RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 TMEM151AQ8N4L1 468 aa6.09□□□□□ -1.44
SCFD1-204ENST00000463622 STRN4Q9NRL3 753 aa6.09□□□□□ -1.44
SCFD1-204ENST00000463622 GGA1Q9UJY5 639 aa6.09□□□□□ -1.44
SCFD1-204ENST00000463622 DNMT3AQ9Y6K1 912 aaPredicted RBP6.09□□□□□ -1.44
SCFD1-204ENST00000463622 PHLDB1Q86UU1 1377 aa6.09□□□□□ -1.44
SCFD1-204ENST00000463622 PTPRMP28827 1452 aa6.09□□□□□ -1.44
SCFD1-204ENST00000463622 KANK4Q5T7N3 995 aaPredicted RBP6.08□□□□□ -1.44
SCFD1-204ENST00000463622 SIX5Q8N196 739 aa6.08□□□□□ -1.44
SCFD1-204ENST00000463622 ARAP3Q8WWN8 1544 aa6.08□□□□□ -1.44
SCFD1-204ENST00000463622 SCARF2Q96GP6 870 aaPredicted RBP6.08□□□□□ -1.44
SCFD1-204ENST00000463622 RBM19Q9Y4C8 960 aaKnown RBP6.08□□□□□ -1.44
SCFD1-204ENST00000463622 NEURL1BA8MQ27 555 aa6.07□□□□□ -1.44
SCFD1-204ENST00000463622 EML1O00423 815 aa6.07□□□□□ -1.44
SCFD1-204ENST00000463622 C21orf2O43822 256 aa6.07□□□□□ -1.44
SCFD1-204ENST00000463622 SNRPNP63162 240 aaKnown RBP6.07□□□□□ -1.44
SCFD1-204ENST00000463622 C7orf43Q8WVR3 580 aa6.07□□□□□ -1.44
SCFD1-204ENST00000463622 EDARADDQ8WWZ3 215 aa6.07□□□□□ -1.44
SCFD1-204ENST00000463622 UGGT2Q9NYU1 1516 aa6.07□□□□□ -1.44
SCFD1-204ENST00000463622 RNF225M0QZC1 329 aaPredicted RBP6.07□□□□□ -1.44
SCFD1-204ENST00000463622 PPP1R12BO60237 982 aaPredicted RBP6.07□□□□□ -1.44
SCFD1-204ENST00000463622 RFX1P22670 979 aa6.07□□□□□ -1.44
SCFD1-204ENST00000463622 DPYDQ12882 1025 aa6.07□□□□□ -1.44
SCFD1-204ENST00000463622 LARP1Q6PKG0 1096 aaKnown RBP6.07□□□□□ -1.44
SCFD1-204ENST00000463622 SCG3Q8WXD2 468 aaKnown RBP6.07□□□□□ -1.44
SCFD1-204ENST00000463622 HINFPQ9BQA5 517 aa6.07□□□□□ -1.44
SCFD1-204ENST00000463622 CUL7Q14999 1698 aa6.07□□□□□ -1.44
SCFD1-204ENST00000463622 ATAD2Q6PL18 1390 aa6.06□□□□□ -1.44
SCFD1-204ENST00000463622 RAPGEF3O95398 923 aa6.06□□□□□ -1.44
SCFD1-204ENST00000463622 SEC13P55735 322 aa6.06□□□□□ -1.44
SCFD1-204ENST00000463622 PCBP4P57723 403 aaKnown RBP6.06□□□□□ -1.44
SCFD1-204ENST00000463622 PSMA6P60900 246 aaKnown RBP6.06□□□□□ -1.44
SCFD1-204ENST00000463622 PTK7Q13308 1070 aa6.06□□□□□ -1.44
SCFD1-204ENST00000463622 RHPN1Q8TCX5 695 aa6.06□□□□□ -1.44
SCFD1-204ENST00000463622 HSH2DQ96JZ2 352 aa6.06□□□□□ -1.44
SCFD1-204ENST00000463622 PHACTR1Q9C0D0 580 aa6.06□□□□□ -1.44
SCFD1-204ENST00000463622 RRAGCQ9HB90 399 aa6.06□□□□□ -1.44
SCFD1-204ENST00000463622 NEUROD4Q9HD90 331 aa6.06□□□□□ -1.44
SCFD1-204ENST00000463622 KLF15Q9UIH9 416 aa6.06□□□□□ -1.44
SCFD1-204ENST00000463622 IQGAP2Q13576 1575 aa6.06□□□□□ -1.44
SCFD1-204ENST00000463622 NGLY1Q96IV0 654 aa6.05□□□□□ -1.44
SCFD1-204ENST00000463622 VRTNQ9H8Y1 702 aa6.05□□□□□ -1.44
SCFD1-204ENST00000463622 GDF2Q9UK05 429 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-204ENST00000463622 AMPD1P23109 780 aa6.05□□□□□ -1.44
SCFD1-204ENST00000463622 HSPA2P54652 639 aa6.05□□□□□ -1.44
SCFD1-204ENST00000463622 SFSWAPQ12872 951 aaKnown RBP6.05□□□□□ -1.44
SCFD1-204ENST00000463622 CFAP70Q5T0N1 1121 aa6.05□□□□□ -1.44
SCFD1-204ENST00000463622 GOLGA6L1Q8N7Z2 621 aa6.05□□□□□ -1.44
SCFD1-204ENST00000463622 ZNF280CQ8ND82 737 aa6.05□□□□□ -1.44
SCFD1-204ENST00000463622 USP17L15C9J2P7 530 aa6.04□□□□□ -1.44
SCFD1-204ENST00000463622 USP17L10C9JJH3 530 aa6.04□□□□□ -1.44
SCFD1-204ENST00000463622 USP17L13C9JLJ4 530 aa6.04□□□□□ -1.44
SCFD1-204ENST00000463622 USP17L12C9JPN9 530 aa6.04□□□□□ -1.44
SCFD1-204ENST00000463622 USP17L11C9JVI0 530 aa6.04□□□□□ -1.44
SCFD1-204ENST00000463622 USP17L21D6R901 530 aa6.04□□□□□ -1.44
SCFD1-204ENST00000463622 USP17L18D6R9N7 530 aa6.04□□□□□ -1.44
SCFD1-204ENST00000463622 USP17L22D6RA61 530 aa6.04□□□□□ -1.44
SCFD1-204ENST00000463622 USP17L17D6RBQ6 530 aa6.04□□□□□ -1.44
SCFD1-204ENST00000463622 USP17L19D6RCP7 530 aa6.04□□□□□ -1.44
SCFD1-204ENST00000463622 USP17L20D6RJB6 530 aa6.04□□□□□ -1.44
SCFD1-204ENST00000463622 M0R2N6 131 aa6.04□□□□□ -1.44
SCFD1-204ENST00000463622 FAM157BP0CG42 384 aa6.04□□□□□ -1.44
SCFD1-204ENST00000463622 USP17L24Q0WX57 530 aa6.04□□□□□ -1.44
SCFD1-204ENST00000463622 BEND7Q8N7W2 519 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-204ENST00000463622 MARK1Q9P0L2 795 aa6.04□□□□□ -1.44
SCFD1-204ENST00000463622 PRR12Q9ULL5 1215 aa6.04□□□□□ -1.44
SCFD1-204ENST00000463622 CHMP3Q9Y3E7 222 aa6.04□□□□□ -1.44
SCFD1-204ENST00000463622 EFSO43281 561 aa6.03□□□□□ -1.44
SCFD1-204ENST00000463622 PODNQ7Z5L7 613 aa6.03□□□□□ -1.44
SCFD1-204ENST00000463622 ANKMY2Q8IV38 441 aa6.03□□□□□ -1.44
SCFD1-204ENST00000463622 ZCCHC11Q5TAX3 1644 aaKnown RBP6.03□□□□□ -1.44
SCFD1-204ENST00000463622 ADAMTSL3P82987 1691 aa6.03□□□□□ -1.44
SCFD1-204ENST00000463622 RAPGEF2Q9Y4G8 1499 aa6.03□□□□□ -1.44
SCFD1-204ENST00000463622 ARAFP10398 606 aa6.03□□□□□ -1.44
SCFD1-204ENST00000463622 EPXP11678 715 aa6.03□□□□□ -1.44
SCFD1-204ENST00000463622 SAMD5Q5TGI4 173 aa6.03□□□□□ -1.44
SCFD1-204ENST00000463622 SLCO4C1Q6ZQN7 724 aa6.03□□□□□ -1.44
SCFD1-204ENST00000463622 FCHSD1Q86WN1 690 aa6.03□□□□□ -1.44
SCFD1-204ENST00000463622 ALDH16A1Q8IZ83 802 aa6.03□□□□□ -1.44
SCFD1-204ENST00000463622 BTBD6Q96KE9 485 aa6.03□□□□□ -1.44
SCFD1-204ENST00000463622 LRRC4BQ9NT99 713 aa6.03□□□□□ -1.44
SCFD1-204ENST00000463622 PCF11O94913 1555 aaKnown RBP6.03□□□□□ -1.44
SCFD1-204ENST00000463622 DISP3Q9P2K9 1392 aa6.02□□□□□ -1.44
SCFD1-204ENST00000463622 ARID4BQ4LE39 1312 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-204ENST00000463622 GPAT2Q6NUI2 795 aa6.02□□□□□ -1.45
SCFD1-204ENST00000463622 KANK3Q6NY19 840 aa6.02□□□□□ -1.45
SCFD1-204ENST00000463622 RAB44Q7Z6P3 723 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-204ENST00000463622 CEP63Q96MT8 703 aa6.02□□□□□ -1.45
SCFD1-204ENST00000463622 SLC30A3Q99726 388 aa6.02□□□□□ -1.45
SCFD1-204ENST00000463622 C2orf49Q9BVC5 232 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-204ENST00000463622 FAM196BA6NMK8 535 aa6.01□□□□□ -1.45
SCFD1-204ENST00000463622 PHF20L1A8MW92 1017 aa6.01□□□□□ -1.45
SCFD1-204ENST00000463622 HOXB4P17483 251 aaPredicted RBP6.01□□□□□ -1.45
SCFD1-204ENST00000463622 FAM182BQ5T319 152 aa6.01□□□□□ -1.45
SCFD1-204ENST00000463622 SUSD3Q96L08 255 aa6.01□□□□□ -1.45
SCFD1-204ENST00000463622 ARXQ96QS3 562 aa6.01□□□□□ -1.45
SCFD1-204ENST00000463622 ATP10BO94823 1461 aa6.01□□□□□ -1.45
SCFD1-204ENST00000463622 ADH6P28332 368 aa6.01□□□□□ -1.45
SCFD1-204ENST00000463622 C1orf53Q5VUE5 145 aa6.01□□□□□ -1.45
SCFD1-204ENST00000463622 POTEAQ6S8J7 498 aa6.01□□□□□ -1.45
SCFD1-204ENST00000463622 DCAF5Q96JK2 942 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms