RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 CC2D2BQ6DHV5 1058 aa19.4■□□□□ 0.7
CXCR4-203ENST00000466288 BEGAINQ9BUH8 593 aa19.4■□□□□ 0.7
CXCR4-203ENST00000466288 RSPH6AQ9H0K4 717 aa19.4■□□□□ 0.7
CXCR4-203ENST00000466288 ABCC12Q96J65 1359 aa19.39■□□□□ 0.69
CXCR4-203ENST00000466288 TRAF5O00463 557 aa19.39■□□□□ 0.69
CXCR4-203ENST00000466288 GTF2E1P29083 439 aaPredicted RBP19.39■□□□□ 0.69
CXCR4-203ENST00000466288 PAXIP1Q6ZW49 1069 aaPredicted RBP19.39■□□□□ 0.69
CXCR4-203ENST00000466288 PIAS4Q8N2W9 510 aaPredicted RBP19.39■□□□□ 0.69
CXCR4-203ENST00000466288 TLL2Q9Y6L7 1015 aa19.39■□□□□ 0.69
CXCR4-203ENST00000466288 GRM1Q13255 1194 aa19.38■□□□□ 0.69
CXCR4-203ENST00000466288 USP50Q70EL3 339 aaPredicted RBP19.38■□□□□ 0.69
CXCR4-203ENST00000466288 HOXA10P31260 410 aaPredicted RBP19.37■□□□□ 0.69
CXCR4-203ENST00000466288 MCM10Q7L590 875 aa19.37■□□□□ 0.69
CXCR4-203ENST00000466288 NUTM1Q86Y26 1132 aa19.37■□□□□ 0.69
CXCR4-203ENST00000466288 TSKSQ9UJT2 592 aa19.37■□□□□ 0.69
CXCR4-203ENST00000466288 NPC1L1Q9UHC9 1359 aa19.37■□□□□ 0.69
CXCR4-203ENST00000466288 AOC2O75106 756 aa19.36■□□□□ 0.69
CXCR4-203ENST00000466288 MAP2K2P36507 400 aa19.36■□□□□ 0.69
CXCR4-203ENST00000466288 SLC51AQ86UW1 340 aa19.36■□□□□ 0.69
CXCR4-203ENST00000466288 LARGE2Q8N3Y3 721 aa19.36■□□□□ 0.69
CXCR4-203ENST00000466288 NYXQ9GZU5 481 aa19.36■□□□□ 0.69
CXCR4-203ENST00000466288 GRIPAP1Q4V328 841 aa19.35■□□□□ 0.69
CXCR4-203ENST00000466288 TNRC18O15417 2968 aaPredicted RBP19.34■□□□□ 0.69
CXCR4-203ENST00000466288 CNGB1Q14028 1251 aaPredicted RBP19.34■□□□□ 0.69
CXCR4-203ENST00000466288 DCTN1Q14203 1278 aa19.34■□□□□ 0.69
CXCR4-203ENST00000466288 RTF1Q92541 710 aaKnown RBP19.34■□□□□ 0.69
CXCR4-203ENST00000466288 RPGRQ92834 1020 aaKnown RBP19.34■□□□□ 0.69
CXCR4-203ENST00000466288 PCDH10Q9P2E7 1040 aa19.34■□□□□ 0.69
CXCR4-203ENST00000466288 ERVV-1B6SEH8 477 aa19.33■□□□□ 0.68
CXCR4-203ENST00000466288 SAPCD2Q86UD0 394 aa19.33■□□□□ 0.68
CXCR4-203ENST00000466288 MCOLN1Q9GZU1 580 aa19.33■□□□□ 0.68
CXCR4-203ENST00000466288 RIC1Q4ADV7 1423 aa19.32■□□□□ 0.68
CXCR4-203ENST00000466288 CRAMP1Q96RY5 1269 aa19.32■□□□□ 0.68
CXCR4-203ENST00000466288 ADARB2Q9NS39 739 aaKnown RBP19.32■□□□□ 0.68
CXCR4-203ENST00000466288 GPRC5DQ9NZD1 345 aa19.32■□□□□ 0.68
CXCR4-203ENST00000466288 CA12O43570 354 aa19.31■□□□□ 0.68
CXCR4-203ENST00000466288 NIM1KQ8IY84 436 aa19.31■□□□□ 0.68
CXCR4-203ENST00000466288 MAP3K15Q6ZN16 1313 aa19.31■□□□□ 0.68
CXCR4-203ENST00000466288 UBN2Q6ZU65 1347 aa19.31■□□□□ 0.68
CXCR4-203ENST00000466288 PPEF1O14829 653 aaPredicted RBP19.3■□□□□ 0.68
CXCR4-203ENST00000466288 CELF2O95319 508 aaKnown RBP19.3■□□□□ 0.68
CXCR4-203ENST00000466288 NGEFQ8N5V2 710 aa19.3■□□□□ 0.68
CXCR4-203ENST00000466288 HHIPL1Q96JK4 782 aa19.3■□□□□ 0.68
CXCR4-203ENST00000466288 IBTKQ9P2D0 1353 aaPredicted RBP19.3■□□□□ 0.68
CXCR4-203ENST00000466288 TCERG1O14776 1098 aaKnown RBP19.29■□□□□ 0.68
CXCR4-203ENST00000466288 PPIP5K2O43314 1243 aa19.29■□□□□ 0.68
CXCR4-203ENST00000466288 HTATSF1O43719 755 aaKnown RBP19.29■□□□□ 0.68
CXCR4-203ENST00000466288 BRPF1P55201 1214 aaPredicted RBP19.29■□□□□ 0.68
CXCR4-203ENST00000466288 TAF7Q15545 349 aaPredicted RBP19.29■□□□□ 0.68
CXCR4-203ENST00000466288 SUSD4Q5VX71 490 aa19.29■□□□□ 0.68
CXCR4-203ENST00000466288 TTLL7Q6ZT98 887 aa19.29■□□□□ 0.68
CXCR4-203ENST00000466288 RBM17Q96I25 401 aaKnown RBP19.29■□□□□ 0.68
CXCR4-203ENST00000466288 MIS18AQ9NYP9 233 aa19.29■□□□□ 0.68
CXCR4-203ENST00000466288 CXCL9Q07325 125 aa19.28■□□□□ 0.68
CXCR4-203ENST00000466288 AOC3Q16853 763 aa19.28■□□□□ 0.68
CXCR4-203ENST00000466288 C3orf67Q6ZVT6 689 aa19.28■□□□□ 0.68
CXCR4-203ENST00000466288 PGAP2Q9UHJ9 254 aa19.28■□□□□ 0.68
CXCR4-203ENST00000466288 GPTP24298 496 aa19.28■□□□□ 0.68
CXCR4-203ENST00000466288 CFAP53Q96M91 514 aa19.28■□□□□ 0.68
CXCR4-203ENST00000466288 CFAP44Q96MT7 982 aa19.28■□□□□ 0.68
CXCR4-203ENST00000466288 GLIS2Q9BZE0 524 aaPredicted RBP19.28■□□□□ 0.68
CXCR4-203ENST00000466288 VPS33BQ9H267 617 aa19.28■□□□□ 0.68
CXCR4-203ENST00000466288 TRPM7Q96QT4 1865 aa19.27■□□□□ 0.68
CXCR4-203ENST00000466288 NTSR2O95665 410 aa19.27■□□□□ 0.67
CXCR4-203ENST00000466288 U2AF1L5P0DN76 240 aaPredicted RBP19.27■□□□□ 0.67
CXCR4-203ENST00000466288 U2AF1Q01081 240 aaKnown RBP eCLIP19.27■□□□□ 0.67
CXCR4-203ENST00000466288 ZNRF3Q9ULT6 936 aa19.27■□□□□ 0.67
CXCR4-203ENST00000466288 NUDCQ9Y266 331 aa19.27■□□□□ 0.67
CXCR4-203ENST00000466288 KIF6Q6ZMV9 814 aa19.26■□□□□ 0.67
CXCR4-203ENST00000466288 ZNF34Q8IZ26 560 aa19.26■□□□□ 0.67
CXCR4-203ENST00000466288 ATP6V0A2Q9Y487 856 aa19.26■□□□□ 0.67
CXCR4-203ENST00000466288 GMPSP49915 693 aaPredicted RBP19.25■□□□□ 0.67
CXCR4-203ENST00000466288 HIRAP54198 1017 aaPredicted RBP19.25■□□□□ 0.67
CXCR4-203ENST00000466288 CIAPIN1Q6FI81 312 aa19.25■□□□□ 0.67
CXCR4-203ENST00000466288 RTFDC1Q9BY42 306 aaPredicted RBP19.25■□□□□ 0.67
CXCR4-203ENST00000466288 ZBTB3Q9H5J0 574 aa19.25■□□□□ 0.67
CXCR4-203ENST00000466288 RRP7AQ9Y3A4 280 aaKnown RBP19.25■□□□□ 0.67
CXCR4-203ENST00000466288 DGKZQ13574 1117 aa19.24■□□□□ 0.67
CXCR4-203ENST00000466288 ZC3H15Q8WU90 426 aaKnown RBP19.24■□□□□ 0.67
CXCR4-203ENST00000466288 ZIC5Q96T25 663 aa19.23■□□□□ 0.67
CXCR4-203ENST00000466288 MYL6BP14649 208 aa19.22■□□□□ 0.67
CXCR4-203ENST00000466288 NLRP3Q96P20 1036 aa19.22■□□□□ 0.67
CXCR4-203ENST00000466288 ZNF408Q9H9D4 720 aa19.22■□□□□ 0.67
CXCR4-203ENST00000466288 CDHR2Q9BYE9 1310 aa19.22■□□□□ 0.67
CXCR4-203ENST00000466288 LAMB4A4D0S4 1761 aa19.22■□□□□ 0.67
CXCR4-203ENST00000466288 EIF4A1P60842 406 aaKnown RBP19.22■□□□□ 0.67
CXCR4-203ENST00000466288 GIGYF2Q6Y7W6 1299 aaKnown RBP19.22■□□□□ 0.67
CXCR4-203ENST00000466288 CDC37L1Q7L3B6 337 aa19.22■□□□□ 0.67
CXCR4-203ENST00000466288 SUPT20HQ8NEM7 779 aa19.22■□□□□ 0.67
CXCR4-203ENST00000466288 TRPM4Q8TD43 1214 aa19.22■□□□□ 0.67
CXCR4-203ENST00000466288 TMX4Q9H1E5 349 aaPredicted RBP19.22■□□□□ 0.67
CXCR4-203ENST00000466288 ABCC4O15439 1325 aa19.21■□□□□ 0.67
CXCR4-203ENST00000466288 NUP98P52948 1817 aa19.21■□□□□ 0.67
CXCR4-203ENST00000466288 NOGQ13253 232 aa19.21■□□□□ 0.67
CXCR4-203ENST00000466288 SLC10A5Q5PT55 438 aa19.21■□□□□ 0.67
CXCR4-203ENST00000466288 PPP1R42Q7Z4L9 355 aa19.21■□□□□ 0.67
CXCR4-203ENST00000466288 KIAA2012Q0VF49 1180 aa19.2■□□□□ 0.66
CXCR4-203ENST00000466288 PNISRQ8TF01 805 aaKnown RBP19.2■□□□□ 0.66
CXCR4-203ENST00000466288 CASP8AP2Q9UKL3 1982 aa19.2■□□□□ 0.66
CXCR4-203ENST00000466288 RAD17O75943 681 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms