RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 USP3Q9Y6I4 520 aa7.5□□□□□ -1.21
EXOSC3-204ENST00000465860 CLTCQ00610 1675 aaKnown RBP7.49□□□□□ -1.21
EXOSC3-204ENST00000465860 POM121CA8CG34 1229 aa7.49□□□□□ -1.21
EXOSC3-204ENST00000465860 RAD21O60216 631 aa7.49□□□□□ -1.21
EXOSC3-204ENST00000465860 ATP4AP20648 1035 aa7.49□□□□□ -1.21
EXOSC3-204ENST00000465860 MAP2K3P46734 347 aa7.49□□□□□ -1.21
EXOSC3-204ENST00000465860 FLIIQ13045 1269 aa7.49□□□□□ -1.21
EXOSC3-204ENST00000465860 MTFR1Q15390 333 aa7.49□□□□□ -1.21
EXOSC3-204ENST00000465860 WWC1Q8IX03 1113 aa7.49□□□□□ -1.21
EXOSC3-204ENST00000465860 ADAMTS19Q8TE59 1207 aa7.49□□□□□ -1.21
EXOSC3-204ENST00000465860 ABHD17AQ96GS6 310 aa7.49□□□□□ -1.21
EXOSC3-204ENST00000465860 OXCT2Q9BYC2 517 aaPredicted RBP7.49□□□□□ -1.21
EXOSC3-204ENST00000465860 NIFKQ9BYG3 293 aaKnown RBP7.49□□□□□ -1.21
EXOSC3-204ENST00000465860 NDFIP2Q9NV92 336 aa7.49□□□□□ -1.21
EXOSC3-204ENST00000465860 IQSEC3Q9UPP2 1182 aaPredicted RBP7.49□□□□□ -1.21
EXOSC3-204ENST00000465860 A2MP01023 1474 aa7.49□□□□□ -1.21
EXOSC3-204ENST00000465860 A6NJY4 79 aa7.48□□□□□ -1.21
EXOSC3-204ENST00000465860 RTEL1-TNFRSF6BF6WH68 1400 aa7.48□□□□□ -1.21
EXOSC3-204ENST00000465860 BNIP3LO60238 219 aa7.48□□□□□ -1.21
EXOSC3-204ENST00000465860 NCOA4Q13772 614 aa7.48□□□□□ -1.21
EXOSC3-204ENST00000465860 KANK3Q6NY19 840 aa7.48□□□□□ -1.21
EXOSC3-204ENST00000465860 FGD6Q6ZV73 1430 aa7.48□□□□□ -1.21
EXOSC3-204ENST00000465860 NFATC2IPQ8NCF5 419 aa7.48□□□□□ -1.21
EXOSC3-204ENST00000465860 NEDD1Q8NHV4 660 aa7.48□□□□□ -1.21
EXOSC3-204ENST00000465860 AIDAQ96BJ3 306 aa7.48□□□□□ -1.21
EXOSC3-204ENST00000465860 KLRG1Q96E93 195 aa7.48□□□□□ -1.21
EXOSC3-204ENST00000465860 MIA2Q96PC5 1412 aa7.48□□□□□ -1.21
EXOSC3-204ENST00000465860 ATXN7L1Q9ULK2 861 aaPredicted RBP7.48□□□□□ -1.21
EXOSC3-204ENST00000465860 NOD1Q9Y239 953 aa7.48□□□□□ -1.21
EXOSC3-204ENST00000465860 MAST1Q9Y2H9 1570 aa7.48□□□□□ -1.21
EXOSC3-204ENST00000465860 DNMT1P26358 1616 aaKnown RBP7.48□□□□□ -1.21
EXOSC3-204ENST00000465860 TCOF1Q13428 1488 aaKnown RBP7.48□□□□□ -1.21
EXOSC3-204ENST00000465860 LMTK3Q96Q04 1460 aa7.48□□□□□ -1.21
EXOSC3-204ENST00000465860 CNTNAP5Q8WYK1 1306 aa7.48□□□□□ -1.21
EXOSC3-204ENST00000465860 CDK2AP1O14519 115 aa7.47□□□□□ -1.21
EXOSC3-204ENST00000465860 OIP5O43482 229 aa7.47□□□□□ -1.21
EXOSC3-204ENST00000465860 LZTS3O60299 673 aaPredicted RBP7.47□□□□□ -1.21
EXOSC3-204ENST00000465860 GTF2IP78347 998 aa7.47□□□□□ -1.21
EXOSC3-204ENST00000465860 DEPDC4Q8N2C3 294 aa7.47□□□□□ -1.21
EXOSC3-204ENST00000465860 LRRC4BQ9NT99 713 aa7.47□□□□□ -1.21
EXOSC3-204ENST00000465860 DNAAF2Q9NVR5 837 aaKnown RBP7.47□□□□□ -1.21
EXOSC3-204ENST00000465860 ABCC5O15440 1437 aa7.46□□□□□ -1.21
EXOSC3-204ENST00000465860 USP17L5A8MUK1 530 aa7.46□□□□□ -1.22
EXOSC3-204ENST00000465860 C2CD2LO14523 706 aa7.46□□□□□ -1.22
EXOSC3-204ENST00000465860 C1orf229Q6ZS94 237 aaPredicted RBP7.46□□□□□ -1.22
EXOSC3-204ENST00000465860 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.46□□□□□ -1.22
EXOSC3-204ENST00000465860 C1orf216Q8TAB5 229 aa7.46□□□□□ -1.22
EXOSC3-204ENST00000465860 ZCCHC2Q9C0B9 1178 aaKnown RBP7.46□□□□□ -1.22
EXOSC3-204ENST00000465860 DNMT3AQ9Y6K1 912 aaPredicted RBP7.46□□□□□ -1.22
EXOSC3-204ENST00000465860 MROH2AA6NES4 1674 aa7.46□□□□□ -1.22
EXOSC3-204ENST00000465860 DHX29Q7Z478 1369 aaKnown RBP7.46□□□□□ -1.22
EXOSC3-204ENST00000465860 MROH1Q8NDA8 1641 aa7.45□□□□□ -1.22
EXOSC3-204ENST00000465860 PREX1Q8TCU6 1659 aa7.45□□□□□ -1.22
EXOSC3-204ENST00000465860 SHISA8B8ZZ34 492 aa7.45□□□□□ -1.22
EXOSC3-204ENST00000465860 FGFR3P22607 806 aa7.45□□□□□ -1.22
EXOSC3-204ENST00000465860 CTBSQ01459 385 aa7.45□□□□□ -1.22
EXOSC3-204ENST00000465860 ZNF358Q9NW07 568 aa7.45□□□□□ -1.22
EXOSC3-204ENST00000465860 CABP1Q9NZU7 370 aa7.45□□□□□ -1.22
EXOSC3-204ENST00000465860 DAPK1P53355 1430 aa7.44□□□□□ -1.22
EXOSC3-204ENST00000465860 PTPRKQ15262 1439 aa7.44□□□□□ -1.22
EXOSC3-204ENST00000465860 BACH1O14867 736 aa7.44□□□□□ -1.22
EXOSC3-204ENST00000465860 BMP4P12644 408 aa7.44□□□□□ -1.22
EXOSC3-204ENST00000465860 HSPA2P54652 639 aa7.44□□□□□ -1.22
EXOSC3-204ENST00000465860 PSME1Q06323 249 aa7.44□□□□□ -1.22
EXOSC3-204ENST00000465860 HDGFL1Q5TGJ6 251 aa7.44□□□□□ -1.22
EXOSC3-204ENST00000465860 FIGNL1Q6PIW4 674 aa7.44□□□□□ -1.22
EXOSC3-204ENST00000465860 NLRP8Q86W28 1048 aa7.44□□□□□ -1.22
EXOSC3-204ENST00000465860 BEND7Q8N7W2 519 aaPredicted RBP7.44□□□□□ -1.22
EXOSC3-204ENST00000465860 GALNT6Q8NCL4 622 aa7.44□□□□□ -1.22
EXOSC3-204ENST00000465860 UCN2Q96RP3 112 aa7.44□□□□□ -1.22
EXOSC3-204ENST00000465860 HCN2Q9UL51 889 aa7.44□□□□□ -1.22
EXOSC3-204ENST00000465860 PCDHGC4Q9Y5F7 938 aa7.44□□□□□ -1.22
EXOSC3-204ENST00000465860 PARP3Q9Y6F1 533 aa7.44□□□□□ -1.22
EXOSC3-204ENST00000465860 RNF17Q9BXT8 1623 aaKnown RBP7.44□□□□□ -1.22
EXOSC3-204ENST00000465860 CFAP65Q6ZU64 1925 aaKnown RBP7.44□□□□□ -1.22
EXOSC3-204ENST00000465860 CEP152O94986 1710 aa7.44□□□□□ -1.22
EXOSC3-204ENST00000465860 SETD1BQ9UPS6 1966 aaKnown RBP7.43□□□□□ -1.22
EXOSC3-204ENST00000465860 A0A1W2PNR3 127 aa7.43□□□□□ -1.22
EXOSC3-204ENST00000465860 PHF20L1A8MW92 1017 aa7.43□□□□□ -1.22
EXOSC3-204ENST00000465860 NBPF1Q3BBV0 1214 aa7.43□□□□□ -1.22
EXOSC3-204ENST00000465860 ARSJQ5FYB0 599 aaPredicted RBP7.43□□□□□ -1.22
EXOSC3-204ENST00000465860 GGT6Q6P531 493 aa7.43□□□□□ -1.22
EXOSC3-204ENST00000465860 ZIC5Q96T25 663 aa7.43□□□□□ -1.22
EXOSC3-204ENST00000465860 ZDHHC3Q9NYG2 299 aa7.43□□□□□ -1.22
EXOSC3-204ENST00000465860 SCHIP1Q9P0W5 487 aaPredicted RBP7.43□□□□□ -1.22
EXOSC3-204ENST00000465860 GDF2Q9UK05 429 aaPredicted RBP7.43□□□□□ -1.22
EXOSC3-204ENST00000465860 STRCQ7RTU9 1775 aa7.43□□□□□ -1.22
EXOSC3-204ENST00000465860 SHANK2Q9UPX8 1470 aa7.43□□□□□ -1.22
EXOSC3-204ENST00000465860 EIF2AK4Q9P2K8 1649 aaKnown RBP7.42□□□□□ -1.22
EXOSC3-204ENST00000465860 KIF3BO15066 747 aa7.42□□□□□ -1.22
EXOSC3-204ENST00000465860 ATXN7O15265 892 aaPredicted RBP7.42□□□□□ -1.22
EXOSC3-204ENST00000465860 TSPY4P0CV99 314 aa7.42□□□□□ -1.22
EXOSC3-204ENST00000465860 TSPY10P0CW01 314 aa7.42□□□□□ -1.22
EXOSC3-204ENST00000465860 EPHA4P54764 986 aa7.42□□□□□ -1.22
EXOSC3-204ENST00000465860 SNRPNP63162 240 aaKnown RBP7.42□□□□□ -1.22
EXOSC3-204ENST00000465860 PODNQ7Z5L7 613 aa7.42□□□□□ -1.22
EXOSC3-204ENST00000465860 ZDHHC1Q8WTX9 485 aa7.42□□□□□ -1.22
EXOSC3-204ENST00000465860 EDARADDQ8WWZ3 215 aa7.42□□□□□ -1.22
EXOSC3-204ENST00000465860 KIAA1024Q9UPX6 916 aa7.42□□□□□ -1.22
EXOSC3-204ENST00000465860 USP17L3A6NCW0 530 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms