RNA–Protein interactions for RNA: ENST00000464050.5

COMMD6-207, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 790 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-207ENST00000464050 PLBD2Q8NHP8 589 aa17.45■□□□□ 0.38
COMMD6-207ENST00000464050 RBM17Q96I25 401 aaKnown RBP17.45■□□□□ 0.38
COMMD6-207ENST00000464050 NLRP3Q96P20 1036 aa17.45■□□□□ 0.38
COMMD6-207ENST00000464050 ANKRD36CQ5JPF3 1778 aa17.45■□□□□ 0.38
COMMD6-207ENST00000464050 RNF123Q5XPI4 1314 aa17.45■□□□□ 0.38
COMMD6-207ENST00000464050 KLRG2A4D1S0 409 aaPredicted RBP17.44■□□□□ 0.38
COMMD6-207ENST00000464050 TCIRG1Q13488 830 aa17.44■□□□□ 0.38
COMMD6-207ENST00000464050 CCDC30Q5VVM6 783 aa17.44■□□□□ 0.38
COMMD6-207ENST00000464050 ANKRD13DQ6ZTN6 518 aa17.44■□□□□ 0.38
COMMD6-207ENST00000464050 WWC1Q8IX03 1113 aa17.44■□□□□ 0.38
COMMD6-207ENST00000464050 NMRK2Q9NPI5 230 aa17.44■□□□□ 0.38
COMMD6-207ENST00000464050 TRMT112Q9UI30 125 aaKnown RBP17.44■□□□□ 0.38
COMMD6-207ENST00000464050 TNRC6CQ9HCJ0 1690 aaKnown RBP17.43■□□□□ 0.38
COMMD6-207ENST00000464050 DPY19L2Q6NUT2 758 aa17.43■□□□□ 0.38
COMMD6-207ENST00000464050 RIC3Q7Z5B4 369 aa17.43■□□□□ 0.38
COMMD6-207ENST00000464050 RTKN2Q8IZC4 609 aa17.43■□□□□ 0.38
COMMD6-207ENST00000464050 TSR2Q969E8 191 aaKnown RBP17.43■□□□□ 0.38
COMMD6-207ENST00000464050 STK31Q9BXU1 1019 aa17.43■□□□□ 0.38
COMMD6-207ENST00000464050 RIC1Q4ADV7 1423 aa17.43■□□□□ 0.38
COMMD6-207ENST00000464050 TIAM2Q8IVF5 1701 aa17.43■□□□□ 0.38
COMMD6-207ENST00000464050 FER1L6Q2WGJ9 1857 aa17.43■□□□□ 0.38
COMMD6-207ENST00000464050 LTBP3Q9NS15 1303 aa17.43■□□□□ 0.38
COMMD6-207ENST00000464050 DDX58O95786 925 aaKnown RBP17.42■□□□□ 0.38
COMMD6-207ENST00000464050 CRY2Q49AN0 593 aa17.42■□□□□ 0.38
COMMD6-207ENST00000464050 NLRP10Q86W26 655 aa17.42■□□□□ 0.38
COMMD6-207ENST00000464050 SH3TC1Q8TE82 1336 aa17.42■□□□□ 0.38
COMMD6-207ENST00000464050 KIF3CO14782 793 aa17.41■□□□□ 0.38
COMMD6-207ENST00000464050 C8orf58Q8NAV2 365 aa17.41■□□□□ 0.38
COMMD6-207ENST00000464050 IL16Q14005 1332 aa17.41■□□□□ 0.38
COMMD6-207ENST00000464050 FKBP4Q02790 459 aaKnown RBP eCLIP17.4■□□□□ 0.38
COMMD6-207ENST00000464050 CC2D2BQ6DHV5 1058 aa17.4■□□□□ 0.38
COMMD6-207ENST00000464050 RRAGCQ9HB90 399 aa17.4■□□□□ 0.38
COMMD6-207ENST00000464050 DICER1Q9UPY3 1922 aaKnown RBP17.39■□□□□ 0.37
COMMD6-207ENST00000464050 GLTPD2A6NH11 291 aa17.39■□□□□ 0.37
COMMD6-207ENST00000464050 ATP5J2-PTCD1G3V325 749 aa17.39■□□□□ 0.37
COMMD6-207ENST00000464050 TCERG1O14776 1098 aaKnown RBP17.39■□□□□ 0.37
COMMD6-207ENST00000464050 PPEF1O14829 653 aaPredicted RBP17.39■□□□□ 0.37
COMMD6-207ENST00000464050 HCLS1P14317 486 aaPredicted RBP17.39■□□□□ 0.37
COMMD6-207ENST00000464050 NCBP3Q53F19 620 aaKnown RBP17.39■□□□□ 0.37
COMMD6-207ENST00000464050 ZNF428Q96B54 188 aa17.39■□□□□ 0.37
COMMD6-207ENST00000464050 CRAMP1Q96RY5 1269 aa17.39■□□□□ 0.37
COMMD6-207ENST00000464050 TOMM70O94826 608 aa17.38■□□□□ 0.37
COMMD6-207ENST00000464050 HOXA10P31260 410 aaPredicted RBP17.38■□□□□ 0.37
COMMD6-207ENST00000464050 PRELPP51888 382 aa17.38■□□□□ 0.37
COMMD6-207ENST00000464050 TWISTNBQ3B726 338 aaPredicted RBP17.38■□□□□ 0.37
COMMD6-207ENST00000464050 DDX46Q7L014 1031 aaKnown RBP17.38■□□□□ 0.37
COMMD6-207ENST00000464050 C7orf43Q8WVR3 580 aa17.38■□□□□ 0.37
COMMD6-207ENST00000464050 ZNF277Q9NRM2 450 aaPredicted RBP17.38■□□□□ 0.37
COMMD6-207ENST00000464050 HSP90B1P14625 803 aaKnown RBP17.37■□□□□ 0.37
COMMD6-207ENST00000464050 GRIPAP1Q4V328 841 aa17.37■□□□□ 0.37
COMMD6-207ENST00000464050 SLC10A5Q5PT55 438 aa17.37■□□□□ 0.37
COMMD6-207ENST00000464050 OLFM4Q6UX06 510 aa17.37■□□□□ 0.37
COMMD6-207ENST00000464050 WDR63Q8IWG1 891 aa17.37■□□□□ 0.37
COMMD6-207ENST00000464050 TSPYL6Q8N831 410 aa17.37■□□□□ 0.37
COMMD6-207ENST00000464050 PHAXQ9H814 394 aaKnown RBP17.37■□□□□ 0.37
COMMD6-207ENST00000464050 C3orf67Q6ZVT6 689 aa17.36■□□□□ 0.37
COMMD6-207ENST00000464050 SYNE4Q8N205 404 aa17.36■□□□□ 0.37
COMMD6-207ENST00000464050 JDP2Q8WYK2 163 aa17.36■□□□□ 0.37
COMMD6-207ENST00000464050 MYD88Q99836 296 aa17.36■□□□□ 0.37
COMMD6-207ENST00000464050 ISCA1Q9BUE6 129 aa17.36■□□□□ 0.37
COMMD6-207ENST00000464050 VEGFAP15692 232 aaPredicted RBP17.35■□□□□ 0.37
COMMD6-207ENST00000464050 NEXNQ0ZGT2 675 aa17.35■□□□□ 0.37
COMMD6-207ENST00000464050 RTL5Q5HYW3 569 aaPredicted RBP17.35■□□□□ 0.37
COMMD6-207ENST00000464050 RBM46Q8TBY0 533 aaKnown RBP17.35■□□□□ 0.37
COMMD6-207ENST00000464050 FAM89AQ96GI7 184 aa17.35■□□□□ 0.37
COMMD6-207ENST00000464050 MYH16Q9H6N6 1097 aa17.35■□□□□ 0.37
COMMD6-207ENST00000464050 FANCIQ9NVI1 1328 aa17.35■□□□□ 0.37
COMMD6-207ENST00000464050 ABCC4O15439 1325 aa17.34■□□□□ 0.37
COMMD6-207ENST00000464050 HSPA6P17066 643 aa17.34■□□□□ 0.37
COMMD6-207ENST00000464050 IARSP41252 1262 aaKnown RBP17.34■□□□□ 0.37
COMMD6-207ENST00000464050 PSMD1Q99460 953 aa17.34■□□□□ 0.37
COMMD6-207ENST00000464050 CWC25Q9NXE8 425 aaPredicted RBP17.33■□□□□ 0.36
COMMD6-207ENST00000464050 IRS4O14654 1257 aaPredicted RBP17.32■□□□□ 0.36
COMMD6-207ENST00000464050 BBOX1O75936 387 aa17.32■□□□□ 0.36
COMMD6-207ENST00000464050 SLC4A2P04920 1241 aa17.32■□□□□ 0.36
COMMD6-207ENST00000464050 TRIM28Q13263 835 aaKnown RBP17.32■□□□□ 0.36
COMMD6-207ENST00000464050 GRAPQ13588 217 aa17.32■□□□□ 0.36
COMMD6-207ENST00000464050 LARGE2Q8N3Y3 721 aa17.32■□□□□ 0.36
COMMD6-207ENST00000464050 SMC1BQ8NDV3 1235 aa17.32■□□□□ 0.36
COMMD6-207ENST00000464050 GRAPLQ8TC17 118 aaPredicted RBP17.32■□□□□ 0.36
COMMD6-207ENST00000464050 MAP3K2Q9Y2U5 619 aa17.32■□□□□ 0.36
COMMD6-207ENST00000464050 LAMB2P55268 1798 aa17.32■□□□□ 0.36
COMMD6-207ENST00000464050 EIF6P56537 245 aaKnown RBP17.31■□□□□ 0.36
COMMD6-207ENST00000464050 KSR2Q6VAB6 950 aa17.31■□□□□ 0.36
COMMD6-207ENST00000464050 CCDC191Q8NCU4 936 aa17.31■□□□□ 0.36
COMMD6-207ENST00000464050 SUPT20HQ8NEM7 779 aa17.31■□□□□ 0.36
COMMD6-207ENST00000464050 METTL22Q9BUU2 404 aaPredicted RBP17.31■□□□□ 0.36
COMMD6-207ENST00000464050 ATP6V0A2Q9Y487 856 aa17.31■□□□□ 0.36
COMMD6-207ENST00000464050 CACNA1FO60840 1977 aa17.3■□□□□ 0.36
COMMD6-207ENST00000464050 PI4KAP2A4QPH2 592 aa17.3■□□□□ 0.36
COMMD6-207ENST00000464050 IQCA1LA6NCM1 817 aa17.3■□□□□ 0.36
COMMD6-207ENST00000464050 DDNO94850 711 aaPredicted RBP17.3■□□□□ 0.36
COMMD6-207ENST00000464050 EXOSC9Q06265 439 aaKnown RBP17.3■□□□□ 0.36
COMMD6-207ENST00000464050 FSTL1Q12841 308 aa17.3■□□□□ 0.36
COMMD6-207ENST00000464050 DPP8Q6V1X1 898 aaPredicted RBP17.3■□□□□ 0.36
COMMD6-207ENST00000464050 TMC4Q7Z404 712 aa17.3■□□□□ 0.36
COMMD6-207ENST00000464050 NIM1KQ8IY84 436 aa17.3■□□□□ 0.36
COMMD6-207ENST00000464050 PI4KAP1Q8N8J0 262 aa17.3■□□□□ 0.36
COMMD6-207ENST00000464050 ZBTB38Q8NAP3 1195 aaPredicted RBP17.3■□□□□ 0.36
COMMD6-207ENST00000464050 PPIP5K2O43314 1243 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms