RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 ARHGEF1Q92888 912 aaKnown RBP15.11■□□□□ 0.01
VPS16-206ENST00000466415 NIP7Q9Y221 180 aaKnown RBP eCLIP15.11■□□□□ 0.01
VPS16-206ENST00000466415 C4AP0C0L4 1744 aa15.1■□□□□ 0.01
VPS16-206ENST00000466415 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.1■□□□□ 0.01
VPS16-206ENST00000466415 H7C1W4 665 aa15.1■□□□□ 0.01
VPS16-206ENST00000466415 SRGAP3O43295 1099 aa15.1■□□□□ 0.01
VPS16-206ENST00000466415 PCCAP05165 728 aaPredicted RBP15.1■□□□□ 0.01
VPS16-206ENST00000466415 RTL5Q5HYW3 569 aaPredicted RBP15.1■□□□□ 0.01
VPS16-206ENST00000466415 SMIM5Q71RC9 77 aa15.1■□□□□ 0.01
VPS16-206ENST00000466415 PPP1R42Q7Z4L9 355 aa15.1■□□□□ 0.01
VPS16-206ENST00000466415 ZBTB38Q8NAP3 1195 aaPredicted RBP15.1■□□□□ 0.01
VPS16-206ENST00000466415 JARID2Q92833 1246 aaPredicted RBP15.1■□□□□ 0.01
VPS16-206ENST00000466415 BICC1Q9H694 974 aaKnown RBP15.1■□□□□ 0.01
VPS16-206ENST00000466415 TFCP2L1Q9NZI6 479 aa15.1■□□□□ 0.01
VPS16-206ENST00000466415 SRP68Q9UHB9 627 aaKnown RBP15.1■□□□□ 0.01
VPS16-206ENST00000466415 TRMT112Q9UI30 125 aaKnown RBP15.1■□□□□ 0.01
VPS16-206ENST00000466415 USP42Q9H9J4 1324 aaKnown RBP15.1■□□□□ 0.01
VPS16-206ENST00000466415 UBR3Q6ZT12 1888 aa15.1■□□□□ 0.01
VPS16-206ENST00000466415 PNMA6EA0A0J9YXQ4 647 aa15.09■□□□□ 0.01
VPS16-206ENST00000466415 EN1Q05925 392 aaPredicted RBP15.09■□□□□ 0.01
VPS16-206ENST00000466415 SMC5Q8IY18 1101 aa15.09■□□□□ 0.01
VPS16-206ENST00000466415 UBN2Q6ZU65 1347 aa15.09■□□□□ 0.01
VPS16-206ENST00000466415 FAM177BA6PVY3 158 aa15.08■□□□□ 0
VPS16-206ENST00000466415 CASP7P55210 303 aa15.08■□□□□ 0
VPS16-206ENST00000466415 MTX1Q13505 466 aa15.08■□□□□ 0
VPS16-206ENST00000466415 EZH2Q15910 746 aaKnown RBP15.08■□□□□ 0
VPS16-206ENST00000466415 FAM89AQ96GI7 184 aa15.08■□□□□ 0
VPS16-206ENST00000466415 UTP14AQ9BVJ6 771 aaKnown RBP15.08■□□□□ 0
VPS16-206ENST00000466415 CHMP3Q9Y3E7 222 aa15.08■□□□□ 0
VPS16-206ENST00000466415 CDHR2Q9BYE9 1310 aa15.08■□□□□ 0
VPS16-206ENST00000466415 MSH5O43196 834 aa15.07■□□□□ 0
VPS16-206ENST00000466415 HSP90B1P14625 803 aaKnown RBP15.07■□□□□ 0
VPS16-206ENST00000466415 ZNF827Q17R98 1081 aa15.07■□□□□ 0
VPS16-206ENST00000466415 BICDL1Q6ZP65 573 aa15.07■□□□□ 0
VPS16-206ENST00000466415 AMIGO3Q86WK7 504 aa15.07■□□□□ 0
VPS16-206ENST00000466415 FLAD1Q8NFF5 587 aa15.07■□□□□ 0
VPS16-206ENST00000466415 SSH3Q8TE77 659 aa15.07■□□□□ 0
VPS16-206ENST00000466415 AKT1S1Q96B36 256 aa15.07■□□□□ 0
VPS16-206ENST00000466415 CAMKK2Q96RR4 588 aa15.07■□□□□ 0
VPS16-206ENST00000466415 DCTPP1Q9H773 170 aa15.07■□□□□ 0
VPS16-206ENST00000466415 PDZRN3Q9UPQ7 1066 aa15.07■□□□□ 0
VPS16-206ENST00000466415 SH3TC1Q8TE82 1336 aa15.07■□□□□ 0
VPS16-206ENST00000466415 OS9Q13438 667 aaPredicted RBP15.06■□□□□ 0
VPS16-206ENST00000466415 POLA2Q14181 598 aa15.06■□□□□ 0
VPS16-206ENST00000466415 ANKRD45Q5TZF3 282 aa15.06■□□□□ 0
VPS16-206ENST00000466415 SUSD4Q5VX71 490 aa15.06■□□□□ 0
VPS16-206ENST00000466415 TBC1D9BQ66K14 1250 aa15.06■□□□□ 0
VPS16-206ENST00000466415 CCDC125Q86Z20 511 aa15.06■□□□□ 0
VPS16-206ENST00000466415 KAZALD1Q96I82 304 aa15.06■□□□□ 0
VPS16-206ENST00000466415 SETDB2Q96T68 719 aa15.06■□□□□ 0
VPS16-206ENST00000466415 STK32BQ9NY57 414 aa15.06■□□□□ 0
VPS16-206ENST00000466415 EP400Q96L91 3159 aa15.05■□□□□ -0
VPS16-206ENST00000466415 IRS4O14654 1257 aaPredicted RBP15.05■□□□□ -0
VPS16-206ENST00000466415 NPHP1O15259 732 aa15.05■□□□□ -0
VPS16-206ENST00000466415 GTF2E1P29083 439 aaPredicted RBP15.05■□□□□ -0
VPS16-206ENST00000466415 RGS3P49796 1198 aa15.05■□□□□ -0
VPS16-206ENST00000466415 NUCB1Q02818 461 aa15.05■□□□□ -0
VPS16-206ENST00000466415 RABL6Q3YEC7 729 aaPredicted RBP15.05■□□□□ -0
VPS16-206ENST00000466415 HSP90AB4PQ58FF6 505 aa15.05■□□□□ -0
VPS16-206ENST00000466415 EPHA10Q5JZY3 1008 aa15.05■□□□□ -0
VPS16-206ENST00000466415 LMBR1LQ6UX01 489 aa15.05■□□□□ -0
VPS16-206ENST00000466415 NYXQ9GZU5 481 aa15.05■□□□□ -0
VPS16-206ENST00000466415 BCL2L12Q9HB09 334 aa15.05■□□□□ -0
VPS16-206ENST00000466415 EXOC6BQ9Y2D4 811 aa15.05■□□□□ -0
VPS16-206ENST00000466415 APBB1O00213 710 aa15.04■□□□□ -0
VPS16-206ENST00000466415 SURF6O75683 361 aaKnown RBP15.04■□□□□ -0
VPS16-206ENST00000466415 NTSR2O95665 410 aa15.04■□□□□ -0
VPS16-206ENST00000466415 DEFB132Q7Z7B7 95 aa15.04■□□□□ -0
VPS16-206ENST00000466415 CHD1LQ86WJ1 897 aa15.04■□□□□ -0
VPS16-206ENST00000466415 PLA2G12BQ9BX93 195 aa15.04■□□□□ -0
VPS16-206ENST00000466415 COL24A1Q17RW2 1714 aa15.03■□□□□ -0
VPS16-206ENST00000466415 CARMIL3Q8ND23 1372 aa15.03■□□□□ -0
VPS16-206ENST00000466415 PDE8AO60658 829 aa15.03■□□□□ -0
VPS16-206ENST00000466415 RAB11FIP3O75154 756 aa15.03■□□□□ -0
VPS16-206ENST00000466415 FOXO4P98177 505 aa15.03■□□□□ -0
VPS16-206ENST00000466415 NBPF5PQ86XG9 351 aaPredicted RBP15.03■□□□□ -0
VPS16-206ENST00000466415 LNPKQ9C0E8 428 aa15.03■□□□□ -0
VPS16-206ENST00000466415 TUBGCP6Q96RT7 1819 aa15.02■□□□□ -0
VPS16-206ENST00000466415 CTSWP56202 376 aa15.02■□□□□ -0
VPS16-206ENST00000466415 G3BP1Q13283 466 aaKnown RBP eCLIP15.02■□□□□ -0
VPS16-206ENST00000466415 TAF7LQ5H9L4 462 aa15.02■□□□□ -0
VPS16-206ENST00000466415 ERC1Q8IUD2 1116 aa15.02■□□□□ -0
VPS16-206ENST00000466415 LRRCC1Q9C099 1032 aa15.02■□□□□ -0
VPS16-206ENST00000466415 BCL11AQ9H165 835 aa15.02■□□□□ -0
VPS16-206ENST00000466415 LAMB2P55268 1798 aa15.02□□□□□ -0.01
VPS16-206ENST00000466415 GYS1P13807 737 aa15.01□□□□□ -0.01
VPS16-206ENST00000466415 SLC15A2Q16348 729 aa15.01□□□□□ -0.01
VPS16-206ENST00000466415 CCDC57Q2TAC2 916 aa15.01□□□□□ -0.01
VPS16-206ENST00000466415 SKAP1Q86WV1 359 aa15.01□□□□□ -0.01
VPS16-206ENST00000466415 NUTM1Q86Y26 1132 aa15.01□□□□□ -0.01
VPS16-206ENST00000466415 SYNE4Q8N205 404 aa15.01□□□□□ -0.01
VPS16-206ENST00000466415 PA2G4Q9UQ80 394 aaKnown RBP15.01□□□□□ -0.01
VPS16-206ENST00000466415 PNPLA7Q6ZV29 1317 aa15□□□□□ -0.01
VPS16-206ENST00000466415 HCLS1P14317 486 aaPredicted RBP15□□□□□ -0.01
VPS16-206ENST00000466415 NFIXQ14938 502 aa15□□□□□ -0.01
VPS16-206ENST00000466415 FAM161AQ3B820 660 aa15□□□□□ -0.01
VPS16-206ENST00000466415 ERFEQ4G0M1 354 aa15□□□□□ -0.01
VPS16-206ENST00000466415 TPTE2Q6XPS3 522 aa15□□□□□ -0.01
VPS16-206ENST00000466415 COL23A1Q86Y22 540 aaPredicted RBP15□□□□□ -0.01
VPS16-206ENST00000466415 KIF1BPQ96EK5 621 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms