RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 TNS3Q68CZ2 1445 aa4.45□□□□□ -1.7
COL8A1-205ENST00000463753 SLIT3O75094 1523 aa4.45□□□□□ -1.7
COL8A1-205ENST00000463753 NRXN1Q9ULB1 1477 aa4.45□□□□□ -1.7
COL8A1-205ENST00000463753 LAMB1P07942 1786 aa4.45□□□□□ -1.7
COL8A1-205ENST00000463753 GTF2A1P52655 376 aaPredicted RBP4.44□□□□□ -1.7
COL8A1-205ENST00000463753 KANK4Q5T7N3 995 aaPredicted RBP4.44□□□□□ -1.7
COL8A1-205ENST00000463753 NBPF3Q9H094 633 aa4.44□□□□□ -1.7
COL8A1-205ENST00000463753 RGPD8O14715 1765 aaPredicted RBP4.44□□□□□ -1.7
COL8A1-205ENST00000463753 RGPD5Q99666 1765 aa4.44□□□□□ -1.7
COL8A1-205ENST00000463753 SYNGAP1Q96PV0 1343 aa4.44□□□□□ -1.7
COL8A1-205ENST00000463753 TUBGCP6Q96RT7 1819 aa4.44□□□□□ -1.7
COL8A1-205ENST00000463753 DDX11L8A8MPP1 907 aa4.44□□□□□ -1.7
COL8A1-205ENST00000463753 TRIM66O15016 1216 aa4.44□□□□□ -1.7
COL8A1-205ENST00000463753 GRIPAP1Q4V328 841 aa4.44□□□□□ -1.7
COL8A1-205ENST00000463753 TICAM2Q86XR7 235 aa4.44□□□□□ -1.7
COL8A1-205ENST00000463753 PLCD4Q9BRC7 762 aa4.44□□□□□ -1.7
COL8A1-205ENST00000463753 TBC1D2Q9BYX2 928 aa4.44□□□□□ -1.7
COL8A1-205ENST00000463753 ISY1Q9ULR0 285 aaKnown RBP4.44□□□□□ -1.7
COL8A1-205ENST00000463753 EIF3AQ14152 1382 aaKnown RBP4.44□□□□□ -1.7
COL8A1-205ENST00000463753 OVOS2A0A0J9YW53 1432 aa4.44□□□□□ -1.7
COL8A1-205ENST00000463753 OVOS2Q6IE36 1432 aa4.44□□□□□ -1.7
COL8A1-205ENST00000463753 VPS8Q8N3P4 1428 aa4.44□□□□□ -1.7
COL8A1-205ENST00000463753 ZNF500O60304 480 aaPredicted RBP4.44□□□□□ -1.7
COL8A1-205ENST00000463753 RBM25P49756 843 aaKnown RBP4.44□□□□□ -1.7
COL8A1-205ENST00000463753 PPP1R9BQ96SB3 815 aa4.44□□□□□ -1.7
COL8A1-205ENST00000463753 CARD10Q9BWT7 1032 aa4.44□□□□□ -1.7
COL8A1-205ENST00000463753 TMEM134Q9H6X4 195 aa4.44□□□□□ -1.7
COL8A1-205ENST00000463753 NOL7Q9UMY1 257 aaKnown RBP4.44□□□□□ -1.7
COL8A1-205ENST00000463753 DNAJB2P25686 324 aa4.43□□□□□ -1.7
COL8A1-205ENST00000463753 LTKP29376 864 aa4.43□□□□□ -1.7
COL8A1-205ENST00000463753 CT47A1Q5JQC4 288 aaPredicted RBP4.43□□□□□ -1.7
COL8A1-205ENST00000463753 NUDT18Q6ZVK8 323 aa4.43□□□□□ -1.7
COL8A1-205ENST00000463753 EGFL6Q8IUX8 553 aa4.43□□□□□ -1.7
COL8A1-205ENST00000463753 SPNS2Q8IVW8 549 aa4.43□□□□□ -1.7
COL8A1-205ENST00000463753 MYRIPQ8NFW9 859 aa4.43□□□□□ -1.7
COL8A1-205ENST00000463753 PHOX2BQ99453 314 aa4.43□□□□□ -1.7
COL8A1-205ENST00000463753 RSPH14Q9UHP6 348 aa4.43□□□□□ -1.7
COL8A1-205ENST00000463753 KANK1Q14678 1352 aa4.43□□□□□ -1.7
COL8A1-205ENST00000463753 RGL3Q3MIN7 710 aa4.43□□□□□ -1.7
COL8A1-205ENST00000463753 TPRNQ4KMQ1 711 aa4.43□□□□□ -1.7
COL8A1-205ENST00000463753 CHMP5Q9NZZ3 219 aa4.43□□□□□ -1.7
COL8A1-205ENST00000463753 PNMA3Q9UL41 463 aa4.43□□□□□ -1.7
COL8A1-205ENST00000463753 DLEC1Q9Y238 1755 aa4.42□□□□□ -1.7
COL8A1-205ENST00000463753 GOLIM4O00461 696 aa4.42□□□□□ -1.7
COL8A1-205ENST00000463753 CENPQQ7L2Z9 268 aaPredicted RBP4.42□□□□□ -1.7
COL8A1-205ENST00000463753 YY1AP1Q9H869 796 aa4.42□□□□□ -1.7
COL8A1-205ENST00000463753 ZKSCAN5Q9Y2L8 839 aa4.42□□□□□ -1.7
COL8A1-205ENST00000463753 SLC24A3Q9HC58 644 aa4.42□□□□□ -1.7
COL8A1-205ENST00000463753 CALCOCO1Q9P1Z2 691 aa4.42□□□□□ -1.7
COL8A1-205ENST00000463753 PPP1R1BQ9UD71 204 aaPredicted RBP4.42□□□□□ -1.7
COL8A1-205ENST00000463753 RCCD1A6NED2 376 aa4.41□□□□□ -1.7
COL8A1-205ENST00000463753 SRPK2P78362 688 aaKnown RBP4.41□□□□□ -1.7
COL8A1-205ENST00000463753 SEMA3FQ13275 785 aa4.41□□□□□ -1.7
COL8A1-205ENST00000463753 CDCA8Q53HL2 280 aa4.41□□□□□ -1.7
COL8A1-205ENST00000463753 MYCBPQ99417 103 aaPredicted RBP4.41□□□□□ -1.7
COL8A1-205ENST00000463753 FEZ2Q9UHY8 353 aaPredicted RBP4.41□□□□□ -1.7
COL8A1-205ENST00000463753 SPATA31A5Q5VU36 1347 aa4.41□□□□□ -1.7
COL8A1-205ENST00000463753 SPATA31A7Q8IWB4 1347 aa4.41□□□□□ -1.7
COL8A1-205ENST00000463753 CCNB3Q8WWL7 1395 aa4.41□□□□□ -1.7
COL8A1-205ENST00000463753 FAM50AQ14320 339 aaKnown RBP4.41□□□□□ -1.7
COL8A1-205ENST00000463753 SEPT12Q8IYM1 358 aa4.41□□□□□ -1.7
COL8A1-205ENST00000463753 TSPYL1Q9H0U9 437 aa4.41□□□□□ -1.7
COL8A1-205ENST00000463753 SOWAHBA6NEL2 793 aa4.41□□□□□ -1.7
COL8A1-205ENST00000463753 CTCFP49711 727 aaPredicted RBP4.41□□□□□ -1.7
COL8A1-205ENST00000463753 EIF4G2P78344 907 aaKnown RBP eCLIP4.41□□□□□ -1.7
COL8A1-205ENST00000463753 KIAA2012Q0VF49 1180 aa4.41□□□□□ -1.7
COL8A1-205ENST00000463753 MRPL50Q8N5N7 158 aaKnown RBP4.41□□□□□ -1.7
COL8A1-205ENST00000463753 SMC4Q9NTJ3 1288 aa4.41□□□□□ -1.7
COL8A1-205ENST00000463753 CEP83Q9Y592 693 aa4.41□□□□□ -1.7
COL8A1-205ENST00000463753 ADAMTSL1Q8N6G6 1762 aa4.41□□□□□ -1.7
COL8A1-205ENST00000463753 DICER1Q9UPY3 1922 aaKnown RBP4.4□□□□□ -1.7
COL8A1-205ENST00000463753 KDM6AO15550 1401 aaPredicted RBP4.4□□□□□ -1.7
COL8A1-205ENST00000463753 TULP2O00295 520 aa4.4□□□□□ -1.7
COL8A1-205ENST00000463753 SLFN14P0C7P3 912 aa4.4□□□□□ -1.7
COL8A1-205ENST00000463753 GYS2P54840 703 aa4.4□□□□□ -1.7
COL8A1-205ENST00000463753 DNAJC21Q5F1R6 531 aaKnown RBP4.4□□□□□ -1.7
COL8A1-205ENST00000463753 ANKRD13DQ6ZTN6 518 aa4.4□□□□□ -1.7
COL8A1-205ENST00000463753 C17orf53Q8N3J3 647 aaPredicted RBP4.4□□□□□ -1.7
COL8A1-205ENST00000463753 RNF217Q8TC41 542 aa4.4□□□□□ -1.7
COL8A1-205ENST00000463753 NECTIN2Q92692 538 aa4.4□□□□□ -1.7
COL8A1-205ENST00000463753 ZFRQ96KR1 1074 aaKnown RBP4.4□□□□□ -1.7
COL8A1-205ENST00000463753 CDCA7Q9BWT1 371 aaPredicted RBP4.4□□□□□ -1.7
COL8A1-205ENST00000463753 EFCC1Q9HA90 598 aa4.4□□□□□ -1.7
COL8A1-205ENST00000463753 ARFGEF2Q9Y6D5 1785 aa4.4□□□□□ -1.71
COL8A1-205ENST00000463753 MCCP23508 829 aa4.4□□□□□ -1.71
COL8A1-205ENST00000463753 GABPB1Q06547 395 aaPredicted RBP4.4□□□□□ -1.71
COL8A1-205ENST00000463753 PDE4DQ08499 809 aa4.4□□□□□ -1.71
COL8A1-205ENST00000463753 OGFRQ9NZT2 677 aa4.4□□□□□ -1.71
COL8A1-205ENST00000463753 SH3BP1Q9Y3L3 701 aa4.4□□□□□ -1.71
COL8A1-205ENST00000463753 CD2APQ9Y5K6 639 aa4.4□□□□□ -1.71
COL8A1-205ENST00000463753 DDX49Q9Y6V7 483 aaKnown RBP4.4□□□□□ -1.71
COL8A1-205ENST00000463753 KDM2BQ8NHM5 1336 aa4.4□□□□□ -1.71
COL8A1-205ENST00000463753 HNRNPMP52272 730 aaKnown RBP eCLIP4.39□□□□□ -1.71
COL8A1-205ENST00000463753 HMGN5P82970 282 aaKnown RBP4.39□□□□□ -1.71
COL8A1-205ENST00000463753 NYAP1Q6ZVC0 841 aa4.39□□□□□ -1.71
COL8A1-205ENST00000463753 TNPO1Q92973 898 aaKnown RBP4.39□□□□□ -1.71
COL8A1-205ENST00000463753 DRC1Q96MC2 740 aa4.39□□□□□ -1.71
COL8A1-205ENST00000463753 GBP4Q96PP9 640 aa4.39□□□□□ -1.71
COL8A1-205ENST00000463753 GPCPD1Q9NPB8 672 aa4.39□□□□□ -1.71
COL8A1-205ENST00000463753 DHX16O60231 1041 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms