RNA–Protein interactions for RNA: ENST00000465183.1

TXNDC9-208, Transcript of thioredoxin domain containing 9, human

TSL 2

Gene TXNDC9, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TXNDC9-208	ENST00000465183	FMR1	Q06787	632 aa	Known RBP eCLIP	13.94	□□□□□ -0.18
TXNDC9-208	ENST00000465183	CRY2	Q49AN0	593 aa		13.94	□□□□□ -0.18
TXNDC9-208	ENST00000465183	ZNF496	Q96IT1	587 aa	Predicted RBP	13.94	□□□□□ -0.18
TXNDC9-208	ENST00000465183	FMNL2	Q96PY5	1086 aa		13.94	□□□□□ -0.18
TXNDC9-208	ENST00000465183	KIF7	Q2M1P5	1343 aa		13.93	□□□□□ -0.18
TXNDC9-208	ENST00000465183	DDX60	Q8IY21	1712 aa	Known RBP	13.93	□□□□□ -0.18
TXNDC9-208	ENST00000465183	CDC37L1	Q7L3B6	337 aa		13.93	□□□□□ -0.18
TXNDC9-208	ENST00000465183	CTU1	Q7Z7A3	348 aa	Known RBP	13.93	□□□□□ -0.18
TXNDC9-208	ENST00000465183	ANKRD36C	Q5JPF3	1778 aa		13.93	□□□□□ -0.18
TXNDC9-208	ENST00000465183	LARGE2	Q8N3Y3	721 aa		13.92	□□□□□ -0.18
TXNDC9-208	ENST00000465183	CCDC102A	Q96A19	550 aa		13.92	□□□□□ -0.18
TXNDC9-208	ENST00000465183	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.92	□□□□□ -0.18
TXNDC9-208	ENST00000465183	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.92	□□□□□ -0.18
TXNDC9-208	ENST00000465183	TEF	Q10587	303 aa		13.91	□□□□□ -0.18
TXNDC9-208	ENST00000465183	NIM1K	Q8IY84	436 aa		13.91	□□□□□ -0.18
TXNDC9-208	ENST00000465183	HOXA10	P31260	410 aa	Predicted RBP	13.9	□□□□□ -0.18
TXNDC9-208	ENST00000465183	OLFM4	Q6UX06	510 aa		13.9	□□□□□ -0.18
TXNDC9-208	ENST00000465183	NYX	Q9GZU5	481 aa		13.9	□□□□□ -0.18
TXNDC9-208	ENST00000465183	MKI67	P46013	3256 aa	Known RBP	13.89	□□□□□ -0.19
TXNDC9-208	ENST00000465183	CEMIP	Q8WUJ3	1361 aa		13.89	□□□□□ -0.19
TXNDC9-208	ENST00000465183	NPC1L1	Q9UHC9	1359 aa		13.89	□□□□□ -0.19
TXNDC9-208	ENST00000465183	A1BG	P04217	495 aa		13.89	□□□□□ -0.19
TXNDC9-208	ENST00000465183	HUNK	P57058	714 aa		13.89	□□□□□ -0.19
TXNDC9-208	ENST00000465183	MTHFSD	Q2M296	383 aa	Known RBP	13.89	□□□□□ -0.19
TXNDC9-208	ENST00000465183	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
TXNDC9-208	ENST00000465183	CEP290	O15078	2479 aa		13.88	□□□□□ -0.19
TXNDC9-208	ENST00000465183	FAM155A	B1AL88	458 aa	Predicted RBP	13.88	□□□□□ -0.19
TXNDC9-208	ENST00000465183	HABP4	Q5JVS0	413 aa	Known RBP	13.88	□□□□□ -0.19
TXNDC9-208	ENST00000465183	RGMB	Q6NW40	437 aa		13.88	□□□□□ -0.19
TXNDC9-208	ENST00000465183	MORC1	Q86VD1	984 aa		13.88	□□□□□ -0.19
TXNDC9-208	ENST00000465183	CRAMP1	Q96RY5	1269 aa		13.88	□□□□□ -0.19
TXNDC9-208	ENST00000465183	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.88	□□□□□ -0.19
TXNDC9-208	ENST00000465183	KIAA0100	Q14667	2235 aa	Known RBP	13.88	□□□□□ -0.19
TXNDC9-208	ENST00000465183	LAMB2	P55268	1798 aa		13.88	□□□□□ -0.19
TXNDC9-208	ENST00000465183	CUL9	Q8IWT3	2517 aa		13.88	□□□□□ -0.19
TXNDC9-208	ENST00000465183	LAMB1	P07942	1786 aa		13.87	□□□□□ -0.19
TXNDC9-208	ENST00000465183	NOM1	Q5C9Z4	860 aa	Known RBP	13.87	□□□□□ -0.19
TXNDC9-208	ENST00000465183	SUPT20H	Q8NEM7	779 aa		13.87	□□□□□ -0.19
TXNDC9-208	ENST00000465183	RNF186	Q9NXI6	227 aa		13.87	□□□□□ -0.19
TXNDC9-208	ENST00000465183	GNAT3	A8MTJ3	354 aa		13.86	□□□□□ -0.19
TXNDC9-208	ENST00000465183	ZNRF3	Q9ULT6	936 aa		13.86	□□□□□ -0.19
TXNDC9-208	ENST00000465183	HPS5	Q9UPZ3	1129 aa		13.86	□□□□□ -0.19
TXNDC9-208	ENST00000465183	LRRC37A	A6NMS7	1700 aa		13.86	□□□□□ -0.19
TXNDC9-208	ENST00000465183	PSME4	Q14997	1843 aa		13.85	□□□□□ -0.19
TXNDC9-208	ENST00000465183	PPIP5K2	O43314	1243 aa		13.85	□□□□□ -0.19
TXNDC9-208	ENST00000465183	GTF2E1	P29083	439 aa	Predicted RBP	13.85	□□□□□ -0.19
TXNDC9-208	ENST00000465183	TNIP1	Q15025	636 aa		13.85	□□□□□ -0.19
TXNDC9-208	ENST00000465183	C2orf69	Q8N8R5	385 aa		13.85	□□□□□ -0.19
TXNDC9-208	ENST00000465183	GAS2L2	Q8NHY3	880 aa		13.85	□□□□□ -0.19
TXNDC9-208	ENST00000465183	RPGR	Q92834	1020 aa	Known RBP	13.85	□□□□□ -0.19
TXNDC9-208	ENST00000465183	ZIC5	Q96T25	663 aa		13.85	□□□□□ -0.19
TXNDC9-208	ENST00000465183	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.85	□□□□□ -0.19
TXNDC9-208	ENST00000465183	TMX4	Q9H1E5	349 aa	Predicted RBP	13.85	□□□□□ -0.19
TXNDC9-208	ENST00000465183	TRPA1	O75762	1119 aa		13.84	□□□□□ -0.19
TXNDC9-208	ENST00000465183	CXCL9	Q07325	125 aa		13.84	□□□□□ -0.19
TXNDC9-208	ENST00000465183	RBM17	Q96I25	401 aa	Known RBP	13.84	□□□□□ -0.19
TXNDC9-208	ENST00000465183	PAPPA2	Q9BXP8	1791 aa		13.83	□□□□□ -0.19
TXNDC9-208	ENST00000465183	SLC10A3	P09131	477 aa		13.83	□□□□□ -0.2
TXNDC9-208	ENST00000465183	GMPS	P49915	693 aa	Predicted RBP	13.83	□□□□□ -0.2
TXNDC9-208	ENST00000465183	KIF23	Q02241	960 aa	Predicted RBP	13.83	□□□□□ -0.2
TXNDC9-208	ENST00000465183	IL17RE	Q8NFR9	667 aa		13.83	□□□□□ -0.2
TXNDC9-208	ENST00000465183	DPF2	Q92785	391 aa		13.83	□□□□□ -0.2
TXNDC9-208	ENST00000465183	ZNF408	Q9H9D4	720 aa		13.83	□□□□□ -0.2
TXNDC9-208	ENST00000465183	GBA2	Q9HCG7	927 aa	Predicted RBP	13.83	□□□□□ -0.2
TXNDC9-208	ENST00000465183	HTT	P42858	3142 aa		13.82	□□□□□ -0.2
TXNDC9-208	ENST00000465183	ERVV-1	B6SEH8	477 aa		13.82	□□□□□ -0.2
TXNDC9-208	ENST00000465183		H7C1D1	291 aa		13.82	□□□□□ -0.2
TXNDC9-208	ENST00000465183	PPEF1	O14829	653 aa	Predicted RBP	13.82	□□□□□ -0.2
TXNDC9-208	ENST00000465183	HMOX1	P09601	288 aa		13.82	□□□□□ -0.2
TXNDC9-208	ENST00000465183	SNRPA1	P09661	255 aa	Known RBP	13.82	□□□□□ -0.2
TXNDC9-208	ENST00000465183	PANK3	Q9H999	370 aa		13.82	□□□□□ -0.2
TXNDC9-208	ENST00000465183	USP16	Q9Y5T5	823 aa		13.82	□□□□□ -0.2
TXNDC9-208	ENST00000465183	TAF1	P21675	1872 aa		13.82	□□□□□ -0.2
TXNDC9-208	ENST00000465183	ABCC12	Q96J65	1359 aa		13.82	□□□□□ -0.2
TXNDC9-208	ENST00000465183	CENPF	P49454	3210 aa		13.81	□□□□□ -0.2
TXNDC9-208	ENST00000465183	TRIOBP	Q9H2D6	2365 aa		13.81	□□□□□ -0.2
TXNDC9-208	ENST00000465183	ZNF157	P51786	506 aa	Predicted RBP	13.81	□□□□□ -0.2
TXNDC9-208	ENST00000465183	HIRA	P54198	1017 aa	Predicted RBP	13.81	□□□□□ -0.2
TXNDC9-208	ENST00000465183	KIAA2012	Q0VF49	1180 aa		13.81	□□□□□ -0.2
TXNDC9-208	ENST00000465183	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.81	□□□□□ -0.2
TXNDC9-208	ENST00000465183	CSRNP1	Q96S65	589 aa		13.81	□□□□□ -0.2
TXNDC9-208	ENST00000465183	BCL2L13	Q9BXK5	485 aa		13.81	□□□□□ -0.2
TXNDC9-208	ENST00000465183	ATP6V0A2	Q9Y487	856 aa		13.81	□□□□□ -0.2
TXNDC9-208	ENST00000465183	BTBD11	A6QL63	1104 aa		13.8	□□□□□ -0.2
TXNDC9-208	ENST00000465183	AOC3	Q16853	763 aa		13.8	□□□□□ -0.2
TXNDC9-208	ENST00000465183	CNOT7	Q9UIV1	285 aa	Known RBP	13.8	□□□□□ -0.2
TXNDC9-208	ENST00000465183	KDM3B	Q7LBC6	1761 aa		13.8	□□□□□ -0.2
TXNDC9-208	ENST00000465183	SZT2	Q5T011	3432 aa		13.79	□□□□□ -0.2
TXNDC9-208	ENST00000465183	DIAPH1	O60610	1272 aa	Known RBP	13.79	□□□□□ -0.2
TXNDC9-208	ENST00000465183	FXR1	P51114	621 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
TXNDC9-208	ENST00000465183	FKBP1B	P68106	108 aa		13.79	□□□□□ -0.2
TXNDC9-208	ENST00000465183	KRT26	Q7Z3Y9	468 aa		13.79	□□□□□ -0.2
TXNDC9-208	ENST00000465183	TRPM4	Q8TD43	1214 aa		13.79	□□□□□ -0.2
TXNDC9-208	ENST00000465183	TIMELESS	Q9UNS1	1208 aa		13.79	□□□□□ -0.2
TXNDC9-208	ENST00000465183	RPS12	P25398	132 aa	Known RBP	13.78	□□□□□ -0.2
TXNDC9-208	ENST00000465183	INTS3	Q68E01	1043 aa	Known RBP	13.78	□□□□□ -0.2
TXNDC9-208	ENST00000465183	USP48	Q86UV5	1035 aa		13.78	□□□□□ -0.2
TXNDC9-208	ENST00000465183	CFHR5	Q9BXR6	569 aa		13.78	□□□□□ -0.2
TXNDC9-208	ENST00000465183	HDAC9	Q9UKV0	1011 aa		13.78	□□□□□ -0.2
TXNDC9-208	ENST00000465183	KNSTRN	Q9Y448	316 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms