RNA–Protein interactions for RNA: ENST00000464304.1

HMG20B-208, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-208ENST00000464304 NLRP10Q86W26 655 aa23.94■■□□□ 1.42
HMG20B-208ENST00000464304 MYD88Q99836 296 aa23.94■■□□□ 1.42
HMG20B-208ENST00000464304 METTL22Q9BUU2 404 aaPredicted RBP23.94■■□□□ 1.42
HMG20B-208ENST00000464304 NTSR2O95665 410 aa23.93■■□□□ 1.42
HMG20B-208ENST00000464304 TPTE2Q6XPS3 522 aa23.93■■□□□ 1.42
HMG20B-208ENST00000464304 SMC4Q9NTJ3 1288 aa23.93■■□□□ 1.42
HMG20B-208ENST00000464304 ABCC12Q96J65 1359 aa23.92■■□□□ 1.42
HMG20B-208ENST00000464304 ST5P78524 1137 aa23.92■■□□□ 1.42
HMG20B-208ENST00000464304 NUTM1Q86Y26 1132 aa23.92■■□□□ 1.42
HMG20B-208ENST00000464304 NYXQ9GZU5 481 aa23.92■■□□□ 1.42
HMG20B-208ENST00000464304 TGFB2P61812 414 aa23.91■■□□□ 1.42
HMG20B-208ENST00000464304 PPP1R42Q7Z4L9 355 aa23.91■■□□□ 1.42
HMG20B-208ENST00000464304 F6X3S4 739 aa23.9■■□□□ 1.42
HMG20B-208ENST00000464304 DPEP1P16444 411 aa23.9■■□□□ 1.42
HMG20B-208ENST00000464304 GTF2E1P29083 439 aaPredicted RBP23.9■■□□□ 1.42
HMG20B-208ENST00000464304 RARSP54136 660 aaKnown RBP23.9■■□□□ 1.42
HMG20B-208ENST00000464304 ERFEQ4G0M1 354 aa23.9■■□□□ 1.42
HMG20B-208ENST00000464304 DNAAF4Q8WXU2 420 aa23.9■■□□□ 1.42
HMG20B-208ENST00000464304 UTP14AQ9BVJ6 771 aaKnown RBP23.9■■□□□ 1.42
HMG20B-208ENST00000464304 ARFGEF1Q9Y6D6 1849 aa23.89■■□□□ 1.42
HMG20B-208ENST00000464304 MYH3P11055 1940 aa23.89■■□□□ 1.42
HMG20B-208ENST00000464304 A0A0G2JLW4 131 aa23.89■■□□□ 1.41
HMG20B-208ENST00000464304 CHRNA5P30532 468 aa23.89■■□□□ 1.41
HMG20B-208ENST00000464304 BRIP1Q9BX63 1249 aa23.89■■□□□ 1.41
HMG20B-208ENST00000464304 TRIM28Q13263 835 aaKnown RBP23.88■■□□□ 1.41
HMG20B-208ENST00000464304 WWC3Q9ULE0 1092 aa23.88■■□□□ 1.41
HMG20B-208ENST00000464304 RIC1Q4ADV7 1423 aa23.87■■□□□ 1.41
HMG20B-208ENST00000464304 IGKV5-2P06315 115 aa23.87■■□□□ 1.41
HMG20B-208ENST00000464304 NEXNQ0ZGT2 675 aa23.87■■□□□ 1.41
HMG20B-208ENST00000464304 TRMT112Q9UI30 125 aaKnown RBP23.87■■□□□ 1.41
HMG20B-208ENST00000464304 PDE6BP35913 854 aa23.86■■□□□ 1.41
HMG20B-208ENST00000464304 CWF19L2Q2TBE0 894 aaKnown RBP23.86■■□□□ 1.41
HMG20B-208ENST00000464304 C2CD5Q86YS7 1000 aa23.86■■□□□ 1.41
HMG20B-208ENST00000464304 SYNE4Q8N205 404 aa23.86■■□□□ 1.41
HMG20B-208ENST00000464304 PTPRCP08575 1304 aa23.85■■□□□ 1.41
HMG20B-208ENST00000464304 RNF123Q5XPI4 1314 aa23.85■■□□□ 1.41
HMG20B-208ENST00000464304 KCNA3P22001 575 aa23.85■■□□□ 1.41
HMG20B-208ENST00000464304 BRPF1P55201 1214 aaPredicted RBP23.85■■□□□ 1.41
HMG20B-208ENST00000464304 CCDC191Q8NCU4 936 aa23.85■■□□□ 1.41
HMG20B-208ENST00000464304 CWC25Q9NXE8 425 aaPredicted RBP23.85■■□□□ 1.41
HMG20B-208ENST00000464304 TAF1P21675 1872 aa23.85■■□□□ 1.41
HMG20B-208ENST00000464304 SH3TC1Q8TE82 1336 aa23.84■■□□□ 1.41
HMG20B-208ENST00000464304 NEURL1BA8MQ27 555 aa23.84■■□□□ 1.41
HMG20B-208ENST00000464304 ZNF526Q8TF50 670 aaPredicted RBP23.84■■□□□ 1.41
HMG20B-208ENST00000464304 SLX4Q8IY92 1834 aa23.84■■□□□ 1.41
HMG20B-208ENST00000464304 H0YIN7 160 aa23.83■■□□□ 1.41
HMG20B-208ENST00000464304 BCAR3O75815 825 aa23.83■■□□□ 1.41
HMG20B-208ENST00000464304 FAM89AQ96GI7 184 aa23.83■■□□□ 1.41
HMG20B-208ENST00000464304 GRIN3BO60391 1043 aa23.82■■□□□ 1.4
HMG20B-208ENST00000464304 RTL5Q5HYW3 569 aaPredicted RBP23.82■■□□□ 1.4
HMG20B-208ENST00000464304 SLC10A5Q5PT55 438 aa23.82■■□□□ 1.4
HMG20B-208ENST00000464304 LINS1Q8NG48 757 aa23.82■■□□□ 1.4
HMG20B-208ENST00000464304 NOB1Q9ULX3 412 aaKnown RBP23.82■■□□□ 1.4
HMG20B-208ENST00000464304 KLRG2A4D1S0 409 aaPredicted RBP23.81■■□□□ 1.4
HMG20B-208ENST00000464304 BEND3Q5T5X7 828 aa23.81■■□□□ 1.4
HMG20B-208ENST00000464304 SLC4A10Q6U841 1118 aa23.81■■□□□ 1.4
HMG20B-208ENST00000464304 C3orf67Q6ZVT6 689 aa23.81■■□□□ 1.4
HMG20B-208ENST00000464304 JARID2Q92833 1246 aaPredicted RBP23.81■■□□□ 1.4
HMG20B-208ENST00000464304 PDZRN3Q9UPQ7 1066 aa23.81■■□□□ 1.4
HMG20B-208ENST00000464304 KIF16BQ96L93 1317 aa23.81■■□□□ 1.4
HMG20B-208ENST00000464304 SRGNP10124 158 aa23.8■■□□□ 1.4
HMG20B-208ENST00000464304 HCLS1P14317 486 aaPredicted RBP23.8■■□□□ 1.4
HMG20B-208ENST00000464304 ZBTB38Q8NAP3 1195 aaPredicted RBP23.8■■□□□ 1.4
HMG20B-208ENST00000464304 PIM2Q9P1W9 311 aa23.8■■□□□ 1.4
HMG20B-208ENST00000464304 PCCAP05165 728 aaPredicted RBP23.79■■□□□ 1.4
HMG20B-208ENST00000464304 GCKRQ14397 625 aa23.78■■□□□ 1.4
HMG20B-208ENST00000464304 ZNF622Q969S3 477 aaKnown RBP eCLIP23.78■■□□□ 1.44e-10■□□□□ 8.5
HMG20B-208ENST00000464304 BCS1LQ9Y276 419 aa23.78■■□□□ 1.4
HMG20B-208ENST00000464304 IRS4O14654 1257 aaPredicted RBP23.77■■□□□ 1.4
HMG20B-208ENST00000464304 CRY2Q49AN0 593 aa23.77■■□□□ 1.4
HMG20B-208ENST00000464304 MASTLQ96GX5 879 aa23.77■■□□□ 1.4
HMG20B-208ENST00000464304 NLRP3Q96P20 1036 aa23.77■■□□□ 1.4
HMG20B-208ENST00000464304 GPBP1L1Q9HC44 474 aaPredicted RBP23.77■■□□□ 1.4
HMG20B-208ENST00000464304 STYK1Q6J9G0 422 aa23.76■■□□□ 1.39
HMG20B-208ENST00000464304 API5Q9BZZ5 524 aaKnown RBP23.76■■□□□ 1.39
HMG20B-208ENST00000464304 SRCIN1Q9C0H9 1055 aa23.76■■□□□ 1.39
HMG20B-208ENST00000464304 CDHR2Q9BYE9 1310 aa23.76■■□□□ 1.39
HMG20B-208ENST00000464304 H7C1W4 665 aa23.75■■□□□ 1.39
HMG20B-208ENST00000464304 ALDH1L1O75891 902 aa23.75■■□□□ 1.39
HMG20B-208ENST00000464304 NPR1P16066 1061 aa23.75■■□□□ 1.39
HMG20B-208ENST00000464304 HSPA6P17066 643 aa23.75■■□□□ 1.39
HMG20B-208ENST00000464304 DALRD3Q5D0E6 543 aaKnown RBP23.75■■□□□ 1.39
HMG20B-208ENST00000464304 UBE3BQ7Z3V4 1068 aa23.75■■□□□ 1.39
HMG20B-208ENST00000464304 FRAT1Q92837 279 aaPredicted RBP23.75■■□□□ 1.39
HMG20B-208ENST00000464304 SPEF2Q9C093 1822 aa23.75■■□□□ 1.39
HMG20B-208ENST00000464304 CCDC88AQ3V6T2 1871 aa23.75■■□□□ 1.39
HMG20B-208ENST00000464304 TTLL6Q8N841 843 aa23.74■■□□□ 1.39
HMG20B-208ENST00000464304 ARHGAP45Q92619 1136 aa23.74■■□□□ 1.39
HMG20B-208ENST00000464304 RPGRQ92834 1020 aaKnown RBP23.74■■□□□ 1.39
HMG20B-208ENST00000464304 TNNQ9UQP3 1299 aa23.74■■□□□ 1.39
HMG20B-208ENST00000464304 FER1L6Q2WGJ9 1857 aa23.73■■□□□ 1.39
HMG20B-208ENST00000464304 CASP7P55210 303 aa23.73■■□□□ 1.39
HMG20B-208ENST00000464304 CNKSR1Q969H4 720 aa23.73■■□□□ 1.39
HMG20B-208ENST00000464304 TRIM27P14373 513 aa23.72■■□□□ 1.39
HMG20B-208ENST00000464304 COL4A1P02462 1669 aa23.72■■□□□ 1.39
HMG20B-208ENST00000464304 SBF1O95248 1867 aa23.71■■□□□ 1.39
HMG20B-208ENST00000464304 IPO8O15397 1037 aaKnown RBP23.71■■□□□ 1.39
HMG20B-208ENST00000464304 PDE8AO60658 829 aa23.71■■□□□ 1.39
HMG20B-208ENST00000464304 HOXA10P31260 410 aaPredicted RBP23.71■■□□□ 1.39
HMG20B-208ENST00000464304 ATF7IPQ6VMQ6 1270 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms