RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 NBPF5PQ86XG9 351 aaPredicted RBP9.23□□□□□ -0.93
EPHA4-210ENST00000463446 PELP1Q8IZL8 1130 aaKnown RBP9.23□□□□□ -0.93
EPHA4-210ENST00000463446 GCC1Q96CN9 775 aa9.23□□□□□ -0.93
EPHA4-210ENST00000463446 NLRP3Q96P20 1036 aa9.23□□□□□ -0.93
EPHA4-210ENST00000463446 CRBNQ96SW2 442 aa9.23□□□□□ -0.93
EPHA4-210ENST00000463446 TMX4Q9H1E5 349 aaPredicted RBP9.23□□□□□ -0.93
EPHA4-210ENST00000463446 FBXO3Q9UK99 471 aa9.23□□□□□ -0.93
EPHA4-210ENST00000463446 SH3TC1Q8TE82 1336 aa9.23□□□□□ -0.93
EPHA4-210ENST00000463446 ADCY9O60503 1353 aa9.23□□□□□ -0.93
EPHA4-210ENST00000463446 LY75O60449 1722 aa9.22□□□□□ -0.93
EPHA4-210ENST00000463446 ATP5J2-PTCD1G3V325 749 aa9.22□□□□□ -0.93
EPHA4-210ENST00000463446 PDE8AO60658 829 aa9.22□□□□□ -0.93
EPHA4-210ENST00000463446 POLD1P28340 1107 aa9.22□□□□□ -0.93
EPHA4-210ENST00000463446 PIP4K2AP48426 406 aaPredicted RBP9.22□□□□□ -0.93
EPHA4-210ENST00000463446 KCNQ4P56696 695 aa9.22□□□□□ -0.93
EPHA4-210ENST00000463446 ATP8B2P98198 1209 aa9.22□□□□□ -0.93
EPHA4-210ENST00000463446 PLA2G12BQ9BX93 195 aa9.22□□□□□ -0.93
EPHA4-210ENST00000463446 CDHR2Q9BYE9 1310 aa9.22□□□□□ -0.93
EPHA4-210ENST00000463446 CARMIL3Q8ND23 1372 aa9.22□□□□□ -0.93
EPHA4-210ENST00000463446 RAB11FIP3O75154 756 aa9.21□□□□□ -0.94
EPHA4-210ENST00000463446 IGKV5-2P06315 115 aa9.21□□□□□ -0.94
EPHA4-210ENST00000463446 RLBP1P12271 317 aa9.21□□□□□ -0.94
EPHA4-210ENST00000463446 TM4SF1P30408 202 aa9.21□□□□□ -0.94
EPHA4-210ENST00000463446 PDE6BP35913 854 aa9.21□□□□□ -0.94
EPHA4-210ENST00000463446 HDAC1Q13547 482 aaPredicted RBP9.21□□□□□ -0.94
EPHA4-210ENST00000463446 HLFQ16534 295 aa9.21□□□□□ -0.94
EPHA4-210ENST00000463446 CCDC57Q2TAC2 916 aa9.21□□□□□ -0.94
EPHA4-210ENST00000463446 CWF19L2Q2TBE0 894 aaKnown RBP9.21□□□□□ -0.94
EPHA4-210ENST00000463446 CCDC152Q4G0S7 254 aa9.21□□□□□ -0.94
EPHA4-210ENST00000463446 C20orf194Q5TEA3 1177 aa9.21□□□□□ -0.94
EPHA4-210ENST00000463446 DEFB132Q7Z7B7 95 aa9.21□□□□□ -0.94
EPHA4-210ENST00000463446 ERC1Q8IUD2 1116 aa9.21□□□□□ -0.94
EPHA4-210ENST00000463446 EXOC6Q8TAG9 804 aa9.21□□□□□ -0.94
EPHA4-210ENST00000463446 U3KPZ7 1027 aaPredicted RBP9.21□□□□□ -0.94
EPHA4-210ENST00000463446 IRS4O14654 1257 aaPredicted RBP9.2□□□□□ -0.94
EPHA4-210ENST00000463446 GYS1P13807 737 aa9.2□□□□□ -0.94
EPHA4-210ENST00000463446 ALDH1B1P30837 517 aa9.2□□□□□ -0.94
EPHA4-210ENST00000463446 IFIT5Q13325 482 aaKnown RBP9.2□□□□□ -0.94
EPHA4-210ENST00000463446 MTX1Q13505 466 aa9.2□□□□□ -0.94
EPHA4-210ENST00000463446 GRIPAP1Q4V328 841 aa9.2□□□□□ -0.94
EPHA4-210ENST00000463446 CENPQQ7L2Z9 268 aaPredicted RBP9.2□□□□□ -0.94
EPHA4-210ENST00000463446 UBE3BQ7Z3V4 1068 aa9.2□□□□□ -0.94
EPHA4-210ENST00000463446 TMC4Q7Z404 712 aa9.2□□□□□ -0.94
EPHA4-210ENST00000463446 COL23A1Q86Y22 540 aaPredicted RBP9.2□□□□□ -0.94
EPHA4-210ENST00000463446 ANKRD44Q8N8A2 993 aa9.2□□□□□ -0.94
EPHA4-210ENST00000463446 GTF3C3Q9Y5Q9 886 aa9.2□□□□□ -0.94
EPHA4-210ENST00000463446 C4BP0C0L5 1744 aa9.19□□□□□ -0.94
EPHA4-210ENST00000463446 SERPINB2P05120 415 aa9.19□□□□□ -0.94
EPHA4-210ENST00000463446 NBPF7P0C2Y1 421 aaPredicted RBP9.19□□□□□ -0.94
EPHA4-210ENST00000463446 GPTP24298 496 aa9.19□□□□□ -0.94
EPHA4-210ENST00000463446 G3BP1Q13283 466 aaKnown RBP eCLIP9.19□□□□□ -0.94
EPHA4-210ENST00000463446 TAF7LQ5H9L4 462 aa9.19□□□□□ -0.94
EPHA4-210ENST00000463446 SUSD4Q5VX71 490 aa9.19□□□□□ -0.94
EPHA4-210ENST00000463446 CNBD1Q8NA66 436 aa9.19□□□□□ -0.94
EPHA4-210ENST00000463446 CDC5LQ99459 802 aaKnown RBP9.19□□□□□ -0.94
EPHA4-210ENST00000463446 BRIP1Q9BX63 1249 aa9.19□□□□□ -0.94
EPHA4-210ENST00000463446 MTFR1LQ9H019 292 aa9.19□□□□□ -0.94
EPHA4-210ENST00000463446 ANKRD18BA2A2Z9 1011 aa9.18□□□□□ -0.94
EPHA4-210ENST00000463446 SRGAP3O43295 1099 aa9.18□□□□□ -0.94
EPHA4-210ENST00000463446 EIF5BO60841 1220 aaKnown RBP9.18□□□□□ -0.94
EPHA4-210ENST00000463446 BBOX1O75936 387 aa9.18□□□□□ -0.94
EPHA4-210ENST00000463446 CSF1RP07333 972 aa9.18□□□□□ -0.94
EPHA4-210ENST00000463446 NFIXQ14938 502 aa9.18□□□□□ -0.94
EPHA4-210ENST00000463446 SF3B3Q15393 1217 aaKnown RBP9.18□□□□□ -0.94
EPHA4-210ENST00000463446 TBC1D9BQ66K14 1250 aa9.18□□□□□ -0.94
EPHA4-210ENST00000463446 BICDL1Q6ZP65 573 aa9.18□□□□□ -0.94
EPHA4-210ENST00000463446 FAM89AQ96GI7 184 aa9.18□□□□□ -0.94
EPHA4-210ENST00000463446 RBM17Q96I25 401 aaKnown RBP9.18□□□□□ -0.94
EPHA4-210ENST00000463446 MEIS3Q99687 375 aa9.18□□□□□ -0.94
EPHA4-210ENST00000463446 COL5A3P25940 1745 aaPredicted RBP9.17□□□□□ -0.94
EPHA4-210ENST00000463446 TJP1Q07157 1748 aa9.17□□□□□ -0.94
EPHA4-210ENST00000463446 PNPLA7Q6ZV29 1317 aa9.17□□□□□ -0.94
EPHA4-210ENST00000463446 IGHMBP2P38935 993 aaKnown RBP9.17□□□□□ -0.94
EPHA4-210ENST00000463446 IRX6P78412 446 aaPredicted RBP9.17□□□□□ -0.94
EPHA4-210ENST00000463446 ZNF827Q17R98 1081 aa9.17□□□□□ -0.94
EPHA4-210ENST00000463446 RABL6Q3YEC7 729 aaPredicted RBP9.17□□□□□ -0.94
EPHA4-210ENST00000463446 DDX46Q7L014 1031 aaKnown RBP9.17□□□□□ -0.94
EPHA4-210ENST00000463446 SSH3Q8TE77 659 aa9.17□□□□□ -0.94
EPHA4-210ENST00000463446 MPHOSPH8Q99549 860 aa9.17□□□□□ -0.94
EPHA4-210ENST00000463446 DCTPP1Q9H773 170 aa9.17□□□□□ -0.94
EPHA4-210ENST00000463446 AKAP2Q9Y2D5 859 aa9.17□□□□□ -0.94
EPHA4-210ENST00000463446 LRRFIP2Q9Y608 721 aaKnown RBP9.17□□□□□ -0.94
EPHA4-210ENST00000463446 RREB1Q92766 1687 aa9.16□□□□□ -0.94
EPHA4-210ENST00000463446 H0YIN7 160 aa9.16□□□□□ -0.94
EPHA4-210ENST00000463446 CTSWP56202 376 aa9.16□□□□□ -0.94
EPHA4-210ENST00000463446 TGFB2P61812 414 aa9.16□□□□□ -0.94
EPHA4-210ENST00000463446 OS9Q13438 667 aaPredicted RBP9.16□□□□□ -0.94
EPHA4-210ENST00000463446 CEP85Q6P2H3 762 aa9.16□□□□□ -0.94
EPHA4-210ENST00000463446 LMBR1LQ6UX01 489 aa9.16□□□□□ -0.94
EPHA4-210ENST00000463446 TTLL11Q8NHH1 800 aa9.16□□□□□ -0.94
EPHA4-210ENST00000463446 RPGRQ92834 1020 aaKnown RBP9.16□□□□□ -0.94
EPHA4-210ENST00000463446 BCL2L12Q9HB09 334 aa9.16□□□□□ -0.94
EPHA4-210ENST00000463446 SRP68Q9UHB9 627 aaKnown RBP9.16□□□□□ -0.94
EPHA4-210ENST00000463446 CHMP3Q9Y3E7 222 aa9.16□□□□□ -0.94
EPHA4-210ENST00000463446 TAF1LQ8IZX4 1826 aa9.16□□□□□ -0.94
EPHA4-210ENST00000463446 TNS1Q9HBL0 1735 aaKnown RBP9.15□□□□□ -0.94
EPHA4-210ENST00000463446 KLRG2A4D1S0 409 aaPredicted RBP9.15□□□□□ -0.94
EPHA4-210ENST00000463446 POLRMTO00411 1230 aaKnown RBP9.15□□□□□ -0.94
EPHA4-210ENST00000463446 SURF6O75683 361 aaKnown RBP9.15□□□□□ -0.94
EPHA4-210ENST00000463446 CIAO1O76071 339 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms