RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 ZNF335Q9H4Z2 1342 aaPredicted RBP24.6■■□□□ 1.53
TUBGCP3-204ENST00000464139 BRD1O95696 1058 aa24.6■■□□□ 1.53
TUBGCP3-204ENST00000464139 PLBD2Q8NHP8 589 aa24.6■■□□□ 1.53
TUBGCP3-204ENST00000464139 DDX54Q8TDD1 881 aaKnown RBP24.6■■□□□ 1.53
TUBGCP3-204ENST00000464139 TTC14Q96N46 770 aa24.6■■□□□ 1.53
TUBGCP3-204ENST00000464139 ARFGEF2Q9Y6D5 1785 aa24.6■■□□□ 1.53
TUBGCP3-204ENST00000464139 RFX5P48382 616 aaPredicted RBP24.59■■□□□ 1.53
TUBGCP3-204ENST00000464139 AK2P54819 239 aa24.59■■□□□ 1.53
TUBGCP3-204ENST00000464139 STRN4Q9NRL3 753 aa24.59■■□□□ 1.53
TUBGCP3-204ENST00000464139 STRCQ7RTU9 1775 aa24.59■■□□□ 1.53
TUBGCP3-204ENST00000464139 PTPN12Q05209 780 aaKnown RBP24.59■■□□□ 1.53
TUBGCP3-204ENST00000464139 PRPF40BQ6NWY9 871 aaKnown RBP24.59■■□□□ 1.53
TUBGCP3-204ENST00000464139 COPRSQ9NQ92 184 aa24.59■■□□□ 1.53
TUBGCP3-204ENST00000464139 COL5A2P05997 1499 aaPredicted RBP24.59■■□□□ 1.53
TUBGCP3-204ENST00000464139 NMIQ13287 307 aaPredicted RBP24.58■■□□□ 1.53
TUBGCP3-204ENST00000464139 CAVIN1Q6NZI2 390 aaKnown RBP24.58■■□□□ 1.53
TUBGCP3-204ENST00000464139 CASTP20810 708 aaKnown RBP24.58■■□□□ 1.53
TUBGCP3-204ENST00000464139 PARP4Q9UKK3 1724 aaKnown RBP24.57■■□□□ 1.52
TUBGCP3-204ENST00000464139 TTLL7Q6ZT98 887 aa24.57■■□□□ 1.52
TUBGCP3-204ENST00000464139 A1BGP04217 495 aa24.57■■□□□ 1.52
TUBGCP3-204ENST00000464139 ADCK5Q3MIX3 580 aa24.57■■□□□ 1.52
TUBGCP3-204ENST00000464139 IL2RBP14784 551 aa24.56■■□□□ 1.52
TUBGCP3-204ENST00000464139 TFCP2Q12800 502 aa24.56■■□□□ 1.52
TUBGCP3-204ENST00000464139 RABL6Q3YEC7 729 aaPredicted RBP24.56■■□□□ 1.52
TUBGCP3-204ENST00000464139 RUFY3Q7L099 469 aa24.56■■□□□ 1.52
TUBGCP3-204ENST00000464139 FSD1Q9BTV5 496 aa24.56■■□□□ 1.52
TUBGCP3-204ENST00000464139 LAMB4A4D0S4 1761 aa24.56■■□□□ 1.52
TUBGCP3-204ENST00000464139 ERVV-2B6SEH9 535 aa24.56■■□□□ 1.52
TUBGCP3-204ENST00000464139 GPT2Q8TD30 523 aa24.56■■□□□ 1.52
TUBGCP3-204ENST00000464139 CCDC171Q6TFL3 1326 aa24.55■■□□□ 1.52
TUBGCP3-204ENST00000464139 CASP7P55210 303 aa24.55■■□□□ 1.52
TUBGCP3-204ENST00000464139 EDC3Q96F86 508 aaKnown RBP24.55■■□□□ 1.52
TUBGCP3-204ENST00000464139 JAKMIP1Q96N16 626 aaKnown RBP24.55■■□□□ 1.52
TUBGCP3-204ENST00000464139 A0A0D9SFI3 127 aa24.54■■□□□ 1.52
TUBGCP3-204ENST00000464139 FOXD4L6Q3SYB3 417 aaPredicted RBP24.54■■□□□ 1.52
TUBGCP3-204ENST00000464139 LMBR1LQ6UX01 489 aa24.54■■□□□ 1.52
TUBGCP3-204ENST00000464139 FOXD4L3Q6VB84 417 aaPredicted RBP24.54■■□□□ 1.52
TUBGCP3-204ENST00000464139 FAM43AQ8N2R8 423 aa24.54■■□□□ 1.52
TUBGCP3-204ENST00000464139 CARD10Q9BWT7 1032 aa24.54■■□□□ 1.52
TUBGCP3-204ENST00000464139 DBNLQ9UJU6 430 aaKnown RBP24.54■■□□□ 1.52
TUBGCP3-204ENST00000464139 LIMCH1Q9UPQ0 1083 aa24.54■■□□□ 1.52
TUBGCP3-204ENST00000464139 RBM8AQ9Y5S9 174 aaKnown RBP24.54■■□□□ 1.52
TUBGCP3-204ENST00000464139 HIP1O00291 1037 aa24.53■■□□□ 1.52
TUBGCP3-204ENST00000464139 NECTIN1Q15223 517 aa24.53■■□□□ 1.52
TUBGCP3-204ENST00000464139 TNNI3KQ59H18 835 aa24.53■■□□□ 1.52
TUBGCP3-204ENST00000464139 FPGT-TNNI3KV9GXZ4 949 aa24.53■■□□□ 1.52
TUBGCP3-204ENST00000464139 EVA1CP58658 441 aa24.53■■□□□ 1.52
TUBGCP3-204ENST00000464139 RBM27Q9P2N5 1060 aaKnown RBP24.53■■□□□ 1.52
TUBGCP3-204ENST00000464139 CHMP3Q9Y3E7 222 aa24.53■■□□□ 1.52
TUBGCP3-204ENST00000464139 KCNJ4P48050 445 aa24.52■■□□□ 1.52
TUBGCP3-204ENST00000464139 NKX1-1Q15270 411 aaPredicted RBP24.52■■□□□ 1.52
TUBGCP3-204ENST00000464139 NDUFB9Q9Y6M9 179 aa24.52■■□□□ 1.52
TUBGCP3-204ENST00000464139 ERBB4Q15303 1308 aa24.52■■□□□ 1.52
TUBGCP3-204ENST00000464139 ZSCAN23Q3MJ62 389 aa24.52■■□□□ 1.52
TUBGCP3-204ENST00000464139 ZBTB3Q9H5J0 574 aa24.52■■□□□ 1.52
TUBGCP3-204ENST00000464139 LARGE1O95461 756 aa24.51■■□□□ 1.51
TUBGCP3-204ENST00000464139 KCNB2Q92953 911 aa24.51■■□□□ 1.51
TUBGCP3-204ENST00000464139 NSFL1CQ9UNZ2 370 aaKnown RBP24.51■■□□□ 1.51
TUBGCP3-204ENST00000464139 CREB3L3Q68CJ9 461 aa24.51■■□□□ 1.51
TUBGCP3-204ENST00000464139 MAP4K1Q92918 833 aa24.51■■□□□ 1.51
TUBGCP3-204ENST00000464139 PDRG1Q9NUG6 133 aa24.51■■□□□ 1.51
TUBGCP3-204ENST00000464139 COL15A1P39059 1388 aa24.51■■□□□ 1.51
TUBGCP3-204ENST00000464139 H7C1W4 665 aa24.5■■□□□ 1.51
TUBGCP3-204ENST00000464139 FOXO4P98177 505 aa24.5■■□□□ 1.51
TUBGCP3-204ENST00000464139 KCPQ6ZWJ8 1503 aa24.5■■□□□ 1.51
TUBGCP3-204ENST00000464139 ZSWIM6Q9HCJ5 1215 aa24.5■■□□□ 1.51
TUBGCP3-204ENST00000464139 DTNBO60941 627 aa24.49■■□□□ 1.51
TUBGCP3-204ENST00000464139 DBNDD2Q9BQY9 259 aa24.49■■□□□ 1.51
TUBGCP3-204ENST00000464139 CWC25Q9NXE8 425 aaPredicted RBP24.49■■□□□ 1.51
TUBGCP3-204ENST00000464139 CYP46A1Q9Y6A2 500 aa24.49■■□□□ 1.51
TUBGCP3-204ENST00000464139 UBR2Q8IWV8 1755 aa24.49■■□□□ 1.51
TUBGCP3-204ENST00000464139 ZKSCAN1P17029 563 aaPredicted RBP24.49■■□□□ 1.51
TUBGCP3-204ENST00000464139 CCDC9Q9Y3X0 531 aaKnown RBP24.49■■□□□ 1.51
TUBGCP3-204ENST00000464139 RPAP1Q9BWH6 1393 aaPredicted RBP24.48■■□□□ 1.51
TUBGCP3-204ENST00000464139 ATP5JP18859 108 aa24.48■■□□□ 1.51
TUBGCP3-204ENST00000464139 ZNF589Q86UQ0 364 aaPredicted RBP24.48■■□□□ 1.51
TUBGCP3-204ENST00000464139 TM6SF1Q9BZW5 370 aa24.48■■□□□ 1.51
TUBGCP3-204ENST00000464139 ZNF445P59923 1031 aa24.47■■□□□ 1.51
TUBGCP3-204ENST00000464139 COL9A3Q14050 684 aaPredicted RBP24.47■■□□□ 1.51
TUBGCP3-204ENST00000464139 VPS53Q5VIR6 699 aa24.47■■□□□ 1.51
TUBGCP3-204ENST00000464139 SNRKQ9NRH2 765 aa24.47■■□□□ 1.51
TUBGCP3-204ENST00000464139 WDR33Q9C0J8 1336 aaKnown RBP24.47■■□□□ 1.51
TUBGCP3-204ENST00000464139 ABCA3Q99758 1704 aa24.47■■□□□ 1.51
TUBGCP3-204ENST00000464139 RRAGDQ9NQL2 400 aaPredicted RBP24.47■■□□□ 1.51
TUBGCP3-204ENST00000464139 SLC27A2O14975 620 aa24.46■■□□□ 1.51
TUBGCP3-204ENST00000464139 SHANK3Q9BYB0 1731 aa24.46■■□□□ 1.51
TUBGCP3-204ENST00000464139 DNAJC2Q99543 621 aaKnown RBP24.46■■□□□ 1.51
TUBGCP3-204ENST00000464139 GDPD2Q9HCC8 539 aa24.46■■□□□ 1.51
TUBGCP3-204ENST00000464139 CHGBP05060 677 aa24.45■■□□□ 1.51
TUBGCP3-204ENST00000464139 CCDC83Q8IWF9 413 aa24.45■■□□□ 1.51
TUBGCP3-204ENST00000464139 TMEM63CQ9P1W3 806 aa24.45■■□□□ 1.51
TUBGCP3-204ENST00000464139 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.45■■□□□ 1.51
TUBGCP3-204ENST00000464139 MED23Q9ULK4 1368 aa24.45■■□□□ 1.51
TUBGCP3-204ENST00000464139 ZNF330Q9Y3S2 320 aaPredicted RBP24.45■■□□□ 1.5
TUBGCP3-204ENST00000464139 TAF6LQ9Y6J9 622 aa24.45■■□□□ 1.5
TUBGCP3-204ENST00000464139 SMC3Q9UQE7 1217 aa24.44■■□□□ 1.5
TUBGCP3-204ENST00000464139 NUP188Q5SRE5 1749 aa24.44■■□□□ 1.5
TUBGCP3-204ENST00000464139 NASPP49321 788 aaPredicted RBP24.43■■□□□ 1.5
TUBGCP3-204ENST00000464139 PAPPAQ13219 1627 aa24.43■■□□□ 1.5
TUBGCP3-204ENST00000464139 ATG9AQ7Z3C6 839 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms