredicted RBP12.41□□□□□ -0.42
ABCF3-205ENST00000466416 HABP4Q5JVS0 413 aaKnown RBP12.41□□□□□ -0.42
ABCF3-205ENST00000466416 NBPF10Q6P3W6 841 aaKnown RBP12.41□□□□□ -0.42
ABCF3-205ENST00000466416 NUTM1Q86Y26 1132 aa12.41□□□□□ -0.42
ABCF3-205ENST00000466416 GBA2Q9HCG7 927 aaPredicted RBP12.41□□□□□ -0.42
ABCF3-205ENST00000466416 CNOT7Q9UIV1 285 aaKnown RBP12.41□□□□□ -0.42
ABCF3-205ENST00000466416 CEMIPQ8WUJ3 1361 aa12.41□□□□□ -0.42
ABCF3-205ENST00000466416 PRAMEF22A3QJZ6 481 aa12.4□□□□□ -0.42
ABCF3-205ENST00000466416 ERVV-1B6SEH8 477 aa12.4□□□□□ -0.42
ABCF3-205ENST00000466416 TCERG1O14776 1098 aaKnown RBP12.4□□□□□ -0.42
ABCF3-205ENST00000466416 TRPM4Q8TD43 1214 aa12.4□□□□□ -0.42
ABCF3-205ENST00000466416 CSRNP1Q96S65 589 aa12.4□□□□□ -0.42
ABCF3-205ENST00000466416 RTFDC1Q9BY42 306 aaPredicted RBP12.4□□□□□ -0.42
ABCF3-205ENST00000466416 ATP6V0A2Q9Y487 856 aa12.4□□□□□ -0.42
ABCF3-205ENST00000466416 RIC1Q4ADV7 1423 aa12.39□□□□□ -0.43
ABCF3-205ENST00000466416 ABCC12Q96J65 1359 aa12.39□□□□□ -0.43
ABCF3-205ENST00000466416 RAD17O75943 681 aa12.38□□□□□ -0.43
ABCF3-205ENST00000466416 KIAA2012Q0VF49 1180 aa12.38□□□□□ -0.43
ABCF3-205ENST00000466416 AMER1Q5JTC6 1135 aaPredicted RBP12.38□□□□□ -0.43
ABCF3-205ENST00000466416 KRT26Q7Z3Y9 468 aa12.38□□□□□ -0.43
ABCF3-205ENST00000466416 DPF2Q92785 391 aa12.38□□□□□ -0.43
ABCF3-205ENST00000466416 HDAC9Q9UKV0 1011 aa12.38□□□□□ -0.43
ABCF3-205ENST00000466416 TIMELESSQ9UNS1 1208 aa12.38□□□□□ -0.43
ABCF3-205ENST00000466416 SLC10A3P09131 477 aa12.37□□□□□ -0.43
ABCF3-205ENST00000466416 IBTKQ9P2D0 1353 aaPredicted RBP12.37□□□□□ -0.43
ABCF3-205ENST00000466416 SIPA1L3O60292 1781 aaPredicted RBP12.36□□□□□ -0.43
ABCF3-205ENST00000466416 BBOX1O75936 387 aa12.36□□□□□ -0.43
ABCF3-205ENST00000466416 DPP8Q6V1X1 898 aaPredicted RBP12.36□□□□□ -0.43
ABCF3-205ENST00000466416 SP8Q8IXZ3 490 aa12.36□□□□□ -0.43
ABCF3-205ENST00000466416 MICALL2Q8IY33 904 aa12.36□□□□□ -0.43
ABCF3-205ENST00000466416 MPNDQ8N594 471 aa12.36□□□□□ -0.43
ABCF3-205ENST00000466416 DCPSQ96C86 337 aaKnown RBP12.36□□□□□ -0.43
ABCF3-205ENST00000466416 NLRP3Q96P20 1036 aa12.36□□□□□ -0.43
ABCF3-205ENST00000466416 U2SURPO15042 1029 aaKnown RBP12.35□□□□□ -0.43
ABCF3-205ENST00000466416 SUSD4Q5VX71 490 aa12.35□□□□□ -0.43
ABCF3-205ENST00000466416 DLK2Q6UY11 383 aa12.35□□□□□ -0.43
ABCF3-205ENST00000466416 SLC51AQ86UW1 340 aa12.35□□□□□ -0.43
ABCF3-205ENST00000466416 AKAP11Q9UKA4 1901 aa12.35□□□□□ -0.43
ABCF3-205ENST00000466416 MAP3K15Q6ZN16 1313 aa12.35□□□□□ -0.43
ABCF3-205ENST00000466416 SHTN1A0MZ66 631 aa12.34□□□□□ -0.43
ABCF3-205ENST00000466416 EIF4G2P78344 907 aaKnown RBP eCLIP12.34□□□□□ -0.43
ABCF3-205ENST00000466416 FBXO46Q6PJ61 603 aaPredicted RBP12.34□□□□□ -0.43
ABCF3-205ENST00000466416 KIF6Q6ZMV9 814 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms