RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 RNF216Q9NWF9 866 aaPredicted RBP9.43□□□□□ -0.9
RPUSD3-212ENST00000466141 CACNA1SQ13698 1873 aa9.42□□□□□ -0.9
RPUSD3-212ENST00000466141 SLX4Q8IY92 1834 aa9.42□□□□□ -0.9
RPUSD3-212ENST00000466141 UBR2Q8IWV8 1755 aa9.42□□□□□ -0.9
RPUSD3-212ENST00000466141 ZNF541Q9H0D2 1346 aa9.42□□□□□ -0.9
RPUSD3-212ENST00000466141 SULT6B1Q6IMI4 303 aa9.42□□□□□ -0.9
RPUSD3-212ENST00000466141 PRR5LQ6MZQ0 368 aa9.42□□□□□ -0.9
RPUSD3-212ENST00000466141 SLC52A2Q9HAB3 445 aa9.42□□□□□ -0.9
RPUSD3-212ENST00000466141 LTBP3Q9NS15 1303 aa9.41□□□□□ -0.9
RPUSD3-212ENST00000466141 DIAPH1O60610 1272 aaKnown RBP9.41□□□□□ -0.9
RPUSD3-212ENST00000466141 MLLT1Q03111 559 aaPredicted RBP9.41□□□□□ -0.9
RPUSD3-212ENST00000466141 MAP1SQ66K74 1059 aaPredicted RBP9.41□□□□□ -0.9
RPUSD3-212ENST00000466141 PRPF40BQ6NWY9 871 aaKnown RBP9.41□□□□□ -0.9
RPUSD3-212ENST00000466141 FAM177A1Q8N128 213 aaPredicted RBP9.41□□□□□ -0.9
RPUSD3-212ENST00000466141 SPOCK2Q92563 424 aa9.41□□□□□ -0.9
RPUSD3-212ENST00000466141 BRIP1Q9BX63 1249 aa9.41□□□□□ -0.9
RPUSD3-212ENST00000466141 SLC24A3Q9HC58 644 aa9.41□□□□□ -0.9
RPUSD3-212ENST00000466141 ADAMTSL1Q8N6G6 1762 aa9.41□□□□□ -0.9
RPUSD3-212ENST00000466141 WDR33Q9C0J8 1336 aaKnown RBP9.4□□□□□ -0.9
RPUSD3-212ENST00000466141 SCN7AQ01118 1682 aa9.4□□□□□ -0.9
RPUSD3-212ENST00000466141 IQCA1LA6NCM1 817 aa9.4□□□□□ -0.9
RPUSD3-212ENST00000466141 RASSF10A6NK89 507 aa9.4□□□□□ -0.9
RPUSD3-212ENST00000466141 PDE6BP35913 854 aa9.4□□□□□ -0.9
RPUSD3-212ENST00000466141 FMR1Q06787 632 aaKnown RBP eCLIP9.4□□□□□ -0.9
RPUSD3-212ENST00000466141 OLFM4Q6UX06 510 aa9.4□□□□□ -0.9
RPUSD3-212ENST00000466141 L3MBTL3Q96JM7 780 aaPredicted RBP9.4□□□□□ -0.9
RPUSD3-212ENST00000466141 TSKSQ9UJT2 592 aa9.4□□□□□ -0.9
RPUSD3-212ENST00000466141 CLEC11AQ9Y240 323 aa9.4□□□□□ -0.9
RPUSD3-212ENST00000466141 ZNF330Q9Y3S2 320 aaPredicted RBP9.4□□□□□ -0.9
RPUSD3-212ENST00000466141 SCN4AP35499 1836 aa9.4□□□□□ -0.91
RPUSD3-212ENST00000466141 RNF123Q5XPI4 1314 aa9.39□□□□□ -0.91
RPUSD3-212ENST00000466141 RNMTO43148 476 aaKnown RBP9.39□□□□□ -0.91
RPUSD3-212ENST00000466141 HMOX1P09601 288 aa9.39□□□□□ -0.91
RPUSD3-212ENST00000466141 EIF5P55010 431 aaKnown RBP9.39□□□□□ -0.91
RPUSD3-212ENST00000466141 GRM1Q13255 1194 aa9.39□□□□□ -0.91
RPUSD3-212ENST00000466141 RALBP1Q15311 655 aa9.39□□□□□ -0.91
RPUSD3-212ENST00000466141 DEFB115Q30KQ5 88 aa9.39□□□□□ -0.91
RPUSD3-212ENST00000466141 AKAP4Q5JQC9 854 aa9.39□□□□□ -0.91
RPUSD3-212ENST00000466141 CERS3Q8IU89 383 aa9.39□□□□□ -0.91
RPUSD3-212ENST00000466141 CFAP53Q96M91 514 aa9.39□□□□□ -0.91
RPUSD3-212ENST00000466141 ABT1Q9ULW3 272 aaKnown RBP9.39□□□□□ -0.91
RPUSD3-212ENST00000466141 TBC1D2BQ9UPU7 963 aa9.39□□□□□ -0.91
RPUSD3-212ENST00000466141 MYBBP1AQ9BQG0 1328 aaKnown RBP9.38□□□□□ -0.91
RPUSD3-212ENST00000466141 ARFGEF2Q9Y6D5 1785 aa9.38□□□□□ -0.91
RPUSD3-212ENST00000466141 EPHX2P34913 555 aa9.38□□□□□ -0.91
RPUSD3-212ENST00000466141 CNTROBQ8N137 903 aa9.38□□□□□ -0.91
RPUSD3-212ENST00000466141 CNKSR1Q969H4 720 aa9.38□□□□□ -0.91
RPUSD3-212ENST00000466141 CHMP4BQ9H444 224 aaKnown RBP9.38□□□□□ -0.91
RPUSD3-212ENST00000466141 ZNF277Q9NRM2 450 aaPredicted RBP9.38□□□□□ -0.91
RPUSD3-212ENST00000466141 HACL1Q9UJ83 578 aa9.38□□□□□ -0.91
RPUSD3-212ENST00000466141 SPDYE4A6NLX3 237 aa9.37□□□□□ -0.91
RPUSD3-212ENST00000466141 CLGNO14967 610 aa9.37□□□□□ -0.91
RPUSD3-212ENST00000466141 SRGNP10124 158 aa9.37□□□□□ -0.91
RPUSD3-212ENST00000466141 RGS19P49795 217 aa9.37□□□□□ -0.91
RPUSD3-212ENST00000466141 MAP2K1Q02750 393 aaPredicted RBP9.37□□□□□ -0.91
RPUSD3-212ENST00000466141 STYK1Q6J9G0 422 aa9.37□□□□□ -0.91
RPUSD3-212ENST00000466141 WWC1Q8IX03 1113 aa9.37□□□□□ -0.91
RPUSD3-212ENST00000466141 CNBD1Q8NA66 436 aa9.37□□□□□ -0.91
RPUSD3-212ENST00000466141 C7orf43Q8WVR3 580 aa9.37□□□□□ -0.91
RPUSD3-212ENST00000466141 PRKRIP1Q9H875 184 aaPredicted RBP9.37□□□□□ -0.91
RPUSD3-212ENST00000466141 THSD7BQ9C0I4 1608 aa9.37□□□□□ -0.91
RPUSD3-212ENST00000466141 U2SURPO15042 1029 aaKnown RBP9.36□□□□□ -0.91
RPUSD3-212ENST00000466141 NPHP1O15259 732 aa9.36□□□□□ -0.91
RPUSD3-212ENST00000466141 CYP4F22Q6NT55 531 aa9.36□□□□□ -0.91
RPUSD3-212ENST00000466141 CCDC82Q8N4S0 544 aa9.36□□□□□ -0.91
RPUSD3-212ENST00000466141 ZC3H15Q8WU90 426 aaKnown RBP9.36□□□□□ -0.91
RPUSD3-212ENST00000466141 MASTLQ96GX5 879 aa9.36□□□□□ -0.91
RPUSD3-212ENST00000466141 CAPNS2Q96L46 248 aa9.36□□□□□ -0.91
RPUSD3-212ENST00000466141 PDZRN3Q9UPQ7 1066 aa9.36□□□□□ -0.91
RPUSD3-212ENST00000466141 KDM3BQ7LBC6 1761 aa9.36□□□□□ -0.91
RPUSD3-212ENST00000466141 LTBP1Q14766 1721 aa9.36□□□□□ -0.91
RPUSD3-212ENST00000466141 TNRC18O15417 2968 aaPredicted RBP9.35□□□□□ -0.91
RPUSD3-212ENST00000466141 A0A087WZG4 1122 aa9.35□□□□□ -0.91
RPUSD3-212ENST00000466141 CAMTA2O94983 1202 aa9.35□□□□□ -0.91
RPUSD3-212ENST00000466141 STARD3NLO95772 234 aa9.35□□□□□ -0.91
RPUSD3-212ENST00000466141 ST5P78524 1137 aa9.35□□□□□ -0.91
RPUSD3-212ENST00000466141 FKBP4Q02790 459 aaKnown RBP eCLIP9.35□□□□□ -0.91
RPUSD3-212ENST00000466141 MTHFSDQ2M296 383 aaKnown RBP9.35□□□□□ -0.91
RPUSD3-212ENST00000466141 CCDC93Q567U6 631 aa9.35□□□□□ -0.91
RPUSD3-212ENST00000466141 SOGA3Q5TF21 947 aa9.35□□□□□ -0.91
RPUSD3-212ENST00000466141 TMED8Q6PL24 325 aaPredicted RBP9.35□□□□□ -0.91
RPUSD3-212ENST00000466141 ZNF496Q96IT1 587 aaPredicted RBP9.35□□□□□ -0.91
RPUSD3-212ENST00000466141 SETDB2Q96T68 719 aa9.35□□□□□ -0.91
RPUSD3-212ENST00000466141 DNAJC2Q99543 621 aaKnown RBP9.35□□□□□ -0.91
RPUSD3-212ENST00000466141 GZF1Q9H116 711 aaPredicted RBP9.35□□□□□ -0.91
RPUSD3-212ENST00000466141 DDX21Q9NR30 783 aaKnown RBP eCLIP9.35□□□□□ -0.91
RPUSD3-212ENST00000466141 TRAF5O00463 557 aa9.34□□□□□ -0.91
RPUSD3-212ENST00000466141 MAFGO15525 162 aa9.34□□□□□ -0.91
RPUSD3-212ENST00000466141 RRP9O43818 475 aaKnown RBP9.34□□□□□ -0.91
RPUSD3-212ENST00000466141 AOC2O75106 756 aa9.34□□□□□ -0.91
RPUSD3-212ENST00000466141 A1BGP04217 495 aa9.34□□□□□ -0.91
RPUSD3-212ENST00000466141 PRKAR2BP31323 418 aa9.34□□□□□ -0.91
RPUSD3-212ENST00000466141 PIP4K2AP48426 406 aaPredicted RBP9.34□□□□□ -0.91
RPUSD3-212ENST00000466141 PNMA8AQ86V59 439 aaPredicted RBP9.34□□□□□ -0.91
RPUSD3-212ENST00000466141 GPR101Q96P66 508 aaPredicted RBP9.34□□□□□ -0.91
RPUSD3-212ENST00000466141 MCOLN1Q9GZU1 580 aa9.34□□□□□ -0.91
RPUSD3-212ENST00000466141 NUDCQ9Y266 331 aa9.34□□□□□ -0.91
RPUSD3-212ENST00000466141 COL4A5P29400 1685 aa9.34□□□□□ -0.91
RPUSD3-212ENST00000466141 LAMB4A4D0S4 1761 aa9.34□□□□□ -0.91
RPUSD3-212ENST00000466141 BCORQ6W2J9 1755 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms