RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 E9PSI1 815 aa33.31■■■□□ 2.92
SMC4-206ENST00000465903 RIC3Q7Z5B4 369 aa33.31■■■□□ 2.92
SMC4-206ENST00000465903 TTLL6Q8N841 843 aa33.31■■■□□ 2.92
SMC4-206ENST00000465903 YY1P25490 414 aa33.3■■■□□ 2.92
SMC4-206ENST00000465903 ZNF622Q969S3 477 aaKnown RBP eCLIP33.3■■■□□ 2.92
SMC4-206ENST00000465903 UTP14AQ9BVJ6 771 aaKnown RBP33.3■■■□□ 2.92
SMC4-206ENST00000465903 SLX4Q8IY92 1834 aa33.3■■■□□ 2.92
SMC4-206ENST00000465903 ATP5J2-PTCD1G3V325 749 aa33.28■■■□□ 2.92
SMC4-206ENST00000465903 TRMT2AQ8IZ69 625 aaKnown RBP33.28■■■□□ 2.92
SMC4-206ENST00000465903 MASTLQ96GX5 879 aa33.28■■■□□ 2.92
SMC4-206ENST00000465903 RIC1Q4ADV7 1423 aa33.28■■■□□ 2.92
SMC4-206ENST00000465903 STYK1Q6J9G0 422 aa33.27■■■□□ 2.92
SMC4-206ENST00000465903 SLC10A5Q5PT55 438 aa33.26■■■□□ 2.91
SMC4-206ENST00000465903 LAMB2P55268 1798 aa33.25■■■□□ 2.91
SMC4-206ENST00000465903 DDX58O95786 925 aaKnown RBP33.25■■■□□ 2.91
SMC4-206ENST00000465903 TRIM28Q13263 835 aaKnown RBP33.25■■■□□ 2.91
SMC4-206ENST00000465903 ARHGAP27Q6ZUM4 889 aa33.25■■■□□ 2.91
SMC4-206ENST00000465903 SYNE4Q8N205 404 aa33.25■■■□□ 2.91
SMC4-206ENST00000465903 ZNF428Q96B54 188 aa33.25■■■□□ 2.91
SMC4-206ENST00000465903 KSR2Q6VAB6 950 aa33.24■■■□□ 2.91
SMC4-206ENST00000465903 ADCY9O60503 1353 aa33.23■■■□□ 2.91
SMC4-206ENST00000465903 PI4KAP2A4QPH2 592 aa33.23■■■□□ 2.91
SMC4-206ENST00000465903 NPR1P16066 1061 aa33.23■■■□□ 2.91
SMC4-206ENST00000465903 PI4KAP1Q8N8J0 262 aa33.23■■■□□ 2.91
SMC4-206ENST00000465903 CNKSR1Q969H4 720 aa33.23■■■□□ 2.91
SMC4-206ENST00000465903 MYD88Q99836 296 aa33.23■■■□□ 2.91
SMC4-206ENST00000465903 METTL22Q9BUU2 404 aaPredicted RBP33.23■■■□□ 2.91
SMC4-206ENST00000465903 TRMT112Q9UI30 125 aaKnown RBP33.23■■■□□ 2.91
SMC4-206ENST00000465903 MAP3K2Q9Y2U5 619 aa33.23■■■□□ 2.91
SMC4-206ENST00000465903 RNF123Q5XPI4 1314 aa33.23■■■□□ 2.91
SMC4-206ENST00000465903 SBF1O95248 1867 aa33.22■■■□□ 2.91
SMC4-206ENST00000465903 FLIIQ13045 1269 aa33.22■■■□□ 2.91
SMC4-206ENST00000465903 CRY2Q49AN0 593 aa33.22■■■□□ 2.91
SMC4-206ENST00000465903 C3orf67Q6ZVT6 689 aa33.22■■■□□ 2.91
SMC4-206ENST00000465903 DDX60Q8IY21 1712 aaKnown RBP33.21■■■□□ 2.91
SMC4-206ENST00000465903 SH3TC1Q8TE82 1336 aa33.19■■■□□ 2.9
SMC4-206ENST00000465903 CCDC88AQ3V6T2 1871 aa33.18■■■□□ 2.9
SMC4-206ENST00000465903 FER1L6Q2WGJ9 1857 aa33.18■■■□□ 2.9
SMC4-206ENST00000465903 HCLS1P14317 486 aaPredicted RBP33.17■■■□□ 2.9
SMC4-206ENST00000465903 PRPF40BQ6NWY9 871 aaKnown RBP33.17■■■□□ 2.9
SMC4-206ENST00000465903 NLRP3Q96P20 1036 aa33.17■■■□□ 2.9
SMC4-206ENST00000465903 C21orf2O43822 256 aa33.16■■■□□ 2.9
SMC4-206ENST00000465903 CCDC191Q8NCU4 936 aa33.16■■■□□ 2.9
SMC4-206ENST00000465903 FAM89AQ96GI7 184 aa33.16■■■□□ 2.9
SMC4-206ENST00000465903 IGKV5-2P06315 115 aa33.15■■■□□ 2.9
SMC4-206ENST00000465903 HOXA10P31260 410 aaPredicted RBP33.15■■■□□ 2.9
SMC4-206ENST00000465903 FKBP5Q13451 457 aaPredicted RBP33.15■■■□□ 2.9
SMC4-206ENST00000465903 C7orf43Q8WVR3 580 aa33.15■■■□□ 2.9
SMC4-206ENST00000465903 ZNF219Q9P2Y4 722 aaPredicted RBP33.15■■■□□ 2.9
SMC4-206ENST00000465903 HNRNPUQ00839 825 aaKnown RBP eCLIP33.14■■■□□ 2.9
SMC4-206ENST00000465903 ALDH1B1P30837 517 aa33.13■■■□□ 2.89
SMC4-206ENST00000465903 TAF1P21675 1872 aa33.13■■■□□ 2.89
SMC4-206ENST00000465903 RPGRQ92834 1020 aaKnown RBP33.12■■■□□ 2.89
SMC4-206ENST00000465903 CWC25Q9NXE8 425 aaPredicted RBP33.12■■■□□ 2.89
SMC4-206ENST00000465903 RTL5Q5HYW3 569 aaPredicted RBP33.11■■■□□ 2.89
SMC4-206ENST00000465903 ZBTB38Q8NAP3 1195 aaPredicted RBP33.11■■■□□ 2.89
SMC4-206ENST00000465903 DNAAF4Q8WXU2 420 aa33.11■■■□□ 2.89
SMC4-206ENST00000465903 MRPL50Q8N5N7 158 aaKnown RBP33.1■■■□□ 2.89
SMC4-206ENST00000465903 CRAMP1Q96RY5 1269 aa33.1■■■□□ 2.89
SMC4-206ENST00000465903 NFKBIEO00221 500 aa33.09■■■□□ 2.89
SMC4-206ENST00000465903 PCCAP05165 728 aaPredicted RBP33.09■■■□□ 2.89
SMC4-206ENST00000465903 PRELPP51888 382 aa33.09■■■□□ 2.89
SMC4-206ENST00000465903 RASSF7Q02833 373 aa33.09■■■□□ 2.89
SMC4-206ENST00000465903 RBM17Q96I25 401 aaKnown RBP33.09■■■□□ 2.89
SMC4-206ENST00000465903 NEURL1BA8MQ27 555 aa33.08■■■□□ 2.89
SMC4-206ENST00000465903 IRS4O14654 1257 aaPredicted RBP33.08■■■□□ 2.89
SMC4-206ENST00000465903 NEXNQ0ZGT2 675 aa33.08■■■□□ 2.89
SMC4-206ENST00000465903 CWF19L2Q2TBE0 894 aaKnown RBP33.08■■■□□ 2.89
SMC4-206ENST00000465903 JARID2Q92833 1246 aaPredicted RBP33.08■■■□□ 2.89
SMC4-206ENST00000465903 F6X3S4 739 aa33.07■■■□□ 2.88
SMC4-206ENST00000465903 OLFM4Q6UX06 510 aa33.07■■■□□ 2.88
SMC4-206ENST00000465903 ZNF784Q8NCA9 323 aaPredicted RBP33.07■■■□□ 2.88
SMC4-206ENST00000465903 SSH1Q8WYL5 1049 aa33.07■■■□□ 2.88
SMC4-206ENST00000465903 DICER1Q9UPY3 1922 aaKnown RBP33.05■■■□□ 2.88
SMC4-206ENST00000465903 SF3B3Q15393 1217 aaKnown RBP33.05■■■□□ 2.88
SMC4-206ENST00000465903 C9orf131Q5VYM1 1079 aa33.05■■■□□ 2.88
SMC4-206ENST00000465903 ABCC4O15439 1325 aa33.03■■■□□ 2.88
SMC4-206ENST00000465903 CT47B1P0C2W7 299 aaPredicted RBP33.03■■■□□ 2.88
SMC4-206ENST00000465903 ALDH1L2Q3SY69 923 aa33.03■■■□□ 2.88
SMC4-206ENST00000465903 SOGA3Q5TF21 947 aa33.03■■■□□ 2.88
SMC4-206ENST00000465903 LINS1Q8NG48 757 aa33.03■■■□□ 2.88
SMC4-206ENST00000465903 CCDC93Q567U6 631 aa33.02■■■□□ 2.88
SMC4-206ENST00000465903 MYH3P11055 1940 aa33.02■■■□□ 2.88
SMC4-206ENST00000465903 H7C1W4 665 aa33.01■■■□□ 2.87
SMC4-206ENST00000465903 GCKRQ14397 625 aa33.01■■■□□ 2.87
SMC4-206ENST00000465903 BEND3Q5T5X7 828 aa33.01■■■□□ 2.87
SMC4-206ENST00000465903 SLC51AQ86UW1 340 aa33.01■■■□□ 2.87
SMC4-206ENST00000465903 RNF181Q9P0P0 153 aa33.01■■■□□ 2.87
SMC4-206ENST00000465903 SNED1Q8TER0 1413 aa33.01■■■□□ 2.87
SMC4-206ENST00000465903 CDHR2Q9BYE9 1310 aa33.01■■■□□ 2.87
SMC4-206ENST00000465903 LTBP3Q9NS15 1303 aa33.01■■■□□ 2.87
SMC4-206ENST00000465903 BCL2L13Q9BXK5 485 aa33■■■□□ 2.87
SMC4-206ENST00000465903 LMNB1P20700 586 aa32.99■■■□□ 2.87
SMC4-206ENST00000465903 DDX46Q7L014 1031 aaKnown RBP32.99■■■□□ 2.87
SMC4-206ENST00000465903 PPEF1O14829 653 aaPredicted RBP32.98■■■□□ 2.87
SMC4-206ENST00000465903 PDE8AO60658 829 aa32.98■■■□□ 2.87
SMC4-206ENST00000465903 TAOK3Q9H2K8 898 aa32.98■■■□□ 2.87
SMC4-206ENST00000465903 COL4A1P02462 1669 aa32.97■■■□□ 2.87
SMC4-206ENST00000465903 CASP7P55210 303 aa32.97■■■□□ 2.87
SMC4-206ENST00000465903 ZBED9Q6R2W3 1325 aa32.97■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms