RNA–Protein interactions for RNA: ENST00000464988.1

RBM5-213, Transcript of RNA binding motif protein 5, human

TSL 2

Gene RBM5, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM5-213	ENST00000464988	SUSD4	Q5VX71	490 aa		11.16	□□□□□ -0.62
RBM5-213	ENST00000464988	C9orf131	Q5VYM1	1079 aa		11.16	□□□□□ -0.62
RBM5-213	ENST00000464988	ANKRD13D	Q6ZTN6	518 aa		11.16	□□□□□ -0.62
RBM5-213	ENST00000464988	NUTM1	Q86Y26	1132 aa		11.16	□□□□□ -0.62
RBM5-213	ENST00000464988	WDR63	Q8IWG1	891 aa		11.16	□□□□□ -0.62
RBM5-213	ENST00000464988	PLBD2	Q8NHP8	589 aa		11.16	□□□□□ -0.62
RBM5-213	ENST00000464988	UTP14A	Q9BVJ6	771 aa	Known RBP	11.16	□□□□□ -0.62
RBM5-213	ENST00000464988	RNF123	Q5XPI4	1314 aa		11.15	□□□□□ -0.62
RBM5-213	ENST00000464988	SENP3-EIF4A1	A0A087X0R7	540 aa		11.15	□□□□□ -0.62
RBM5-213	ENST00000464988	C21orf2	O43822	256 aa		11.15	□□□□□ -0.62
RBM5-213	ENST00000464988	NTSR2	O95665	410 aa		11.15	□□□□□ -0.62
RBM5-213	ENST00000464988	LMNB1	P20700	586 aa		11.15	□□□□□ -0.62
RBM5-213	ENST00000464988	ALDH1B1	P30837	517 aa		11.15	□□□□□ -0.62
RBM5-213	ENST00000464988	ERFE	Q4G0M1	354 aa		11.15	□□□□□ -0.62
RBM5-213	ENST00000464988	PRPF40B	Q6NWY9	871 aa	Known RBP	11.15	□□□□□ -0.62
RBM5-213	ENST00000464988	C8orf58	Q8NAV2	365 aa		11.15	□□□□□ -0.62
RBM5-213	ENST00000464988	RNF181	Q9P0P0	153 aa		11.15	□□□□□ -0.62
RBM5-213	ENST00000464988	SALL2	Q9Y467	1007 aa	Predicted RBP	11.15	□□□□□ -0.62
RBM5-213	ENST00000464988	GOLGA2	Q08379	1002 aa		11.14	□□□□□ -0.63
RBM5-213	ENST00000464988	CRY2	Q49AN0	593 aa		11.14	□□□□□ -0.63
RBM5-213	ENST00000464988	POTEH	Q6S545	545 aa		11.14	□□□□□ -0.63
RBM5-213	ENST00000464988	NLRP10	Q86W26	655 aa		11.14	□□□□□ -0.63
RBM5-213	ENST00000464988	ZNF526	Q8TF50	670 aa	Predicted RBP	11.14	□□□□□ -0.63
RBM5-213	ENST00000464988	RPGR	Q92834	1020 aa	Known RBP	11.14	□□□□□ -0.63
RBM5-213	ENST00000464988	TSR2	Q969E8	191 aa	Known RBP	11.14	□□□□□ -0.63
RBM5-213	ENST00000464988	STK31	Q9BXU1	1019 aa		11.14	□□□□□ -0.63
RBM5-213	ENST00000464988	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.14	□□□□□ -0.63
RBM5-213	ENST00000464988	RIC1	Q4ADV7	1423 aa		11.14	□□□□□ -0.63
RBM5-213	ENST00000464988	ABCC12	Q96J65	1359 aa		11.14	□□□□□ -0.63
RBM5-213	ENST00000464988	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.13	□□□□□ -0.63
RBM5-213	ENST00000464988	COL11A2	P13942	1736 aa	Predicted RBP	11.13	□□□□□ -0.63
RBM5-213	ENST00000464988	DDX58	O95786	925 aa	Known RBP	11.13	□□□□□ -0.63
RBM5-213	ENST00000464988	RASSF7	Q02833	373 aa		11.13	□□□□□ -0.63
RBM5-213	ENST00000464988	TWISTNB	Q3B726	338 aa	Predicted RBP	11.13	□□□□□ -0.63
RBM5-213	ENST00000464988	SLC10A5	Q5PT55	438 aa		11.13	□□□□□ -0.63
RBM5-213	ENST00000464988	TSPYL6	Q8N831	410 aa		11.13	□□□□□ -0.63
RBM5-213	ENST00000464988	NLRP3	Q96P20	1036 aa		11.13	□□□□□ -0.63
RBM5-213	ENST00000464988	TAOK3	Q9H2K8	898 aa		11.13	□□□□□ -0.63
RBM5-213	ENST00000464988	TRMT112	Q9UI30	125 aa	Known RBP	11.13	□□□□□ -0.63
RBM5-213	ENST00000464988	LTBP3	Q9NS15	1303 aa		11.12	□□□□□ -0.63
RBM5-213	ENST00000464988	NFKBIE	O00221	500 aa		11.12	□□□□□ -0.63
RBM5-213	ENST00000464988	HOXA10	P31260	410 aa	Predicted RBP	11.12	□□□□□ -0.63
RBM5-213	ENST00000464988	CCDC93	Q567U6	631 aa		11.12	□□□□□ -0.63
RBM5-213	ENST00000464988	RIC3	Q7Z5B4	369 aa		11.12	□□□□□ -0.63
RBM5-213	ENST00000464988	RBM17	Q96I25	401 aa	Known RBP	11.12	□□□□□ -0.63
RBM5-213	ENST00000464988	MYH16	Q9H6N6	1097 aa		11.12	□□□□□ -0.63
RBM5-213	ENST00000464988	KDM2B	Q8NHM5	1336 aa		11.11	□□□□□ -0.63
RBM5-213	ENST00000464988	SH3TC1	Q8TE82	1336 aa		11.11	□□□□□ -0.63
RBM5-213	ENST00000464988	FANCI	Q9NVI1	1328 aa		11.11	□□□□□ -0.63
RBM5-213	ENST00000464988	TRIM28	Q13263	835 aa	Known RBP	11.11	□□□□□ -0.63
RBM5-213	ENST00000464988	CC2D2B	Q6DHV5	1058 aa		11.11	□□□□□ -0.63
RBM5-213	ENST00000464988	RTKN2	Q8IZC4	609 aa		11.11	□□□□□ -0.63
RBM5-213	ENST00000464988	C7orf43	Q8WVR3	580 aa		11.11	□□□□□ -0.63
RBM5-213	ENST00000464988	CRAMP1	Q96RY5	1269 aa		11.11	□□□□□ -0.63
RBM5-213	ENST00000464988	ISCA1	Q9BUE6	129 aa		11.11	□□□□□ -0.63
RBM5-213	ENST00000464988	PHAX	Q9H814	394 aa	Known RBP	11.11	□□□□□ -0.63
RBM5-213	ENST00000464988	SLX4	Q8IY92	1834 aa		11.1	□□□□□ -0.63
RBM5-213	ENST00000464988	ATP5J2-PTCD1	G3V325	749 aa		11.1	□□□□□ -0.63
RBM5-213	ENST00000464988	HSP90B1	P14625	803 aa	Known RBP	11.1	□□□□□ -0.63
RBM5-213	ENST00000464988	C1QTNF8	P60827	252 aa		11.1	□□□□□ -0.63
RBM5-213	ENST00000464988	GRIPAP1	Q4V328	841 aa		11.1	□□□□□ -0.63
RBM5-213	ENST00000464988	TMX4	Q9H1E5	349 aa	Predicted RBP	11.1	□□□□□ -0.63
RBM5-213	ENST00000464988	ANKRD36C	Q5JPF3	1778 aa		11.1	□□□□□ -0.63
RBM5-213	ENST00000464988	ARFGEF2	Q9Y6D5	1785 aa		11.09	□□□□□ -0.63
RBM5-213	ENST00000464988	HCLS1	P14317	486 aa	Predicted RBP	11.09	□□□□□ -0.63
RBM5-213	ENST00000464988	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.09	□□□□□ -0.63
RBM5-213	ENST00000464988	MKRN4P	Q13434	485 aa	Predicted RBP	11.09	□□□□□ -0.63
RBM5-213	ENST00000464988	SBF1	O95248	1867 aa		11.08	□□□□□ -0.64
RBM5-213	ENST00000464988	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.08	□□□□□ -0.64
RBM5-213	ENST00000464988	PRELP	P51888	382 aa		11.08	□□□□□ -0.64
RBM5-213	ENST00000464988	EXOSC9	Q06265	439 aa	Known RBP	11.08	□□□□□ -0.64
RBM5-213	ENST00000464988	NEXN	Q0ZGT2	675 aa		11.08	□□□□□ -0.64
RBM5-213	ENST00000464988	DPY19L2	Q6NUT2	758 aa		11.08	□□□□□ -0.64
RBM5-213	ENST00000464988	KSR2	Q6VAB6	950 aa		11.08	□□□□□ -0.64
RBM5-213	ENST00000464988	C3orf67	Q6ZVT6	689 aa		11.08	□□□□□ -0.64
RBM5-213	ENST00000464988	DDX46	Q7L014	1031 aa	Known RBP	11.08	□□□□□ -0.64
RBM5-213	ENST00000464988	CCDC191	Q8NCU4	936 aa		11.08	□□□□□ -0.64
RBM5-213	ENST00000464988	FAM89A	Q96GI7	184 aa		11.08	□□□□□ -0.64
RBM5-213	ENST00000464988	MYD88	Q99836	296 aa		11.08	□□□□□ -0.64
RBM5-213	ENST00000464988	METTL22	Q9BUU2	404 aa	Predicted RBP	11.08	□□□□□ -0.64
RBM5-213	ENST00000464988	FER1L6	Q2WGJ9	1857 aa		11.07	□□□□□ -0.64
RBM5-213	ENST00000464988	GLTPD2	A6NH11	291 aa		11.07	□□□□□ -0.64
RBM5-213	ENST00000464988	TCERG1	O14776	1098 aa	Known RBP	11.07	□□□□□ -0.64
RBM5-213	ENST00000464988	KIF3C	O14782	793 aa		11.07	□□□□□ -0.64
RBM5-213	ENST00000464988	PPEF1	O14829	653 aa	Predicted RBP	11.07	□□□□□ -0.64
RBM5-213	ENST00000464988	VAMP4	O75379	141 aa		11.07	□□□□□ -0.64
RBM5-213	ENST00000464988	BBOX1	O75936	387 aa		11.07	□□□□□ -0.64
RBM5-213	ENST00000464988	SYNE4	Q8N205	404 aa		11.07	□□□□□ -0.64
RBM5-213	ENST00000464988	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.07	□□□□□ -0.64
RBM5-213	ENST00000464988	CWC25	Q9NXE8	425 aa	Predicted RBP	11.07	□□□□□ -0.64
RBM5-213	ENST00000464988	MAP3K2	Q9Y2U5	619 aa		11.07	□□□□□ -0.64
RBM5-213	ENST00000464988	ZNF521	Q96K83	1311 aa		11.07	□□□□□ -0.64
RBM5-213	ENST00000464988	CACNA1S	Q13698	1873 aa		11.06	□□□□□ -0.64
RBM5-213	ENST00000464988	PI4KAP2	A4QPH2	592 aa		11.06	□□□□□ -0.64
RBM5-213	ENST00000464988	IRS4	O14654	1257 aa	Predicted RBP	11.06	□□□□□ -0.64
RBM5-213	ENST00000464988	FLII	Q13045	1269 aa		11.06	□□□□□ -0.64
RBM5-213	ENST00000464988	OLFM4	Q6UX06	510 aa		11.06	□□□□□ -0.64
RBM5-213	ENST00000464988	TMC4	Q7Z404	712 aa		11.06	□□□□□ -0.64
RBM5-213	ENST00000464988	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.06	□□□□□ -0.64
RBM5-213	ENST00000464988	PI4KAP1	Q8N8J0	262 aa		11.06	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms