RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 LMBR1LQ6UX01 489 aa16.54■□□□□ 0.24
UBE4B-206ENST00000466379 VSIG10Q8N0Z9 540 aa16.54■□□□□ 0.24
UBE4B-206ENST00000466379 CNTROBQ8N137 903 aa16.54■□□□□ 0.24
UBE4B-206ENST00000466379 LRP6O75581 1613 aa16.54■□□□□ 0.24
UBE4B-206ENST00000466379 GLRX3O76003 335 aaKnown RBP16.53■□□□□ 0.24
UBE4B-206ENST00000466379 FOXO4P98177 505 aa16.53■□□□□ 0.24
UBE4B-206ENST00000466379 DDB1Q16531 1140 aa16.53■□□□□ 0.24
UBE4B-206ENST00000466379 ACSBG1Q96GR2 724 aa16.53■□□□□ 0.24
UBE4B-206ENST00000466379 K7ELQ4 463 aaPredicted RBP16.53■□□□□ 0.24
UBE4B-206ENST00000466379 STARD3NLO95772 234 aa16.53■□□□□ 0.24
UBE4B-206ENST00000466379 GPATCH3Q96I76 525 aa16.52■□□□□ 0.24
UBE4B-206ENST00000466379 TEX13AQ9BXU3 409 aaPredicted RBP16.52■□□□□ 0.24
UBE4B-206ENST00000466379 COPRSQ9NQ92 184 aa16.52■□□□□ 0.24
UBE4B-206ENST00000466379 COL15A1P39059 1388 aa16.52■□□□□ 0.24
UBE4B-206ENST00000466379 UBAP1LF5GYI3 381 aa16.52■□□□□ 0.23
UBE4B-206ENST00000466379 PALD1Q9ULE6 856 aa16.52■□□□□ 0.23
UBE4B-206ENST00000466379 TFCP2Q12800 502 aa16.51■□□□□ 0.23
UBE4B-206ENST00000466379 KIF6Q6ZMV9 814 aa16.51■□□□□ 0.23
UBE4B-206ENST00000466379 CCDC191Q8NCU4 936 aa16.51■□□□□ 0.23
UBE4B-206ENST00000466379 SPATA31A5Q5VU36 1347 aa16.51■□□□□ 0.23
UBE4B-206ENST00000466379 SPATA31A7Q8IWB4 1347 aa16.51■□□□□ 0.23
UBE4B-206ENST00000466379 CYP19A1P11511 503 aaPredicted RBP16.5■□□□□ 0.23
UBE4B-206ENST00000466379 ISCA1Q9BUE6 129 aa16.5■□□□□ 0.23
UBE4B-206ENST00000466379 TCIRG1Q13488 830 aa16.5■□□□□ 0.23
UBE4B-206ENST00000466379 CWC27Q6UX04 472 aaKnown RBP16.5■□□□□ 0.23
UBE4B-206ENST00000466379 MARCH10Q8NA82 808 aaPredicted RBP16.5■□□□□ 0.23
UBE4B-206ENST00000466379 CHMP5Q9NZZ3 219 aa16.5■□□□□ 0.23
UBE4B-206ENST00000466379 ZBTB1Q9Y2K1 713 aa16.5■□□□□ 0.23
UBE4B-206ENST00000466379 THRAP3Q9Y2W1 955 aaKnown RBP16.5■□□□□ 0.23
UBE4B-206ENST00000466379 HSP90AA1P07900 732 aaKnown RBP16.49■□□□□ 0.23
UBE4B-206ENST00000466379 CDCA7Q9BWT1 371 aaPredicted RBP16.49■□□□□ 0.23
UBE4B-206ENST00000466379 SLIT2O94813 1529 aa16.49■□□□□ 0.23
UBE4B-206ENST00000466379 HLFQ16534 295 aa16.49■□□□□ 0.23
UBE4B-206ENST00000466379 TPRNQ4KMQ1 711 aa16.49■□□□□ 0.23
UBE4B-206ENST00000466379 BOLA2Q9H3K6 86 aa16.49■□□□□ 0.23
UBE4B-206ENST00000466379 SGSM2O43147 1006 aa16.48■□□□□ 0.23
UBE4B-206ENST00000466379 ZNF594Q96JF6 807 aaPredicted RBP16.48■□□□□ 0.23
UBE4B-206ENST00000466379 GPTP24298 496 aa16.48■□□□□ 0.23
UBE4B-206ENST00000466379 DDIT3P35638 169 aa16.48■□□□□ 0.23
UBE4B-206ENST00000466379 DEKP35659 375 aaKnown RBP16.48■□□□□ 0.23
UBE4B-206ENST00000466379 TNNI3KQ59H18 835 aa16.48■□□□□ 0.23
UBE4B-206ENST00000466379 FPGT-TNNI3KV9GXZ4 949 aa16.48■□□□□ 0.23
UBE4B-206ENST00000466379 NWD2Q9ULI1 1742 aa16.47■□□□□ 0.23
UBE4B-206ENST00000466379 MCCP23508 829 aa16.47■□□□□ 0.23
UBE4B-206ENST00000466379 DIAPH3Q9NSV4 1193 aa16.47■□□□□ 0.23
UBE4B-206ENST00000466379 DBNLQ9UJU6 430 aaKnown RBP16.47■□□□□ 0.23
UBE4B-206ENST00000466379 MAP3K15Q6ZN16 1313 aa16.47■□□□□ 0.23
UBE4B-206ENST00000466379 FAM89AQ96GI7 184 aa16.47■□□□□ 0.23
UBE4B-206ENST00000466379 C8orf37Q96NL8 207 aa16.47■□□□□ 0.23
UBE4B-206ENST00000466379 CCDC85AQ96PX6 553 aaPredicted RBP16.47■□□□□ 0.23
UBE4B-206ENST00000466379 SYNE4Q8N205 404 aa16.46■□□□□ 0.23
UBE4B-206ENST00000466379 EVI5LQ96CN4 794 aa16.46■□□□□ 0.23
UBE4B-206ENST00000466379 ST18O60284 1047 aa16.45■□□□□ 0.22
UBE4B-206ENST00000466379 FAM98CQ17RN3 349 aaKnown RBP16.45■□□□□ 0.22
UBE4B-206ENST00000466379 LRRC24Q50LG9 513 aa16.45■□□□□ 0.22
UBE4B-206ENST00000466379 ATG9AQ7Z3C6 839 aa16.45■□□□□ 0.22
UBE4B-206ENST00000466379 EDC3Q96F86 508 aaKnown RBP16.45■□□□□ 0.22
UBE4B-206ENST00000466379 DBNDD2Q9BQY9 259 aa16.45■□□□□ 0.22
UBE4B-206ENST00000466379 LSG1Q9H089 658 aaKnown RBP16.45■□□□□ 0.22
UBE4B-206ENST00000466379 TBC1D2BQ9UPU7 963 aa16.45■□□□□ 0.22
UBE4B-206ENST00000466379 NDUFB9Q9Y6M9 179 aa16.45■□□□□ 0.22
UBE4B-206ENST00000466379 NEK4P51957 841 aa16.44■□□□□ 0.22
UBE4B-206ENST00000466379 GIGYF2Q6Y7W6 1299 aaKnown RBP16.44■□□□□ 0.22
UBE4B-206ENST00000466379 BARGINQ6ZT62 677 aa16.44■□□□□ 0.22
UBE4B-206ENST00000466379 NGLY1Q96IV0 654 aa16.44■□□□□ 0.22
UBE4B-206ENST00000466379 RAD50Q92878 1312 aa16.43■□□□□ 0.22
UBE4B-206ENST00000466379 HSPA4P34932 840 aa16.43■□□□□ 0.22
UBE4B-206ENST00000466379 FAM227BQ96M60 508 aa16.43■□□□□ 0.22
UBE4B-206ENST00000466379 PUS3Q9BZE2 481 aaKnown RBP16.43■□□□□ 0.22
UBE4B-206ENST00000466379 KCNQ2O43526 872 aa16.43■□□□□ 0.22
UBE4B-206ENST00000466379 PCCAP05165 728 aaPredicted RBP16.43■□□□□ 0.22
UBE4B-206ENST00000466379 ATP6V1AP38606 617 aa16.43■□□□□ 0.22
UBE4B-206ENST00000466379 TRIM28Q13263 835 aaKnown RBP16.43■□□□□ 0.22
UBE4B-206ENST00000466379 FSD1Q9BTV5 496 aa16.43■□□□□ 0.22
UBE4B-206ENST00000466379 NMIQ13287 307 aaPredicted RBP16.42■□□□□ 0.22
UBE4B-206ENST00000466379 NOL8Q76FK4 1167 aaKnown RBP16.42■□□□□ 0.22
UBE4B-206ENST00000466379 NLRP10Q86W26 655 aa16.42■□□□□ 0.22
UBE4B-206ENST00000466379 DZIP3Q86Y13 1208 aaKnown RBP16.42■□□□□ 0.22
UBE4B-206ENST00000466379 PTH1RQ03431 593 aa16.42■□□□□ 0.22
UBE4B-206ENST00000466379 KIAA1211Q6ZU35 1233 aa16.42■□□□□ 0.22
UBE4B-206ENST00000466379 ZBTB38Q8NAP3 1195 aaPredicted RBP16.42■□□□□ 0.22
UBE4B-206ENST00000466379 NEUROD6Q96NK8 337 aa16.42■□□□□ 0.22
UBE4B-206ENST00000466379 UPF3BQ9BZI7 483 aaKnown RBP16.42■□□□□ 0.22
UBE4B-206ENST00000466379 EYA2O00167 538 aa16.41■□□□□ 0.22
UBE4B-206ENST00000466379 ANAPC15P60006 121 aa16.41■□□□□ 0.22
UBE4B-206ENST00000466379 ITPK1Q13572 414 aa16.41■□□□□ 0.22
UBE4B-206ENST00000466379 INTS5Q6P9B9 1019 aaKnown RBP16.41■□□□□ 0.22
UBE4B-206ENST00000466379 RUFY2Q8WXA3 655 aa16.41■□□□□ 0.22
UBE4B-206ENST00000466379 ANKRD36CQ5JPF3 1778 aa16.4■□□□□ 0.22
UBE4B-206ENST00000466379 LOC102724428A0A0B4J2F2 783 aa16.4■□□□□ 0.22
UBE4B-206ENST00000466379 ATP5JP18859 108 aa16.4■□□□□ 0.22
UBE4B-206ENST00000466379 IL6STP40189 918 aaPredicted RBP16.4■□□□□ 0.22
UBE4B-206ENST00000466379 SIK1P57059 783 aa16.4■□□□□ 0.22
UBE4B-206ENST00000466379 TIMM10P62072 90 aa16.4■□□□□ 0.22
UBE4B-206ENST00000466379 DNAJC2Q99543 621 aaKnown RBP16.4■□□□□ 0.22
UBE4B-206ENST00000466379 BCL9LQ86UU0 1499 aa16.4■□□□□ 0.22
UBE4B-206ENST00000466379 NUP98P52948 1817 aa16.4■□□□□ 0.22
UBE4B-206ENST00000466379 IL15P40933 162 aaPredicted RBP16.4■□□□□ 0.22
UBE4B-206ENST00000466379 CRKLP46109 303 aaKnown RBP16.4■□□□□ 0.22
UBE4B-206ENST00000466379 CCDC57Q2TAC2 916 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms