RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 PHAXQ9H814 394 aaKnown RBP23.22■■□□□ 1.31
LINC00960-201ENST00000463183 IBTKQ9P2D0 1353 aaPredicted RBP23.22■■□□□ 1.31
LINC00960-201ENST00000463183 ATP5J2-PTCD1G3V325 749 aa23.21■■□□□ 1.31
LINC00960-201ENST00000463183 C3orf67Q6ZVT6 689 aa23.21■■□□□ 1.31
LINC00960-201ENST00000463183 TAOK3Q9H2K8 898 aa23.21■■□□□ 1.31
LINC00960-201ENST00000463183 TRMT112Q9UI30 125 aaKnown RBP23.21■■□□□ 1.31
LINC00960-201ENST00000463183 GOLGA2Q08379 1002 aa23.2■■□□□ 1.3
LINC00960-201ENST00000463183 RIC3Q7Z5B4 369 aa23.2■■□□□ 1.3
LINC00960-201ENST00000463183 NMRK2Q9NPI5 230 aa23.2■■□□□ 1.3
LINC00960-201ENST00000463183 SBF1O95248 1867 aa23.2■■□□□ 1.3
LINC00960-201ENST00000463183 HCLS1P14317 486 aaPredicted RBP23.19■■□□□ 1.3
LINC00960-201ENST00000463183 ALDH1B1P30837 517 aa23.19■■□□□ 1.3
LINC00960-201ENST00000463183 CCDC93Q567U6 631 aa23.19■■□□□ 1.3
LINC00960-201ENST00000463183 SOGA3Q5TF21 947 aa23.19■■□□□ 1.3
LINC00960-201ENST00000463183 CCDC30Q5VVM6 783 aa23.19■■□□□ 1.3
LINC00960-201ENST00000463183 SYNE4Q8N205 404 aa23.19■■□□□ 1.3
LINC00960-201ENST00000463183 NLRP3Q96P20 1036 aa23.18■■□□□ 1.3
LINC00960-201ENST00000463183 ANKRD36CQ5JPF3 1778 aa23.18■■□□□ 1.3
LINC00960-201ENST00000463183 TWISTNBQ3B726 338 aaPredicted RBP23.17■■□□□ 1.3
LINC00960-201ENST00000463183 CRY2Q49AN0 593 aa23.17■■□□□ 1.3
LINC00960-201ENST00000463183 RTL5Q5HYW3 569 aaPredicted RBP23.17■■□□□ 1.3
LINC00960-201ENST00000463183 RBM17Q96I25 401 aaKnown RBP23.17■■□□□ 1.3
LINC00960-201ENST00000463183 IL16Q14005 1332 aa23.17■■□□□ 1.3
LINC00960-201ENST00000463183 KIF3CO14782 793 aa23.16■■□□□ 1.3
LINC00960-201ENST00000463183 C7orf43Q8WVR3 580 aa23.16■■□□□ 1.3
LINC00960-201ENST00000463183 KDM2BQ8NHM5 1336 aa23.16■■□□□ 1.3
LINC00960-201ENST00000463183 SH3TC1Q8TE82 1336 aa23.16■■□□□ 1.3
LINC00960-201ENST00000463183 FANCIQ9NVI1 1328 aa23.16■■□□□ 1.3
LINC00960-201ENST00000463183 ARFGEF2Q9Y6D5 1785 aa23.16■■□□□ 1.3
LINC00960-201ENST00000463183 STK31Q9BXU1 1019 aa23.15■■□□□ 1.3
LINC00960-201ENST00000463183 CCDC88AQ3V6T2 1871 aa23.15■■□□□ 1.3
LINC00960-201ENST00000463183 WDR63Q8IWG1 891 aa23.14■■□□□ 1.3
LINC00960-201ENST00000463183 MYD88Q99836 296 aa23.14■■□□□ 1.3
LINC00960-201ENST00000463183 FER1L6Q2WGJ9 1857 aa23.14■■□□□ 1.29
LINC00960-201ENST00000463183 RIC1Q4ADV7 1423 aa23.13■■□□□ 1.29
LINC00960-201ENST00000463183 SLC51AQ86UW1 340 aa23.13■■□□□ 1.29
LINC00960-201ENST00000463183 FAM89AQ96GI7 184 aa23.13■■□□□ 1.29
LINC00960-201ENST00000463183 ISCA1Q9BUE6 129 aa23.13■■□□□ 1.29
LINC00960-201ENST00000463183 CHMP4AQ9BY43 222 aa23.13■■□□□ 1.29
LINC00960-201ENST00000463183 RRAGCQ9HB90 399 aa23.13■■□□□ 1.29
LINC00960-201ENST00000463183 ZNF277Q9NRM2 450 aaPredicted RBP23.13■■□□□ 1.29
LINC00960-201ENST00000463183 PPEF1O14829 653 aaPredicted RBP23.12■■□□□ 1.29
LINC00960-201ENST00000463183 NCBP3Q53F19 620 aaKnown RBP23.12■■□□□ 1.29
LINC00960-201ENST00000463183 SLC10A5Q5PT55 438 aa23.12■■□□□ 1.29
LINC00960-201ENST00000463183 RNF123Q5XPI4 1314 aa23.12■■□□□ 1.29
LINC00960-201ENST00000463183 TIAM2Q8IVF5 1701 aa23.12■■□□□ 1.29
LINC00960-201ENST00000463183 DDX58O95786 925 aaKnown RBP23.11■■□□□ 1.29
LINC00960-201ENST00000463183 HOXA10P31260 410 aaPredicted RBP23.11■■□□□ 1.29
LINC00960-201ENST00000463183 FKBP4Q02790 459 aaKnown RBP eCLIP23.11■■□□□ 1.29
LINC00960-201ENST00000463183 EXOSC9Q06265 439 aaKnown RBP23.11■■□□□ 1.29
LINC00960-201ENST00000463183 C16orf71Q8IYS4 520 aaPredicted RBP23.11■■□□□ 1.29
LINC00960-201ENST00000463183 SPINK5Q9NQ38 1064 aaPredicted RBP23.11■■□□□ 1.29
LINC00960-201ENST00000463183 LTBP3Q9NS15 1303 aa23.11■■□□□ 1.29
LINC00960-201ENST00000463183 RTKN2Q8IZC4 609 aa23.1■■□□□ 1.29
LINC00960-201ENST00000463183 CRAMP1Q96RY5 1269 aa23.1■■□□□ 1.29
LINC00960-201ENST00000463183 ZC3H4Q9UPT8 1303 aaKnown RBP23.1■■□□□ 1.29
LINC00960-201ENST00000463183 SLC4A2P04920 1241 aa23.09■■□□□ 1.29
LINC00960-201ENST00000463183 MAP3K2Q9Y2U5 619 aa23.09■■□□□ 1.29
LINC00960-201ENST00000463183 ABCC4O15439 1325 aa23.09■■□□□ 1.29
LINC00960-201ENST00000463183 GLTPD2A6NH11 291 aa23.08■■□□□ 1.29
LINC00960-201ENST00000463183 DDX46Q7L014 1031 aaKnown RBP23.08■■□□□ 1.29
LINC00960-201ENST00000463183 G2E3Q7L622 706 aa23.08■■□□□ 1.29
LINC00960-201ENST00000463183 JARID2Q92833 1246 aaPredicted RBP23.08■■□□□ 1.29
LINC00960-201ENST00000463183 TMX4Q9H1E5 349 aaPredicted RBP23.08■■□□□ 1.29
LINC00960-201ENST00000463183 DPY19L2Q6NUT2 758 aa23.08■■□□□ 1.28
LINC00960-201ENST00000463183 PI4KAP2A4QPH2 592 aa23.07■■□□□ 1.28
LINC00960-201ENST00000463183 IRS4O14654 1257 aaPredicted RBP23.07■■□□□ 1.28
LINC00960-201ENST00000463183 PI4KAP1Q8N8J0 262 aa23.07■■□□□ 1.28
LINC00960-201ENST00000463183 MYH16Q9H6N6 1097 aa23.07■■□□□ 1.28
LINC00960-201ENST00000463183 METTL22Q9BUU2 404 aaPredicted RBP23.06■■□□□ 1.28
LINC00960-201ENST00000463183 TOMM70O94826 608 aa23.05■■□□□ 1.28
LINC00960-201ENST00000463183 IARSP41252 1262 aaKnown RBP23.05■■□□□ 1.28
LINC00960-201ENST00000463183 TRIM28Q13263 835 aaKnown RBP23.05■■□□□ 1.28
LINC00960-201ENST00000463183 CC2D2BQ6DHV5 1058 aa23.05■■□□□ 1.28
LINC00960-201ENST00000463183 KSR2Q6VAB6 950 aa23.05■■□□□ 1.28
LINC00960-201ENST00000463183 CWC25Q9NXE8 425 aaPredicted RBP23.05■■□□□ 1.28
LINC00960-201ENST00000463183 LAMB2P55268 1798 aa23.04■■□□□ 1.28
LINC00960-201ENST00000463183 VAMP4O75379 141 aa23.04■■□□□ 1.28
LINC00960-201ENST00000463183 DDNO94850 711 aaPredicted RBP23.04■■□□□ 1.28
LINC00960-201ENST00000463183 DICER1Q9UPY3 1922 aaKnown RBP23.03■■□□□ 1.28
LINC00960-201ENST00000463183 NEXNQ0ZGT2 675 aa23.03■■□□□ 1.28
LINC00960-201ENST00000463183 FLIIQ13045 1269 aa23.03■■□□□ 1.28
LINC00960-201ENST00000463183 FKBP5Q13451 457 aaPredicted RBP23.03■■□□□ 1.28
LINC00960-201ENST00000463183 GRAPQ13588 217 aa23.03■■□□□ 1.28
LINC00960-201ENST00000463183 ZBTB38Q8NAP3 1195 aaPredicted RBP23.03■■□□□ 1.28
LINC00960-201ENST00000463183 CCDC191Q8NCU4 936 aa23.03■■□□□ 1.28
LINC00960-201ENST00000463183 GRAPLQ8TC17 118 aaPredicted RBP23.03■■□□□ 1.28
LINC00960-201ENST00000463183 CCDC85AQ96PX6 553 aaPredicted RBP23.03■■□□□ 1.28
LINC00960-201ENST00000463183 ATP6V0A2Q9Y487 856 aa23.03■■□□□ 1.28
LINC00960-201ENST00000463183 PSMD1Q99460 953 aa23.02■■□□□ 1.28
LINC00960-201ENST00000463183 DDX60Q8IY21 1712 aaKnown RBP23.01■■□□□ 1.27
LINC00960-201ENST00000463183 VEGFAP15692 232 aaPredicted RBP23.01■■□□□ 1.27
LINC00960-201ENST00000463183 LARGE2Q8N3Y3 721 aa23.01■■□□□ 1.27
LINC00960-201ENST00000463183 JDP2Q8WYK2 163 aa23.01■■□□□ 1.27
LINC00960-201ENST00000463183 ZNF541Q9H0D2 1346 aa23■■□□□ 1.27
LINC00960-201ENST00000463183 BBOX1O75936 387 aa23■■□□□ 1.27
LINC00960-201ENST00000463183 CWF19L2Q2TBE0 894 aaKnown RBP23■■□□□ 1.27
LINC00960-201ENST00000463183 TAF1P21675 1872 aa22.99■■□□□ 1.27
LINC00960-201ENST00000463183 PCCAP05165 728 aaPredicted RBP22.99■■□□□ 1.27
LINC00960-201ENST00000463183 IGKV5-2P06315 115 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms