RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 WDR63Q8IWG1 891 aa13.13□□□□□ -0.31
CD40-204ENST00000466205 CNKSR1Q969H4 720 aa13.13□□□□□ -0.31
CD40-204ENST00000466205 RNF181Q9P0P0 153 aa13.13□□□□□ -0.31
CD40-204ENST00000466205 ADCY9O60503 1353 aa13.12□□□□□ -0.31
CD40-204ENST00000466205 HCLS1P14317 486 aaPredicted RBP13.12□□□□□ -0.31
CD40-204ENST00000466205 NPR1P16066 1061 aa13.12□□□□□ -0.31
CD40-204ENST00000466205 PRELPP51888 382 aa13.12□□□□□ -0.31
CD40-204ENST00000466205 GOLGA2Q08379 1002 aa13.12□□□□□ -0.31
CD40-204ENST00000466205 PARP10Q53GL7 1025 aa13.12□□□□□ -0.31
CD40-204ENST00000466205 SLC51AQ86UW1 340 aa13.12□□□□□ -0.31
CD40-204ENST00000466205 MYD88Q99836 296 aa13.12□□□□□ -0.31
CD40-204ENST00000466205 TRMT112Q9UI30 125 aaKnown RBP13.12□□□□□ -0.31
CD40-204ENST00000466205 PDZRN3Q9UPQ7 1066 aa13.12□□□□□ -0.31
CD40-204ENST00000466205 ARFGEF2Q9Y6D5 1785 aa13.12□□□□□ -0.31
CD40-204ENST00000466205 SLX4Q8IY92 1834 aa13.11□□□□□ -0.31
CD40-204ENST00000466205 NFKBIEO00221 500 aa13.11□□□□□ -0.31
CD40-204ENST00000466205 NCBP3Q53F19 620 aaKnown RBP13.11□□□□□ -0.31
CD40-204ENST00000466205 G2E3Q7L622 706 aa13.11□□□□□ -0.31
CD40-204ENST00000466205 MIER1Q8N108 512 aa13.11□□□□□ -0.31
CD40-204ENST00000466205 RPGRQ92834 1020 aaKnown RBP13.11□□□□□ -0.31
CD40-204ENST00000466205 STK31Q9BXU1 1019 aa13.11□□□□□ -0.31
CD40-204ENST00000466205 GPBP1L1Q9HC44 474 aaPredicted RBP13.11□□□□□ -0.31
CD40-204ENST00000466205 IBTKQ9P2D0 1353 aaPredicted RBP13.1□□□□□ -0.31
CD40-204ENST00000466205 CCER2I3L3R5 266 aa13.1□□□□□ -0.31
CD40-204ENST00000466205 JARID2Q92833 1246 aaPredicted RBP13.1□□□□□ -0.31
CD40-204ENST00000466205 KLRG2A4D1S0 409 aaPredicted RBP13.09□□□□□ -0.31
CD40-204ENST00000466205 SLC4A2P04920 1241 aa13.09□□□□□ -0.31
CD40-204ENST00000466205 FAM89AQ96GI7 184 aa13.09□□□□□ -0.31
CD40-204ENST00000466205 NLRP3Q96P20 1036 aa13.09□□□□□ -0.31
CD40-204ENST00000466205 ISCA1Q9BUE6 129 aa13.09□□□□□ -0.31
CD40-204ENST00000466205 MAP3K2Q9Y2U5 619 aa13.09□□□□□ -0.31
CD40-204ENST00000466205 PI4KAP2A4QPH2 592 aa13.08□□□□□ -0.32
CD40-204ENST00000466205 VAMP4O75379 141 aa13.08□□□□□ -0.32
CD40-204ENST00000466205 CRY2Q49AN0 593 aa13.08□□□□□ -0.32
CD40-204ENST00000466205 PI4KAP1Q8N8J0 262 aa13.08□□□□□ -0.32
CD40-204ENST00000466205 MYH16Q9H6N6 1097 aa13.08□□□□□ -0.32
CD40-204ENST00000466205 SH3TC1Q8TE82 1336 aa13.08□□□□□ -0.32
CD40-204ENST00000466205 DDX58O95786 925 aaKnown RBP13.07□□□□□ -0.32
CD40-204ENST00000466205 LMNB1P20700 586 aa13.07□□□□□ -0.32
CD40-204ENST00000466205 ALDH1B1P30837 517 aa13.07□□□□□ -0.32
CD40-204ENST00000466205 CCDC93Q567U6 631 aa13.07□□□□□ -0.32
CD40-204ENST00000466205 RBM17Q96I25 401 aaKnown RBP13.07□□□□□ -0.32
CD40-204ENST00000466205 TAOK3Q9H2K8 898 aa13.07□□□□□ -0.32
CD40-204ENST00000466205 ZNF521Q96K83 1311 aa13.07□□□□□ -0.32
CD40-204ENST00000466205 PPEF1O14829 653 aaPredicted RBP13.06□□□□□ -0.32
CD40-204ENST00000466205 C7orf43Q8WVR3 580 aa13.06□□□□□ -0.32
CD40-204ENST00000466205 CDCA7LQ96GN5 454 aa13.06□□□□□ -0.32
CD40-204ENST00000466205 METTL22Q9BUU2 404 aaPredicted RBP13.06□□□□□ -0.32
CD40-204ENST00000466205 ABCC4O15439 1325 aa13.06□□□□□ -0.32
CD40-204ENST00000466205 SBF1O95248 1867 aa13.06□□□□□ -0.32
CD40-204ENST00000466205 RIC1Q4ADV7 1423 aa13.05□□□□□ -0.32
CD40-204ENST00000466205 TIAM2Q8IVF5 1701 aa13.05□□□□□ -0.32
CD40-204ENST00000466205 LAMB2P55268 1798 aa13.05□□□□□ -0.32
CD40-204ENST00000466205 FLIIQ13045 1269 aa13.05□□□□□ -0.32
CD40-204ENST00000466205 FKBP5Q13451 457 aaPredicted RBP13.05□□□□□ -0.32
CD40-204ENST00000466205 CWF19L2Q2TBE0 894 aaKnown RBP13.05□□□□□ -0.32
CD40-204ENST00000466205 SLC10A5Q5PT55 438 aa13.05□□□□□ -0.32
CD40-204ENST00000466205 KSR2Q6VAB6 950 aa13.05□□□□□ -0.32
CD40-204ENST00000466205 CCDC85AQ96PX6 553 aaPredicted RBP13.05□□□□□ -0.32
CD40-204ENST00000466205 CHMP4AQ9BY43 222 aa13.05□□□□□ -0.32
CD40-204ENST00000466205 NMRK2Q9NPI5 230 aa13.05□□□□□ -0.32
CD40-204ENST00000466205 ZNF277Q9NRM2 450 aaPredicted RBP13.05□□□□□ -0.32
CD40-204ENST00000466205 FER1L6Q2WGJ9 1857 aa13.05□□□□□ -0.32
CD40-204ENST00000466205 DDX60Q8IY21 1712 aaKnown RBP13.05□□□□□ -0.32
CD40-204ENST00000466205 CCDC88AQ3V6T2 1871 aa13.04□□□□□ -0.32
CD40-204ENST00000466205 IRS4O14654 1257 aaPredicted RBP13.04□□□□□ -0.32
CD40-204ENST00000466205 SOGA3Q5TF21 947 aa13.04□□□□□ -0.32
CD40-204ENST00000466205 CWC25Q9NXE8 425 aaPredicted RBP13.04□□□□□ -0.32
CD40-204ENST00000466205 RNF123Q5XPI4 1314 aa13.04□□□□□ -0.32
CD40-204ENST00000466205 IGKV5-2P06315 115 aa13.03□□□□□ -0.32
CD40-204ENST00000466205 HOXA10P31260 410 aaPredicted RBP13.03□□□□□ -0.32
CD40-204ENST00000466205 FKBP4Q02790 459 aaKnown RBP eCLIP13.03□□□□□ -0.32
CD40-204ENST00000466205 ZBTB38Q8NAP3 1195 aaPredicted RBP13.03□□□□□ -0.32
CD40-204ENST00000466205 CRAMP1Q96RY5 1269 aa13.03□□□□□ -0.32
CD40-204ENST00000466205 COL4A1P02462 1669 aa13.02□□□□□ -0.32
CD40-204ENST00000466205 E9PSI1 815 aa13.02□□□□□ -0.33
CD40-204ENST00000466205 F6X3S4 739 aa13.02□□□□□ -0.33
CD40-204ENST00000466205 KIF3CO14782 793 aa13.02□□□□□ -0.33
CD40-204ENST00000466205 C1QTNF8P60827 252 aa13.02□□□□□ -0.33
CD40-204ENST00000466205 SLFN5Q08AF3 891 aa13.02□□□□□ -0.33
CD40-204ENST00000466205 NEXNQ0ZGT2 675 aa13.02□□□□□ -0.33
CD40-204ENST00000466205 DDX46Q7L014 1031 aaKnown RBP13.02□□□□□ -0.33
CD40-204ENST00000466205 CCDC191Q8NCU4 936 aa13.02□□□□□ -0.33
CD40-204ENST00000466205 RRAGCQ9HB90 399 aa13.02□□□□□ -0.33
CD40-204ENST00000466205 TAF1P21675 1872 aa13.02□□□□□ -0.33
CD40-204ENST00000466205 TRIM28Q13263 835 aaKnown RBP13.01□□□□□ -0.33
CD40-204ENST00000466205 RTKN2Q8IZC4 609 aa13.01□□□□□ -0.33
CD40-204ENST00000466205 CELF1Q92879 486 aaKnown RBP13.01□□□□□ -0.33
CD40-204ENST00000466205 BCL2L13Q9BXK5 485 aa13.01□□□□□ -0.33
CD40-204ENST00000466205 LTBP3Q9NS15 1303 aa13.01□□□□□ -0.33
CD40-204ENST00000466205 KDM2BQ8NHM5 1336 aa13□□□□□ -0.33
CD40-204ENST00000466205 NEURL1BA8MQ27 555 aa13□□□□□ -0.33
CD40-204ENST00000466205 PCCAP05165 728 aaPredicted RBP13□□□□□ -0.33
CD40-204ENST00000466205 IARSP41252 1262 aaKnown RBP13□□□□□ -0.33
CD40-204ENST00000466205 GRAPQ13588 217 aa13□□□□□ -0.33
CD40-204ENST00000466205 GRAPLQ8TC17 118 aaPredicted RBP13□□□□□ -0.33
CD40-204ENST00000466205 DNAAF4Q8WXU2 420 aa13□□□□□ -0.33
CD40-204ENST00000466205 TMX4Q9H1E5 349 aaPredicted RBP13□□□□□ -0.33
CD40-204ENST00000466205 SEC31BQ9NQW1 1179 aa13□□□□□ -0.33
CD40-204ENST00000466205 SNED1Q8TER0 1413 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms