RNA–Protein interactions for RNA: ENST00000465292.5

KCNS3-204, Transcript of potassium voltage-gated channel modifier subfamily S member 3, humanhuman

TSL 4

Gene KCNS3, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS3-204ENST00000465292 CACNA1SQ13698 1873 aa28.2■■■□□ 2.1
KCNS3-204ENST00000465292 DPY19L2Q6NUT2 758 aa28.19■■■□□ 2.1
KCNS3-204ENST00000465292 FER1L6Q2WGJ9 1857 aa28.19■■■□□ 2.1
KCNS3-204ENST00000465292 ELL2O00472 640 aaPredicted RBP28.18■■■□□ 2.1
KCNS3-204ENST00000465292 RBM46Q8TBY0 533 aaKnown RBP28.18■■■□□ 2.1
KCNS3-204ENST00000465292 MRS2Q9HD23 443 aa28.18■■■□□ 2.1
KCNS3-204ENST00000465292 CCDC88AQ3V6T2 1871 aa28.18■■■□□ 2.1
KCNS3-204ENST00000465292 TNRC6CQ9HCJ0 1690 aaKnown RBP28.17■■■□□ 2.1
KCNS3-204ENST00000465292 TCIRG1Q13488 830 aa28.17■■■□□ 2.1
KCNS3-204ENST00000465292 RTKN2Q8IZC4 609 aa28.17■■■□□ 2.1
KCNS3-204ENST00000465292 FKBP4Q02790 459 aaKnown RBP eCLIP28.16■■■□□ 2.1
KCNS3-204ENST00000465292 C3orf67Q6ZVT6 689 aa28.16■■■□□ 2.1
KCNS3-204ENST00000465292 NLRP10Q86W26 655 aa28.16■■■□□ 2.1
KCNS3-204ENST00000465292 RBM17Q96I25 401 aaKnown RBP28.16■■■□□ 2.1
KCNS3-204ENST00000465292 NLRP3Q96P20 1036 aa28.16■■■□□ 2.1
KCNS3-204ENST00000465292 ARFGEF2Q9Y6D5 1785 aa28.16■■■□□ 2.1
KCNS3-204ENST00000465292 VEGFAP15692 232 aaPredicted RBP28.15■■■□□ 2.1
KCNS3-204ENST00000465292 HOXA10P31260 410 aaPredicted RBP28.15■■■□□ 2.1
KCNS3-204ENST00000465292 ANKRD13DQ6ZTN6 518 aa28.15■■■□□ 2.1
KCNS3-204ENST00000465292 PLBD2Q8NHP8 589 aa28.15■■■□□ 2.1
KCNS3-204ENST00000465292 ZNF277Q9NRM2 450 aaPredicted RBP28.15■■■□□ 2.1
KCNS3-204ENST00000465292 HYPKQ9NX55 129 aa28.15■■■□□ 2.1
KCNS3-204ENST00000465292 SLC10A5Q5PT55 438 aa28.14■■■□□ 2.1
KCNS3-204ENST00000465292 ZNF428Q96B54 188 aa28.14■■■□□ 2.1
KCNS3-204ENST00000465292 RIC1Q4ADV7 1423 aa28.14■■■□□ 2.1
KCNS3-204ENST00000465292 TCERG1O14776 1098 aaKnown RBP28.13■■■□□ 2.09
KCNS3-204ENST00000465292 TRMT112Q9UI30 125 aaKnown RBP28.13■■■□□ 2.09
KCNS3-204ENST00000465292 TIAM2Q8IVF5 1701 aa28.12■■■□□ 2.09
KCNS3-204ENST00000465292 SYNE4Q8N205 404 aa28.12■■■□□ 2.09
KCNS3-204ENST00000465292 C8orf58Q8NAV2 365 aa28.12■■■□□ 2.09
KCNS3-204ENST00000465292 CRAMP1Q96RY5 1269 aa28.12■■■□□ 2.09
KCNS3-204ENST00000465292 HCLS1P14317 486 aaPredicted RBP28.11■■■□□ 2.09
KCNS3-204ENST00000465292 DDNO94850 711 aaPredicted RBP28.1■■■□□ 2.09
KCNS3-204ENST00000465292 FSTL1Q12841 308 aa28.1■■■□□ 2.09
KCNS3-204ENST00000465292 RNF123Q5XPI4 1314 aa28.1■■■□□ 2.09
KCNS3-204ENST00000465292 CEP350Q5VT06 3117 aa28.09■■■□□ 2.09
KCNS3-204ENST00000465292 ATP5J2-PTCD1G3V325 749 aa28.09■■■□□ 2.09
KCNS3-204ENST00000465292 CC2D2BQ6DHV5 1058 aa28.09■■■□□ 2.09
KCNS3-204ENST00000465292 POTECB2RU33 542 aa28.08■■■□□ 2.09
KCNS3-204ENST00000465292 PPEF1O14829 653 aaPredicted RBP28.08■■■□□ 2.09
KCNS3-204ENST00000465292 APLP1P51693 650 aa28.08■■■□□ 2.09
KCNS3-204ENST00000465292 WWC1Q8IX03 1113 aa28.08■■■□□ 2.09
KCNS3-204ENST00000465292 PHAXQ9H814 394 aaKnown RBP28.08■■■□□ 2.09
KCNS3-204ENST00000465292 SH3TC1Q8TE82 1336 aa28.08■■■□□ 2.09
KCNS3-204ENST00000465292 IARSP41252 1262 aaKnown RBP28.07■■■□□ 2.08
KCNS3-204ENST00000465292 CCDC27Q2M243 656 aa28.07■■■□□ 2.08
KCNS3-204ENST00000465292 SMC1BQ8NDV3 1235 aa28.07■■■□□ 2.08
KCNS3-204ENST00000465292 TSR2Q969E8 191 aaKnown RBP28.07■■■□□ 2.08
KCNS3-204ENST00000465292 DICER1Q9UPY3 1922 aaKnown RBP28.06■■■□□ 2.08
KCNS3-204ENST00000465292 RIC3Q7Z5B4 369 aa28.06■■■□□ 2.08
KCNS3-204ENST00000465292 SLC51AQ86UW1 340 aa28.06■■■□□ 2.08
KCNS3-204ENST00000465292 PSMD1Q99460 953 aa28.06■■■□□ 2.08
KCNS3-204ENST00000465292 ISCA1Q9BUE6 129 aa28.06■■■□□ 2.08
KCNS3-204ENST00000465292 GOLGA2Q08379 1002 aa28.05■■■□□ 2.08
KCNS3-204ENST00000465292 TSPYL6Q8N831 410 aa28.05■■■□□ 2.08
KCNS3-204ENST00000465292 TMX4Q9H1E5 349 aaPredicted RBP28.05■■■□□ 2.08
KCNS3-204ENST00000465292 SALL2Q9Y467 1007 aaPredicted RBP28.05■■■□□ 2.08
KCNS3-204ENST00000465292 CCDC30Q5VVM6 783 aa28.04■■■□□ 2.08
KCNS3-204ENST00000465292 GRIPAP1Q4V328 841 aa28.03■■■□□ 2.08
KCNS3-204ENST00000465292 FAM89AQ96GI7 184 aa28.03■■■□□ 2.08
KCNS3-204ENST00000465292 CHMP4AQ9BY43 222 aa28.03■■■□□ 2.08
KCNS3-204ENST00000465292 ANKRD36CQ5JPF3 1778 aa28.03■■■□□ 2.08
KCNS3-204ENST00000465292 ABCC4O15439 1325 aa28.02■■■□□ 2.08
KCNS3-204ENST00000465292 RTL5Q5HYW3 569 aaPredicted RBP28.02■■■□□ 2.08
KCNS3-204ENST00000465292 DDX46Q7L014 1031 aaKnown RBP28.02■■■□□ 2.08
KCNS3-204ENST00000465292 SNED1Q8TER0 1413 aa28.01■■■□□ 2.08
KCNS3-204ENST00000465292 JDP2Q8WYK2 163 aa28.01■■■□□ 2.07
KCNS3-204ENST00000465292 ATP6V0A2Q9Y487 856 aa28.01■■■□□ 2.07
KCNS3-204ENST00000465292 WDR90Q96KV7 1748 aa28.01■■■□□ 2.07
KCNS3-204ENST00000465292 ZNF541Q9H0D2 1346 aa28■■■□□ 2.07
KCNS3-204ENST00000465292 BBOX1O75936 387 aa27.99■■■□□ 2.07
KCNS3-204ENST00000465292 TRIM28Q13263 835 aaKnown RBP27.99■■■□□ 2.07
KCNS3-204ENST00000465292 MYD88Q99836 296 aa27.99■■■□□ 2.07
KCNS3-204ENST00000465292 FZD9O00144 591 aa27.98■■■□□ 2.07
KCNS3-204ENST00000465292 HTRA3P83110 453 aa27.98■■■□□ 2.07
KCNS3-204ENST00000465292 NCBP3Q53F19 620 aaKnown RBP27.98■■■□□ 2.07
KCNS3-204ENST00000465292 FAM9BQ8IZU0 186 aa27.98■■■□□ 2.07
KCNS3-204ENST00000465292 IL16Q14005 1332 aa27.97■■■□□ 2.07
KCNS3-204ENST00000465292 LARGE2Q8N3Y3 721 aa27.97■■■□□ 2.07
KCNS3-204ENST00000465292 IQCA1LA6NCM1 817 aa27.96■■■□□ 2.07
KCNS3-204ENST00000465292 DDX58O95786 925 aaKnown RBP27.96■■■□□ 2.07
KCNS3-204ENST00000465292 GRAPQ13588 217 aa27.96■■■□□ 2.07
KCNS3-204ENST00000465292 TWISTNBQ3B726 338 aaPredicted RBP27.96■■■□□ 2.07
KCNS3-204ENST00000465292 SP8Q8IXZ3 490 aa27.96■■■□□ 2.07
KCNS3-204ENST00000465292 GRAPLQ8TC17 118 aaPredicted RBP27.96■■■□□ 2.07
KCNS3-204ENST00000465292 IRS4O14654 1257 aaPredicted RBP27.95■■■□□ 2.06
KCNS3-204ENST00000465292 L3MBTL3Q96JM7 780 aaPredicted RBP27.95■■■□□ 2.06
KCNS3-204ENST00000465292 STK31Q9BXU1 1019 aa27.95■■■□□ 2.06
KCNS3-204ENST00000465292 EIF6P56537 245 aaKnown RBP27.94■■■□□ 2.06
KCNS3-204ENST00000465292 DNAJC5GQ8N7S2 189 aa27.94■■■□□ 2.06
KCNS3-204ENST00000465292 POTEIP0CG38 1075 aa27.93■■■□□ 2.06
KCNS3-204ENST00000465292 POTEJP0CG39 1038 aa27.93■■■□□ 2.06
KCNS3-204ENST00000465292 SF3B3Q15393 1217 aaKnown RBP27.93■■■□□ 2.06
KCNS3-204ENST00000465292 DPP8Q6V1X1 898 aaPredicted RBP27.93■■■□□ 2.06
KCNS3-204ENST00000465292 MPNDQ8N594 471 aa27.93■■■□□ 2.06
KCNS3-204ENST00000465292 ZBTB38Q8NAP3 1195 aaPredicted RBP27.93■■■□□ 2.06
KCNS3-204ENST00000465292 TAF1DQ9H5J8 278 aaPredicted RBP27.93■■■□□ 2.06
KCNS3-204ENST00000465292 GJA3Q9Y6H8 435 aa27.93■■■□□ 2.06
KCNS3-204ENST00000465292 PPIP5K2O43314 1243 aa27.92■■■□□ 2.06
KCNS3-204ENST00000465292 WDR63Q8IWG1 891 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms