RNA–Protein interactions for RNA: ENST00000465301.2

RTL9-201, Transcript of retrotransposon Gag like 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTL9, Length 5,426 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9-201ENST00000465301 LMBR1Q8WVP7 490 aa9.4□□□□□ -0.9
RTL9-201ENST00000465301 HMG20BQ9P0W2 317 aa9.4□□□□□ -0.9
RTL9-201ENST00000465301 DBF4Q9UBU7 674 aaPredicted RBP9.4□□□□□ -0.9
RTL9-201ENST00000465301 C9orf84Q5VXU9 1444 aa9.4□□□□□ -0.9
RTL9-201ENST00000465301 A0A1W2PRG0 241 aa9.4□□□□□ -0.9
RTL9-201ENST00000465301 TTC14Q96N46 770 aa9.4□□□□□ -0.9
RTL9-201ENST00000465301 CTAGE1Q96RT6 745 aa9.4□□□□□ -0.9
RTL9-201ENST00000465301 KRT23Q9C075 422 aa9.4□□□□□ -0.9
RTL9-201ENST00000465301 RBM27Q9P2N5 1060 aaKnown RBP9.4□□□□□ -0.9
RTL9-201ENST00000465301 CLEC11AQ9Y240 323 aa9.4□□□□□ -0.9
RTL9-201ENST00000465301 KIAA1107Q9UPP5 1409 aa9.4□□□□□ -0.91
RTL9-201ENST00000465301 GAS8O95995 478 aa9.4□□□□□ -0.91
RTL9-201ENST00000465301 PRPF4BQ13523 1007 aaKnown RBP9.4□□□□□ -0.91
RTL9-201ENST00000465301 STX1AQ16623 288 aa9.4□□□□□ -0.91
RTL9-201ENST00000465301 SMARCC1Q92922 1105 aaPredicted RBP9.4□□□□□ -0.91
RTL9-201ENST00000465301 SLC12A5Q9H2X9 1139 aa9.4□□□□□ -0.91
RTL9-201ENST00000465301 ODF2LQ9ULJ1 636 aa9.4□□□□□ -0.91
RTL9-201ENST00000465301 TMEM67Q5HYA8 995 aa9.39□□□□□ -0.91
RTL9-201ENST00000465301 RNF187Q5TA31 235 aaPredicted RBP9.39□□□□□ -0.91
RTL9-201ENST00000465301 CWC25Q9NXE8 425 aaPredicted RBP9.39□□□□□ -0.91
RTL9-201ENST00000465301 URI1O94763 535 aaPredicted RBP9.39□□□□□ -0.91
RTL9-201ENST00000465301 MAP7D1Q3KQU3 841 aa9.39□□□□□ -0.91
RTL9-201ENST00000465301 DAAM2Q86T65 1068 aa9.39□□□□□ -0.91
RTL9-201ENST00000465301 FBF1Q8TES7 1133 aa9.39□□□□□ -0.91
RTL9-201ENST00000465301 DNAAF4Q8WXU2 420 aa9.39□□□□□ -0.91
RTL9-201ENST00000465301 NAP1L4Q99733 375 aaKnown RBP9.39□□□□□ -0.91
RTL9-201ENST00000465301 EPRSP07814 1512 aaKnown RBP9.39□□□□□ -0.91
RTL9-201ENST00000465301 SPAG1Q07617 926 aa9.39□□□□□ -0.91
RTL9-201ENST00000465301 TNNT1P13805 278 aa9.39□□□□□ -0.91
RTL9-201ENST00000465301 NCOA7Q8NI08 942 aa9.39□□□□□ -0.91
RTL9-201ENST00000465301 CNNM2Q9H8M5 875 aa9.39□□□□□ -0.91
RTL9-201ENST00000465301 ATP2A2P16615 1042 aaKnown RBP9.38□□□□□ -0.91
RTL9-201ENST00000465301 NBPF8Q3BBV2 869 aa9.38□□□□□ -0.91
RTL9-201ENST00000465301 NBPF14Q5TI25 921 aa9.38□□□□□ -0.91
RTL9-201ENST00000465301 MPRIPQ6WCQ1 1025 aa9.38□□□□□ -0.91
RTL9-201ENST00000465301 MAATS1Q7Z4T9 603 aa9.38□□□□□ -0.91
RTL9-201ENST00000465301 TIGD1Q96MW7 591 aa9.38□□□□□ -0.91
RTL9-201ENST00000465301 PTPRCP08575 1304 aa9.38□□□□□ -0.91
RTL9-201ENST00000465301 HSF2BPO75031 334 aa9.38□□□□□ -0.91
RTL9-201ENST00000465301 CTR9Q6PD62 1173 aa9.38□□□□□ -0.91
RTL9-201ENST00000465301 GABPB2Q8TAK5 448 aaPredicted RBP9.38□□□□□ -0.91
RTL9-201ENST00000465301 BOLA2Q9H3K6 86 aa9.38□□□□□ -0.91
RTL9-201ENST00000465301 C6orf50Q9HD87 102 aa9.38□□□□□ -0.91
RTL9-201ENST00000465301 MKRN1Q9UHC7 482 aaKnown RBP9.38□□□□□ -0.91
RTL9-201ENST00000465301 LIMCH1Q9UPQ0 1083 aa9.38□□□□□ -0.91
RTL9-201ENST00000465301 CEP83Q9Y592 693 aa9.38□□□□□ -0.91
RTL9-201ENST00000465301 TTC21BQ7Z4L5 1316 aa9.38□□□□□ -0.91
RTL9-201ENST00000465301 RRS1Q15050 365 aaKnown RBP9.38□□□□□ -0.91
RTL9-201ENST00000465301 IFNL2Q8IZJ0 200 aa9.38□□□□□ -0.91
RTL9-201ENST00000465301 SMC6Q96SB8 1091 aa9.38□□□□□ -0.91
RTL9-201ENST00000465301 ZNF219Q9P2Y4 722 aaPredicted RBP9.38□□□□□ -0.91
RTL9-201ENST00000465301 ZFYP08048 801 aaPredicted RBP9.38□□□□□ -0.91
RTL9-201ENST00000465301 PLCG2P16885 1265 aa9.38□□□□□ -0.91
RTL9-201ENST00000465301 RFX1P22670 979 aa9.38□□□□□ -0.91
RTL9-201ENST00000465301 ALDH3A1P30838 453 aa9.38□□□□□ -0.91
RTL9-201ENST00000465301 CYLC1P35663 651 aaPredicted RBP9.38□□□□□ -0.91
RTL9-201ENST00000465301 HAUS2Q9NVX0 235 aa9.38□□□□□ -0.91
RTL9-201ENST00000465301 PHF8Q9UPP1 1060 aa9.38□□□□□ -0.91
RTL9-201ENST00000465301 EHBP1L1Q8N3D4 1523 aa9.38□□□□□ -0.91
RTL9-201ENST00000465301 WIZO95785 1651 aa9.38□□□□□ -0.91
RTL9-201ENST00000465301 LRRC9Q6ZRR7 1453 aa9.38□□□□□ -0.91
RTL9-201ENST00000465301 SH3BP5O60239 455 aa9.38□□□□□ -0.91
RTL9-201ENST00000465301 NOL3O60936 208 aaKnown RBP9.38□□□□□ -0.91
RTL9-201ENST00000465301 ADAMTS2O95450 1211 aa9.38□□□□□ -0.91
RTL9-201ENST00000465301 ZNF804AQ7Z570 1209 aa9.38□□□□□ -0.91
RTL9-201ENST00000465301 WDR70Q9NW82 654 aa9.38□□□□□ -0.91
RTL9-201ENST00000465301 ZNF644Q9H582 1327 aaPredicted RBP9.37□□□□□ -0.91
RTL9-201ENST00000465301 ERICH3Q5RHP9 1530 aa9.37□□□□□ -0.91
RTL9-201ENST00000465301 GMNNO75496 209 aa9.37□□□□□ -0.91
RTL9-201ENST00000465301 VIMP08670 466 aaKnown RBP9.37□□□□□ -0.91
RTL9-201ENST00000465301 TSPY3P0CV98 308 aa9.37□□□□□ -0.91
RTL9-201ENST00000465301 TSPY8P0CW00 308 aa9.37□□□□□ -0.91
RTL9-201ENST00000465301 TNPO1Q92973 898 aaKnown RBP9.37□□□□□ -0.91
RTL9-201ENST00000465301 SPAG5Q96R06 1193 aa9.37□□□□□ -0.91
RTL9-201ENST00000465301 NYXQ9GZU5 481 aa9.37□□□□□ -0.91
RTL9-201ENST00000465301 LMOD1P29536 600 aaPredicted RBP9.37□□□□□ -0.91
RTL9-201ENST00000465301 METAP2P50579 478 aaKnown RBP eCLIP9.37□□□□□ -0.91
RTL9-201ENST00000465301 BRDTQ58F21 947 aaPredicted RBP9.37□□□□□ -0.91
RTL9-201ENST00000465301 NBPF6Q5VWK0 638 aa9.37□□□□□ -0.91
RTL9-201ENST00000465301 CCDC102BQ68D86 513 aa9.37□□□□□ -0.91
RTL9-201ENST00000465301 NBPF5PQ86XG9 351 aaPredicted RBP9.37□□□□□ -0.91
RTL9-201ENST00000465301 PLCD3Q8N3E9 789 aa9.37□□□□□ -0.91
RTL9-201ENST00000465301 FSIP1Q8NA03 581 aa9.37□□□□□ -0.91
RTL9-201ENST00000465301 SMARCC2Q8TAQ2 1214 aa9.37□□□□□ -0.91
RTL9-201ENST00000465301 NBPF4Q96M43 638 aa9.37□□□□□ -0.91
RTL9-201ENST00000465301 CAMK4Q16566 473 aa9.37□□□□□ -0.91
RTL9-201ENST00000465301 CEP128Q6ZU80 1094 aa9.37□□□□□ -0.91
RTL9-201ENST00000465301 TRIM47Q96LD4 638 aa9.37□□□□□ -0.91
RTL9-201ENST00000465301 PUS7Q96PZ0 661 aaKnown RBP9.37□□□□□ -0.91
RTL9-201ENST00000465301 USP25Q9UHP3 1055 aa9.37□□□□□ -0.91
RTL9-201ENST00000465301 SMARCA4P51532 1647 aa9.37□□□□□ -0.91
RTL9-201ENST00000465301 CCDC141Q6ZP82 1450 aa9.37□□□□□ -0.91
RTL9-201ENST00000465301 CNGA1P29973 690 aa9.37□□□□□ -0.91
RTL9-201ENST00000465301 TNNI2P48788 182 aa9.37□□□□□ -0.91
RTL9-201ENST00000465301 MXRA7P84157 204 aa9.37□□□□□ -0.91
RTL9-201ENST00000465301 SH2D4AQ9H788 454 aa9.37□□□□□ -0.91
RTL9-201ENST00000465301 ZBTB24O43167 697 aaPredicted RBP9.36□□□□□ -0.91
RTL9-201ENST00000465301 TMPOP42166 694 aaKnown RBP9.36□□□□□ -0.91
RTL9-201ENST00000465301 JAKMIP2Q96AA8 810 aa9.36□□□□□ -0.91
RTL9-201ENST00000465301 CALM1P0DP23 149 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms