RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 SSH1Q8WYL5 1049 aa15.83■□□□□ 0.12
CHPF2-202ENST00000465601 METTL22Q9BUU2 404 aaPredicted RBP15.83■□□□□ 0.12
CHPF2-202ENST00000465601 ADCY9O60503 1353 aa15.83■□□□□ 0.12
CHPF2-202ENST00000465601 TRIM28Q13263 835 aaKnown RBP15.82■□□□□ 0.12
CHPF2-202ENST00000465601 SYNE4Q8N205 404 aa15.82■□□□□ 0.12
CHPF2-202ENST00000465601 MRPL50Q8N5N7 158 aaKnown RBP15.82■□□□□ 0.12
CHPF2-202ENST00000465601 PIM2Q9P1W9 311 aa15.82■□□□□ 0.12
CHPF2-202ENST00000465601 TRMT112Q9UI30 125 aaKnown RBP15.82■□□□□ 0.12
CHPF2-202ENST00000465601 BRCA1P38398 1863 aaKnown RBP15.82■□□□□ 0.12
CHPF2-202ENST00000465601 ZNF622Q969S3 477 aaKnown RBP eCLIP15.81■□□□□ 0.12
CHPF2-202ENST00000465601 ABCC12Q96J65 1359 aa15.81■□□□□ 0.12
CHPF2-202ENST00000465601 BCL2L13Q9BXK5 485 aa15.81■□□□□ 0.12
CHPF2-202ENST00000465601 IBTKQ9P2D0 1353 aaPredicted RBP15.81■□□□□ 0.12
CHPF2-202ENST00000465601 BCS1LQ9Y276 419 aa15.81■□□□□ 0.12
CHPF2-202ENST00000465601 CT47B1P0C2W7 299 aaPredicted RBP15.8■□□□□ 0.12
CHPF2-202ENST00000465601 DNAAF4Q8WXU2 420 aa15.8■□□□□ 0.12
CHPF2-202ENST00000465601 PDZRN3Q9UPQ7 1066 aa15.8■□□□□ 0.12
CHPF2-202ENST00000465601 KLRG2A4D1S0 409 aaPredicted RBP15.79■□□□□ 0.12
CHPF2-202ENST00000465601 F6X3S4 739 aa15.79■□□□□ 0.12
CHPF2-202ENST00000465601 IGKV5-2P06315 115 aa15.79■□□□□ 0.12
CHPF2-202ENST00000465601 SRGNP10124 158 aa15.79■□□□□ 0.12
CHPF2-202ENST00000465601 HCLS1P14317 486 aaPredicted RBP15.79■□□□□ 0.12
CHPF2-202ENST00000465601 NEXNQ0ZGT2 675 aa15.79■□□□□ 0.12
CHPF2-202ENST00000465601 ALDH1L2Q3SY69 923 aa15.79■□□□□ 0.12
CHPF2-202ENST00000465601 DALRD3Q5D0E6 543 aaKnown RBP15.79■□□□□ 0.12
CHPF2-202ENST00000465601 RTL5Q5HYW3 569 aaPredicted RBP15.79■□□□□ 0.12
CHPF2-202ENST00000465601 SLC10A5Q5PT55 438 aa15.79■□□□□ 0.12
CHPF2-202ENST00000465601 FAM89AQ96GI7 184 aa15.79■□□□□ 0.12
CHPF2-202ENST00000465601 COL11A2P13942 1736 aaPredicted RBP15.79■□□□□ 0.12
CHPF2-202ENST00000465601 DLEC1Q9Y238 1755 aa15.78■□□□□ 0.12
CHPF2-202ENST00000465601 SH3TC1Q8TE82 1336 aa15.78■□□□□ 0.12
CHPF2-202ENST00000465601 CWF19L2Q2TBE0 894 aaKnown RBP15.78■□□□□ 0.12
CHPF2-202ENST00000465601 C3orf67Q6ZVT6 689 aa15.78■□□□□ 0.12
CHPF2-202ENST00000465601 TTLL6Q8N841 843 aa15.78■□□□□ 0.12
CHPF2-202ENST00000465601 CCDC191Q8NCU4 936 aa15.78■□□□□ 0.12
CHPF2-202ENST00000465601 JARID2Q92833 1246 aaPredicted RBP15.78■□□□□ 0.12
CHPF2-202ENST00000465601 MASTLQ96GX5 879 aa15.78■□□□□ 0.12
CHPF2-202ENST00000465601 SMC4Q9NTJ3 1288 aa15.78■□□□□ 0.12
CHPF2-202ENST00000465601 CWC25Q9NXE8 425 aaPredicted RBP15.78■□□□□ 0.12
CHPF2-202ENST00000465601 TNRC6CQ9HCJ0 1690 aaKnown RBP15.77■□□□□ 0.12
CHPF2-202ENST00000465601 RNF123Q5XPI4 1314 aa15.77■□□□□ 0.12
CHPF2-202ENST00000465601 GRIN3BO60391 1043 aa15.77■□□□□ 0.12
CHPF2-202ENST00000465601 RARSP54136 660 aaKnown RBP15.77■□□□□ 0.12
CHPF2-202ENST00000465601 STYK1Q6J9G0 422 aa15.77■□□□□ 0.12
CHPF2-202ENST00000465601 NLRP3Q96P20 1036 aa15.77■□□□□ 0.12
CHPF2-202ENST00000465601 CACNA1SQ13698 1873 aa15.77■□□□□ 0.11
CHPF2-202ENST00000465601 SLX4Q8IY92 1834 aa15.76■□□□□ 0.11
CHPF2-202ENST00000465601 ARFGEF1Q9Y6D6 1849 aa15.76■□□□□ 0.11
CHPF2-202ENST00000465601 NEURL1BA8MQ27 555 aa15.76■□□□□ 0.11
CHPF2-202ENST00000465601 NPR1P16066 1061 aa15.76■□□□□ 0.11
CHPF2-202ENST00000465601 ZBTB38Q8NAP3 1195 aaPredicted RBP15.76■□□□□ 0.11
CHPF2-202ENST00000465601 CHD4Q14839 1912 aa15.76■□□□□ 0.11
CHPF2-202ENST00000465601 IRS4O14654 1257 aaPredicted RBP15.75■□□□□ 0.11
CHPF2-202ENST00000465601 PCCAP05165 728 aaPredicted RBP15.75■□□□□ 0.11
CHPF2-202ENST00000465601 CRY2Q49AN0 593 aa15.75■□□□□ 0.11
CHPF2-202ENST00000465601 SLC4A10Q6U841 1118 aa15.75■□□□□ 0.11
CHPF2-202ENST00000465601 LINS1Q8NG48 757 aa15.75■□□□□ 0.11
CHPF2-202ENST00000465601 CNKSR1Q969H4 720 aa15.75■□□□□ 0.11
CHPF2-202ENST00000465601 ZNF219Q9P2Y4 722 aaPredicted RBP15.75■□□□□ 0.11
CHPF2-202ENST00000465601 BEND3Q5T5X7 828 aa15.74■□□□□ 0.11
CHPF2-202ENST00000465601 ARHGAP27Q6ZUM4 889 aa15.74■□□□□ 0.11
CHPF2-202ENST00000465601 RPGRQ92834 1020 aaKnown RBP15.74■□□□□ 0.11
CHPF2-202ENST00000465601 NOB1Q9ULX3 412 aaKnown RBP15.74■□□□□ 0.11
CHPF2-202ENST00000465601 RIC1Q4ADV7 1423 aa15.74■□□□□ 0.11
CHPF2-202ENST00000465601 LAMB2P55268 1798 aa15.74■□□□□ 0.11
CHPF2-202ENST00000465601 DDX60Q8IY21 1712 aaKnown RBP15.74■□□□□ 0.11
CHPF2-202ENST00000465601 PTPRCP08575 1304 aa15.73■□□□□ 0.11
CHPF2-202ENST00000465601 GCKRQ14397 625 aa15.73■□□□□ 0.11
CHPF2-202ENST00000465601 PRPF40BQ6NWY9 871 aaKnown RBP15.73■□□□□ 0.11
CHPF2-202ENST00000465601 YTHDC1Q96MU7 727 aaKnown RBP15.73■□□□□ 0.11
CHPF2-202ENST00000465601 TAF1P21675 1872 aa15.73■□□□□ 0.11
CHPF2-202ENST00000465601 C21orf2O43822 256 aa15.72■□□□□ 0.11
CHPF2-202ENST00000465601 BCAR3O75815 825 aa15.72■□□□□ 0.11
CHPF2-202ENST00000465601 ALDH1B1P30837 517 aa15.72■□□□□ 0.11
CHPF2-202ENST00000465601 HOXA10P31260 410 aaPredicted RBP15.72■□□□□ 0.11
CHPF2-202ENST00000465601 BRPF1P55201 1214 aaPredicted RBP15.72■□□□□ 0.11
CHPF2-202ENST00000465601 RBM17Q96I25 401 aaKnown RBP15.72■□□□□ 0.11
CHPF2-202ENST00000465601 H7C1W4 665 aa15.71■□□□□ 0.11
CHPF2-202ENST00000465601 UBE3BQ7Z3V4 1068 aa15.71■□□□□ 0.11
CHPF2-202ENST00000465601 SF3B3Q15393 1217 aaKnown RBP15.7■□□□□ 0.1
CHPF2-202ENST00000465601 CRAMP1Q96RY5 1269 aa15.7■□□□□ 0.1
CHPF2-202ENST00000465601 SRCIN1Q9C0H9 1055 aa15.7■□□□□ 0.1
CHPF2-202ENST00000465601 CDHR2Q9BYE9 1310 aa15.69■□□□□ 0.1
CHPF2-202ENST00000465601 PDE8AO60658 829 aa15.69■□□□□ 0.1
CHPF2-202ENST00000465601 ALDH1L1O75891 902 aa15.69■□□□□ 0.1
CHPF2-202ENST00000465601 HSP90B1P14625 803 aaKnown RBP15.69■□□□□ 0.1
CHPF2-202ENST00000465601 DDX46Q7L014 1031 aaKnown RBP15.69■□□□□ 0.1
CHPF2-202ENST00000465601 C7orf43Q8WVR3 580 aa15.69■□□□□ 0.1
CHPF2-202ENST00000465601 CCDC88AQ3V6T2 1871 aa15.69■□□□□ 0.1
CHPF2-202ENST00000465601 MYH3P11055 1940 aa15.68■□□□□ 0.1
CHPF2-202ENST00000465601 CASP7P55210 303 aa15.68■□□□□ 0.1
CHPF2-202ENST00000465601 OLFM4Q6UX06 510 aa15.68■□□□□ 0.1
CHPF2-202ENST00000465601 FRAT1Q92837 279 aaPredicted RBP15.68■□□□□ 0.1
CHPF2-202ENST00000465601 CCDC85AQ96PX6 553 aaPredicted RBP15.68■□□□□ 0.1
CHPF2-202ENST00000465601 API5Q9BZZ5 524 aaKnown RBP15.68■□□□□ 0.1
CHPF2-202ENST00000465601 ABCC4O15439 1325 aa15.68■□□□□ 0.1
CHPF2-202ENST00000465601 SBF1O95248 1867 aa15.67■□□□□ 0.1
CHPF2-202ENST00000465601 C9orf78Q9NZ63 289 aaPredicted RBP15.67■□□□□ 0.1
CHPF2-202ENST00000465601 KIF16BQ96L93 1317 aa15.67■□□□□ 0.1
CHPF2-202ENST00000465601 FER1L6Q2WGJ9 1857 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms