RNA–Protein interactions for RNA: ENST00000462806.5

TUBA4A-208, Transcript of tubulin alpha 4a, humanhuman

TSL 2

Gene TUBA4A, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-208ENST00000462806 SYNE4Q8N205 404 aa17.05■□□□□ 0.32
TUBA4A-208ENST00000462806 JARID2Q92833 1246 aaPredicted RBP17.05■□□□□ 0.32
TUBA4A-208ENST00000462806 RPGRQ92834 1020 aaKnown RBP17.05■□□□□ 0.32
TUBA4A-208ENST00000462806 ISCA1Q9BUE6 129 aa17.05■□□□□ 0.32
TUBA4A-208ENST00000462806 NTSR2O95665 410 aa17.04■□□□□ 0.32
TUBA4A-208ENST00000462806 DNAAF4Q8WXU2 420 aa17.04■□□□□ 0.32
TUBA4A-208ENST00000462806 SSH1Q8WYL5 1049 aa17.04■□□□□ 0.32
TUBA4A-208ENST00000462806 MASTLQ96GX5 879 aa17.04■□□□□ 0.32
TUBA4A-208ENST00000462806 SMC4Q9NTJ3 1288 aa17.04■□□□□ 0.32
TUBA4A-208ENST00000462806 CWC25Q9NXE8 425 aaPredicted RBP17.04■□□□□ 0.32
TUBA4A-208ENST00000462806 C10orf71Q711Q0 1435 aa17.04■□□□□ 0.32
TUBA4A-208ENST00000462806 SH3TC1Q8TE82 1336 aa17.03■□□□□ 0.32
TUBA4A-208ENST00000462806 F6X3S4 739 aa17.03■□□□□ 0.32
TUBA4A-208ENST00000462806 NPR1P16066 1061 aa17.03■□□□□ 0.32
TUBA4A-208ENST00000462806 TRIM28Q13263 835 aaKnown RBP17.03■□□□□ 0.32
TUBA4A-208ENST00000462806 MRPL50Q8N5N7 158 aaKnown RBP17.03■□□□□ 0.32
TUBA4A-208ENST00000462806 CCDC191Q8NCU4 936 aa17.03■□□□□ 0.32
TUBA4A-208ENST00000462806 CNKSR1Q969H4 720 aa17.03■□□□□ 0.32
TUBA4A-208ENST00000462806 COL24A1Q17RW2 1714 aa17.02■□□□□ 0.32
TUBA4A-208ENST00000462806 CT47B1P0C2W7 299 aaPredicted RBP17.02■□□□□ 0.32
TUBA4A-208ENST00000462806 SRGNP10124 158 aa17.02■□□□□ 0.32
TUBA4A-208ENST00000462806 ALDH1B1P30837 517 aa17.02■□□□□ 0.32
TUBA4A-208ENST00000462806 C1QTNF8P60827 252 aa17.02■□□□□ 0.32
TUBA4A-208ENST00000462806 SLC10A5Q5PT55 438 aa17.02■□□□□ 0.32
TUBA4A-208ENST00000462806 STYK1Q6J9G0 422 aa17.02■□□□□ 0.32
TUBA4A-208ENST00000462806 RBM17Q96I25 401 aaKnown RBP17.02■□□□□ 0.32
TUBA4A-208ENST00000462806 YTHDC1Q96MU7 727 aaKnown RBP17.02■□□□□ 0.32
TUBA4A-208ENST00000462806 ATP10DQ9P241 1426 aa17.02■□□□□ 0.31
TUBA4A-208ENST00000462806 CWF19L2Q2TBE0 894 aaKnown RBP17.01■□□□□ 0.31
TUBA4A-208ENST00000462806 ALDH1L2Q3SY69 923 aa17.01■□□□□ 0.31
TUBA4A-208ENST00000462806 TMX4Q9H1E5 349 aaPredicted RBP17.01■□□□□ 0.31
TUBA4A-208ENST00000462806 IRS4O14654 1257 aaPredicted RBP17■□□□□ 0.31
TUBA4A-208ENST00000462806 C21orf2O43822 256 aa17■□□□□ 0.31
TUBA4A-208ENST00000462806 C4AP0C0L4 1744 aa17■□□□□ 0.31
TUBA4A-208ENST00000462806 HSP90B1P14625 803 aaKnown RBP17■□□□□ 0.31
TUBA4A-208ENST00000462806 ZBTB38Q8NAP3 1195 aaPredicted RBP17■□□□□ 0.31
TUBA4A-208ENST00000462806 PXDNLA1KZ92 1463 aa16.99■□□□□ 0.31
TUBA4A-208ENST00000462806 ZBED9Q6R2W3 1325 aa16.99■□□□□ 0.31
TUBA4A-208ENST00000462806 NOB1Q9ULX3 412 aaKnown RBP16.99■□□□□ 0.31
TUBA4A-208ENST00000462806 KLRG2A4D1S0 409 aaPredicted RBP16.98■□□□□ 0.31
TUBA4A-208ENST00000462806 NEURL1BA8MQ27 555 aa16.98■□□□□ 0.31
TUBA4A-208ENST00000462806 IGKV5-2P06315 115 aa16.98■□□□□ 0.31
TUBA4A-208ENST00000462806 DDX46Q7L014 1031 aaKnown RBP16.98■□□□□ 0.31
TUBA4A-208ENST00000462806 LINS1Q8NG48 757 aa16.98■□□□□ 0.31
TUBA4A-208ENST00000462806 RNF123Q5XPI4 1314 aa16.97■□□□□ 0.31
TUBA4A-208ENST00000462806 PCCAP05165 728 aaPredicted RBP16.97■□□□□ 0.31
TUBA4A-208ENST00000462806 RARSP54136 660 aaKnown RBP16.97■□□□□ 0.31
TUBA4A-208ENST00000462806 PRPF40BQ6NWY9 871 aaKnown RBP16.97■□□□□ 0.31
TUBA4A-208ENST00000462806 C3orf67Q6ZVT6 689 aa16.97■□□□□ 0.31
TUBA4A-208ENST00000462806 FRAT1Q92837 279 aaPredicted RBP16.97■□□□□ 0.31
TUBA4A-208ENST00000462806 C9orf78Q9NZ63 289 aaPredicted RBP16.97■□□□□ 0.31
TUBA4A-208ENST00000462806 ADCY9O60503 1353 aa16.97■□□□□ 0.31
TUBA4A-208ENST00000462806 LAMB4A4D0S4 1761 aa16.97■□□□□ 0.31
TUBA4A-208ENST00000462806 CCDC85AQ96PX6 553 aaPredicted RBP16.96■□□□□ 0.31
TUBA4A-208ENST00000462806 SRCIN1Q9C0H9 1055 aa16.96■□□□□ 0.31
TUBA4A-208ENST00000462806 ABCC12Q96J65 1359 aa16.95■□□□□ 0.3
TUBA4A-208ENST00000462806 IPO8O15397 1037 aaKnown RBP16.95■□□□□ 0.3
TUBA4A-208ENST00000462806 PDE8AO60658 829 aa16.95■□□□□ 0.3
TUBA4A-208ENST00000462806 GCKRQ14397 625 aa16.95■□□□□ 0.3
TUBA4A-208ENST00000462806 BEND3Q5T5X7 828 aa16.95■□□□□ 0.3
TUBA4A-208ENST00000462806 UBE3BQ7Z3V4 1068 aa16.95■□□□□ 0.3
TUBA4A-208ENST00000462806 CEP350Q5VT06 3117 aa16.95■□□□□ 0.3
TUBA4A-208ENST00000462806 PTPRCP08575 1304 aa16.95■□□□□ 0.3
TUBA4A-208ENST00000462806 IBTKQ9P2D0 1353 aaPredicted RBP16.94■□□□□ 0.3
TUBA4A-208ENST00000462806 CRY2Q49AN0 593 aa16.94■□□□□ 0.3
TUBA4A-208ENST00000462806 CRAMP1Q96RY5 1269 aa16.94■□□□□ 0.3
TUBA4A-208ENST00000462806 H7C1W4 665 aa16.93■□□□□ 0.3
TUBA4A-208ENST00000462806 BCAR3O75815 825 aa16.93■□□□□ 0.3
TUBA4A-208ENST00000462806 BBOX1O75936 387 aa16.93■□□□□ 0.3
TUBA4A-208ENST00000462806 HOXA10P31260 410 aaPredicted RBP16.93■□□□□ 0.3
TUBA4A-208ENST00000462806 SOGA3Q5TF21 947 aa16.93■□□□□ 0.3
TUBA4A-208ENST00000462806 CCDC152Q4G0S7 254 aa16.92■□□□□ 0.3
TUBA4A-208ENST00000462806 API5Q9BZZ5 524 aaKnown RBP16.92■□□□□ 0.3
TUBA4A-208ENST00000462806 PPEF1O14829 653 aaPredicted RBP16.91■□□□□ 0.3
TUBA4A-208ENST00000462806 ALDH1L1O75891 902 aa16.91■□□□□ 0.3
TUBA4A-208ENST00000462806 SF3B3Q15393 1217 aaKnown RBP16.91■□□□□ 0.3
TUBA4A-208ENST00000462806 CCDC93Q567U6 631 aa16.91■□□□□ 0.3
TUBA4A-208ENST00000462806 OLFM4Q6UX06 510 aa16.91■□□□□ 0.3
TUBA4A-208ENST00000462806 CHMP3Q9Y3E7 222 aa16.91■□□□□ 0.3
TUBA4A-208ENST00000462806 SCN7AQ01118 1682 aa16.91■□□□□ 0.3
TUBA4A-208ENST00000462806 RASSF7Q02833 373 aa16.9■□□□□ 0.3
TUBA4A-208ENST00000462806 C9orf131Q5VYM1 1079 aa16.9■□□□□ 0.3
TUBA4A-208ENST00000462806 RTKN2Q8IZC4 609 aa16.9■□□□□ 0.3
TUBA4A-208ENST00000462806 RNF181Q9P0P0 153 aa16.9■□□□□ 0.3
TUBA4A-208ENST00000462806 GRM8O00222 908 aa16.89■□□□□ 0.29
TUBA4A-208ENST00000462806 RPS8P62241 208 aaKnown RBP16.89■□□□□ 0.29
TUBA4A-208ENST00000462806 GRAPQ13588 217 aa16.89■□□□□ 0.29
TUBA4A-208ENST00000462806 GRAPLQ8TC17 118 aaPredicted RBP16.89■□□□□ 0.29
TUBA4A-208ENST00000462806 SEC31BQ9NQW1 1179 aa16.89■□□□□ 0.29
TUBA4A-208ENST00000462806 CCT4P50991 539 aaKnown RBP16.88■□□□□ 0.29
TUBA4A-208ENST00000462806 CTSWP56202 376 aa16.88■□□□□ 0.29
TUBA4A-208ENST00000462806 CC2D2BQ6DHV5 1058 aa16.88■□□□□ 0.29
TUBA4A-208ENST00000462806 C7orf43Q8WVR3 580 aa16.88■□□□□ 0.29
TUBA4A-208ENST00000462806 CLUAP1Q96AJ1 413 aa16.88■□□□□ 0.29
TUBA4A-208ENST00000462806 ABCC4O15439 1325 aa16.88■□□□□ 0.29
TUBA4A-208ENST00000462806 KIF16BQ96L93 1317 aa16.88■□□□□ 0.29
TUBA4A-208ENST00000462806 CDHR2Q9BYE9 1310 aa16.88■□□□□ 0.29
TUBA4A-208ENST00000462806 LMNB1P20700 586 aa16.87■□□□□ 0.29
TUBA4A-208ENST00000462806 BRPF1P55201 1214 aaPredicted RBP16.87■□□□□ 0.29
TUBA4A-208ENST00000462806 SP8Q8IXZ3 490 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms