RNA–Protein interactions for RNA: ENST00000464115.1

SNHG12-203, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 3

Gene SNHG12, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-203ENST00000464115 SOGA3Q5TF21 947 aa23.63■■□□□ 1.37
SNHG12-203ENST00000464115 C3orf67Q6ZVT6 689 aa23.63■■□□□ 1.37
SNHG12-203ENST00000464115 NLRP10Q86W26 655 aa23.63■■□□□ 1.37
SNHG12-203ENST00000464115 HYPKQ9NX55 129 aa23.63■■□□□ 1.37
SNHG12-203ENST00000464115 CACNA1SQ13698 1873 aa23.62■■□□□ 1.37
SNHG12-203ENST00000464115 PLBD2Q8NHP8 589 aa23.62■■□□□ 1.37
SNHG12-203ENST00000464115 UTP14AQ9BVJ6 771 aaKnown RBP23.62■■□□□ 1.37
SNHG12-203ENST00000464115 TAOK3Q9H2K8 898 aa23.62■■□□□ 1.37
SNHG12-203ENST00000464115 CEP350Q5VT06 3117 aa23.62■■□□□ 1.37
SNHG12-203ENST00000464115 ELL2O00472 640 aaPredicted RBP23.61■■□□□ 1.37
SNHG12-203ENST00000464115 OLFM4Q6UX06 510 aa23.61■■□□□ 1.37
SNHG12-203ENST00000464115 ANKRD13DQ6ZTN6 518 aa23.61■■□□□ 1.37
SNHG12-203ENST00000464115 RNF123Q5XPI4 1314 aa23.6■■□□□ 1.37
SNHG12-203ENST00000464115 KDM2BQ8NHM5 1336 aa23.6■■□□□ 1.37
SNHG12-203ENST00000464115 ANKRD36CQ5JPF3 1778 aa23.6■■□□□ 1.37
SNHG12-203ENST00000464115 SNED1Q8TER0 1413 aa23.6■■□□□ 1.37
SNHG12-203ENST00000464115 CCDC88AQ3V6T2 1871 aa23.6■■□□□ 1.37
SNHG12-203ENST00000464115 GLTPD2A6NH11 291 aa23.59■■□□□ 1.37
SNHG12-203ENST00000464115 CCDC93Q567U6 631 aa23.59■■□□□ 1.37
SNHG12-203ENST00000464115 TSPYL6Q8N831 410 aa23.59■■□□□ 1.37
SNHG12-203ENST00000464115 TIAM2Q8IVF5 1701 aa23.59■■□□□ 1.37
SNHG12-203ENST00000464115 IL16Q14005 1332 aa23.59■■□□□ 1.37
SNHG12-203ENST00000464115 TOMM70O94826 608 aa23.58■■□□□ 1.37
SNHG12-203ENST00000464115 SYNE4Q8N205 404 aa23.58■■□□□ 1.37
SNHG12-203ENST00000464115 TSR2Q969E8 191 aaKnown RBP23.58■■□□□ 1.37
SNHG12-203ENST00000464115 CRAMP1Q96RY5 1269 aa23.58■■□□□ 1.37
SNHG12-203ENST00000464115 ISCA1Q9BUE6 129 aa23.58■■□□□ 1.37
SNHG12-203ENST00000464115 PHAXQ9H814 394 aaKnown RBP23.57■■□□□ 1.36
SNHG12-203ENST00000464115 RRAGCQ9HB90 399 aa23.57■■□□□ 1.36
SNHG12-203ENST00000464115 FKBP4Q02790 459 aaKnown RBP eCLIP23.56■■□□□ 1.36
SNHG12-203ENST00000464115 RTKN2Q8IZC4 609 aa23.56■■□□□ 1.36
SNHG12-203ENST00000464115 RPGRQ92834 1020 aaKnown RBP23.56■■□□□ 1.36
SNHG12-203ENST00000464115 NLRP3Q96P20 1036 aa23.56■■□□□ 1.36
SNHG12-203ENST00000464115 DICER1Q9UPY3 1922 aaKnown RBP23.56■■□□□ 1.36
SNHG12-203ENST00000464115 TRMT112Q9UI30 125 aaKnown RBP23.55■■□□□ 1.36
SNHG12-203ENST00000464115 TRIM28Q13263 835 aaKnown RBP23.54■■□□□ 1.36
SNHG12-203ENST00000464115 RBM17Q96I25 401 aaKnown RBP23.54■■□□□ 1.36
SNHG12-203ENST00000464115 SH3TC1Q8TE82 1336 aa23.54■■□□□ 1.36
SNHG12-203ENST00000464115 POTECB2RU33 542 aa23.53■■□□□ 1.36
SNHG12-203ENST00000464115 HCLS1P14317 486 aaPredicted RBP23.53■■□□□ 1.36
SNHG12-203ENST00000464115 CCDC30Q5VVM6 783 aa23.53■■□□□ 1.36
SNHG12-203ENST00000464115 SLC51AQ86UW1 340 aa23.53■■□□□ 1.36
SNHG12-203ENST00000464115 ATP5J2-PTCD1G3V325 749 aa23.52■■□□□ 1.36
SNHG12-203ENST00000464115 CC2D2BQ6DHV5 1058 aa23.52■■□□□ 1.36
SNHG12-203ENST00000464115 WDR63Q8IWG1 891 aa23.52■■□□□ 1.36
SNHG12-203ENST00000464115 PSMD1Q99460 953 aa23.52■■□□□ 1.36
SNHG12-203ENST00000464115 HSPA6P17066 643 aa23.51■■□□□ 1.35
SNHG12-203ENST00000464115 RBM46Q8TBY0 533 aaKnown RBP23.51■■□□□ 1.35
SNHG12-203ENST00000464115 ZNF428Q96B54 188 aa23.51■■□□□ 1.35
SNHG12-203ENST00000464115 CHMP4AQ9BY43 222 aa23.51■■□□□ 1.35
SNHG12-203ENST00000464115 ZNF277Q9NRM2 450 aaPredicted RBP23.51■■□□□ 1.35
SNHG12-203ENST00000464115 DPY19L2Q6NUT2 758 aa23.5■■□□□ 1.35
SNHG12-203ENST00000464115 ABCC4O15439 1325 aa23.5■■□□□ 1.35
SNHG12-203ENST00000464115 PPEF1O14829 653 aaPredicted RBP23.49■■□□□ 1.35
SNHG12-203ENST00000464115 VEGFAP15692 232 aaPredicted RBP23.49■■□□□ 1.35
SNHG12-203ENST00000464115 GOLGA2Q08379 1002 aa23.49■■□□□ 1.35
SNHG12-203ENST00000464115 RIC3Q7Z5B4 369 aa23.49■■□□□ 1.35
SNHG12-203ENST00000464115 FAM9BQ8IZU0 186 aa23.49■■□□□ 1.35
SNHG12-203ENST00000464115 FAM89AQ96GI7 184 aa23.49■■□□□ 1.35
SNHG12-203ENST00000464115 SALL2Q9Y467 1007 aaPredicted RBP23.49■■□□□ 1.35
SNHG12-203ENST00000464115 WDR90Q96KV7 1748 aa23.49■■□□□ 1.35
SNHG12-203ENST00000464115 FANCIQ9NVI1 1328 aa23.49■■□□□ 1.35
SNHG12-203ENST00000464115 LAMB2P55268 1798 aa23.49■■□□□ 1.35
SNHG12-203ENST00000464115 TWISTNBQ3B726 338 aaPredicted RBP23.48■■□□□ 1.35
SNHG12-203ENST00000464115 GRIPAP1Q4V328 841 aa23.48■■□□□ 1.35
SNHG12-203ENST00000464115 IARSP41252 1262 aaKnown RBP23.47■■□□□ 1.35
SNHG12-203ENST00000464115 SPINK5Q9NQ38 1064 aaPredicted RBP23.47■■□□□ 1.35
SNHG12-203ENST00000464115 ATP6V0A2Q9Y487 856 aa23.47■■□□□ 1.35
SNHG12-203ENST00000464115 DDX60Q8IY21 1712 aaKnown RBP23.47■■□□□ 1.35
SNHG12-203ENST00000464115 BBOX1O75936 387 aa23.46■■□□□ 1.35
SNHG12-203ENST00000464115 DDNO94850 711 aaPredicted RBP23.46■■□□□ 1.35
SNHG12-203ENST00000464115 C16orf71Q8IYS4 520 aaPredicted RBP23.46■■□□□ 1.35
SNHG12-203ENST00000464115 FZD9O00144 591 aa23.45■■□□□ 1.34
SNHG12-203ENST00000464115 FSTL1Q12841 308 aa23.45■■□□□ 1.34
SNHG12-203ENST00000464115 SF3B3Q15393 1217 aaKnown RBP23.45■■□□□ 1.34
SNHG12-203ENST00000464115 METTL22Q9BUU2 404 aaPredicted RBP23.45■■□□□ 1.34
SNHG12-203ENST00000464115 COL4A5P29400 1685 aa23.44■■□□□ 1.34
SNHG12-203ENST00000464115 TCERG1O14776 1098 aaKnown RBP23.44■■□□□ 1.34
SNHG12-203ENST00000464115 ZBTB38Q8NAP3 1195 aaPredicted RBP23.44■■□□□ 1.34
SNHG12-203ENST00000464115 MYD88Q99836 296 aa23.44■■□□□ 1.34
SNHG12-203ENST00000464115 VAMP4O75379 141 aa23.43■■□□□ 1.34
SNHG12-203ENST00000464115 DDX58O95786 925 aaKnown RBP23.43■■□□□ 1.34
SNHG12-203ENST00000464115 GRAPQ13588 217 aa23.43■■□□□ 1.34
SNHG12-203ENST00000464115 KSR2Q6VAB6 950 aa23.43■■□□□ 1.34
SNHG12-203ENST00000464115 G2E3Q7L622 706 aa23.43■■□□□ 1.34
SNHG12-203ENST00000464115 SP8Q8IXZ3 490 aa23.43■■□□□ 1.34
SNHG12-203ENST00000464115 CCDC191Q8NCU4 936 aa23.43■■□□□ 1.34
SNHG12-203ENST00000464115 GRAPLQ8TC17 118 aaPredicted RBP23.43■■□□□ 1.34
SNHG12-203ENST00000464115 MAP3K2Q9Y2U5 619 aa23.43■■□□□ 1.34
SNHG12-203ENST00000464115 ZNF521Q96K83 1311 aa23.42■■□□□ 1.34
SNHG12-203ENST00000464115 ZNF541Q9H0D2 1346 aa23.42■■□□□ 1.34
SNHG12-203ENST00000464115 IRS4O14654 1257 aaPredicted RBP23.42■■□□□ 1.34
SNHG12-203ENST00000464115 RTL5Q5HYW3 569 aaPredicted RBP23.42■■□□□ 1.34
SNHG12-203ENST00000464115 DDX46Q7L014 1031 aaKnown RBP23.42■■□□□ 1.34
SNHG12-203ENST00000464115 L3MBTL3Q96JM7 780 aaPredicted RBP23.42■■□□□ 1.34
SNHG12-203ENST00000464115 STK31Q9BXU1 1019 aa23.42■■□□□ 1.34
SNHG12-203ENST00000464115 RTFDC1Q9BY42 306 aaPredicted RBP23.42■■□□□ 1.34
SNHG12-203ENST00000464115 PI4KAP2A4QPH2 592 aa23.41■■□□□ 1.34
SNHG12-203ENST00000464115 SLC4A2P04920 1241 aa23.41■■□□□ 1.34
SNHG12-203ENST00000464115 PI4KAP1Q8N8J0 262 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms