RNA–Protein interactions for RNA: ENST00000462268.1

SYN3-207, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-207ENST00000462268 DUSP27Q5VZP5 1158 aa11.44□□□□□ -0.58
SYN3-207ENST00000462268 NECTIN2Q92692 538 aa11.44□□□□□ -0.58
SYN3-207ENST00000462268 CHMP4AQ9BY43 222 aa11.44□□□□□ -0.58
SYN3-207ENST00000462268 DBF4Q9UBU7 674 aaPredicted RBP11.44□□□□□ -0.58
SYN3-207ENST00000462268 UBN2Q6ZU65 1347 aa11.43□□□□□ -0.58
SYN3-207ENST00000462268 BRCA1P38398 1863 aaKnown RBP11.43□□□□□ -0.58
SYN3-207ENST00000462268 ANXA1P04083 346 aa11.43□□□□□ -0.58
SYN3-207ENST00000462268 LMNB1P20700 586 aa11.43□□□□□ -0.58
SYN3-207ENST00000462268 GPTP24298 496 aa11.43□□□□□ -0.58
SYN3-207ENST00000462268 RASSF7Q02833 373 aa11.43□□□□□ -0.58
SYN3-207ENST00000462268 PRPF40BQ6NWY9 871 aaKnown RBP11.43□□□□□ -0.58
SYN3-207ENST00000462268 COPS6Q7L5N1 327 aa11.43□□□□□ -0.58
SYN3-207ENST00000462268 PPP1R42Q7Z4L9 355 aa11.43□□□□□ -0.58
SYN3-207ENST00000462268 ZNF34Q8IZ26 560 aa11.43□□□□□ -0.58
SYN3-207ENST00000462268 XAGE3Q8WTP9 111 aa11.43□□□□□ -0.58
SYN3-207ENST00000462268 CHPF2Q9P2E5 772 aa11.43□□□□□ -0.58
SYN3-207ENST00000462268 AFDNP55196 1824 aaKnown RBP11.43□□□□□ -0.58
SYN3-207ENST00000462268 RIC1Q4ADV7 1423 aa11.43□□□□□ -0.58
SYN3-207ENST00000462268 ABCC12Q96J65 1359 aa11.42□□□□□ -0.58
SYN3-207ENST00000462268 RNF123Q5XPI4 1314 aa11.42□□□□□ -0.58
SYN3-207ENST00000462268 C21orf2O43822 256 aa11.42□□□□□ -0.58
SYN3-207ENST00000462268 AIMP1Q12904 312 aaKnown RBP11.42□□□□□ -0.58
SYN3-207ENST00000462268 HYPKQ9NX55 129 aa11.42□□□□□ -0.58
SYN3-207ENST00000462268 KDM2BQ8NHM5 1336 aa11.41□□□□□ -0.58
SYN3-207ENST00000462268 LTBP3Q9NS15 1303 aa11.41□□□□□ -0.58
SYN3-207ENST00000462268 NFKBIEO00221 500 aa11.41□□□□□ -0.58
SYN3-207ENST00000462268 NTSR2O95665 410 aa11.41□□□□□ -0.58
SYN3-207ENST00000462268 ALDH1B1P30837 517 aa11.41□□□□□ -0.58
SYN3-207ENST00000462268 CRY2Q49AN0 593 aa11.41□□□□□ -0.58
SYN3-207ENST00000462268 ERFEQ4G0M1 354 aa11.41□□□□□ -0.58
SYN3-207ENST00000462268 SUSD4Q5VX71 490 aa11.41□□□□□ -0.58
SYN3-207ENST00000462268 NUTM1Q86Y26 1132 aa11.41□□□□□ -0.58
SYN3-207ENST00000462268 UTP14AQ9BVJ6 771 aaKnown RBP11.41□□□□□ -0.58
SYN3-207ENST00000462268 TAOK3Q9H2K8 898 aa11.41□□□□□ -0.58
SYN3-207ENST00000462268 ARFGEF1Q9Y6D6 1849 aa11.41□□□□□ -0.58
SYN3-207ENST00000462268 DLEC1Q9Y238 1755 aa11.41□□□□□ -0.58
SYN3-207ENST00000462268 IL16Q14005 1332 aa11.4□□□□□ -0.58
SYN3-207ENST00000462268 CCDC93Q567U6 631 aa11.4□□□□□ -0.58
SYN3-207ENST00000462268 WWC1Q8IX03 1113 aa11.4□□□□□ -0.58
SYN3-207ENST00000462268 PLBD2Q8NHP8 589 aa11.4□□□□□ -0.58
SYN3-207ENST00000462268 RPGRQ92834 1020 aaKnown RBP11.4□□□□□ -0.58
SYN3-207ENST00000462268 COL11A2P13942 1736 aaPredicted RBP11.39□□□□□ -0.59
SYN3-207ENST00000462268 GOLGA2Q08379 1002 aa11.39□□□□□ -0.59
SYN3-207ENST00000462268 TCIRG1Q13488 830 aa11.39□□□□□ -0.59
SYN3-207ENST00000462268 ANKRD31Q8N7Z5 1873 aa11.39□□□□□ -0.59
SYN3-207ENST00000462268 KIF3CO14782 793 aa11.38□□□□□ -0.59
SYN3-207ENST00000462268 CCDC30Q5VVM6 783 aa11.38□□□□□ -0.59
SYN3-207ENST00000462268 ANKRD13DQ6ZTN6 518 aa11.38□□□□□ -0.59
SYN3-207ENST00000462268 NLRP10Q86W26 655 aa11.38□□□□□ -0.59
SYN3-207ENST00000462268 RTKN2Q8IZC4 609 aa11.38□□□□□ -0.59
SYN3-207ENST00000462268 RBM17Q96I25 401 aaKnown RBP11.38□□□□□ -0.59
SYN3-207ENST00000462268 NLRP3Q96P20 1036 aa11.38□□□□□ -0.59
SYN3-207ENST00000462268 SH3TC1Q8TE82 1336 aa11.37□□□□□ -0.59
SYN3-207ENST00000462268 SENP3-EIF4A1A0A087X0R7 540 aa11.37□□□□□ -0.59
SYN3-207ENST00000462268 ELL2O00472 640 aaPredicted RBP11.37□□□□□ -0.59
SYN3-207ENST00000462268 HOXA10P31260 410 aaPredicted RBP11.37□□□□□ -0.59
SYN3-207ENST00000462268 SLC10A5Q5PT55 438 aa11.37□□□□□ -0.59
SYN3-207ENST00000462268 CC2D2BQ6DHV5 1058 aa11.37□□□□□ -0.59
SYN3-207ENST00000462268 C8orf58Q8NAV2 365 aa11.37□□□□□ -0.59
SYN3-207ENST00000462268 C7orf43Q8WVR3 580 aa11.37□□□□□ -0.59
SYN3-207ENST00000462268 TSR2Q969E8 191 aaKnown RBP11.37□□□□□ -0.59
SYN3-207ENST00000462268 NMRK2Q9NPI5 230 aa11.37□□□□□ -0.59
SYN3-207ENST00000462268 TRMT112Q9UI30 125 aaKnown RBP11.37□□□□□ -0.59
SYN3-207ENST00000462268 DDX58O95786 925 aaKnown RBP11.36□□□□□ -0.59
SYN3-207ENST00000462268 PRELPP51888 382 aa11.36□□□□□ -0.59
SYN3-207ENST00000462268 FKBP4Q02790 459 aaKnown RBP eCLIP11.36□□□□□ -0.59
SYN3-207ENST00000462268 GRIPAP1Q4V328 841 aa11.36□□□□□ -0.59
SYN3-207ENST00000462268 DPY19L2Q6NUT2 758 aa11.36□□□□□ -0.59
SYN3-207ENST00000462268 RIC3Q7Z5B4 369 aa11.36□□□□□ -0.59
SYN3-207ENST00000462268 WDR63Q8IWG1 891 aa11.36□□□□□ -0.59
SYN3-207ENST00000462268 C16orf71Q8IYS4 520 aaPredicted RBP11.36□□□□□ -0.59
SYN3-207ENST00000462268 FAM9BQ8IZU0 186 aa11.36□□□□□ -0.59
SYN3-207ENST00000462268 CRAMP1Q96RY5 1269 aa11.36□□□□□ -0.59
SYN3-207ENST00000462268 STK31Q9BXU1 1019 aa11.36□□□□□ -0.59
SYN3-207ENST00000462268 TMX4Q9H1E5 349 aaPredicted RBP11.36□□□□□ -0.59
SYN3-207ENST00000462268 GLTPD2A6NH11 291 aa11.35□□□□□ -0.59
SYN3-207ENST00000462268 PPEF1O14829 653 aaPredicted RBP11.35□□□□□ -0.59
SYN3-207ENST00000462268 TOMM70O94826 608 aa11.35□□□□□ -0.59
SYN3-207ENST00000462268 POTEIP0CG38 1075 aa11.35□□□□□ -0.59
SYN3-207ENST00000462268 ISCA1Q9BUE6 129 aa11.35□□□□□ -0.59
SYN3-207ENST00000462268 FANCIQ9NVI1 1328 aa11.35□□□□□ -0.59
SYN3-207ENST00000462268 TNRC6CQ9HCJ0 1690 aaKnown RBP11.34□□□□□ -0.59
SYN3-207ENST00000462268 HSP90B1P14625 803 aaKnown RBP11.34□□□□□ -0.59
SYN3-207ENST00000462268 CD44P16070 742 aaKnown RBP11.34□□□□□ -0.59
SYN3-207ENST00000462268 TRIM28Q13263 835 aaKnown RBP11.34□□□□□ -0.59
SYN3-207ENST00000462268 TWISTNBQ3B726 338 aaPredicted RBP11.34□□□□□ -0.59
SYN3-207ENST00000462268 TSPYL6Q8N831 410 aa11.34□□□□□ -0.59
SYN3-207ENST00000462268 PSMD1Q99460 953 aa11.34□□□□□ -0.59
SYN3-207ENST00000462268 PHAXQ9H814 394 aaKnown RBP11.34□□□□□ -0.59
SYN3-207ENST00000462268 ATP5J2-PTCD1G3V325 749 aa11.33□□□□□ -0.6
SYN3-207ENST00000462268 HCLS1P14317 486 aaPredicted RBP11.33□□□□□ -0.6
SYN3-207ENST00000462268 C3orf67Q6ZVT6 689 aa11.33□□□□□ -0.6
SYN3-207ENST00000462268 DDX46Q7L014 1031 aaKnown RBP11.33□□□□□ -0.6
SYN3-207ENST00000462268 RBM46Q8TBY0 533 aaKnown RBP11.33□□□□□ -0.6
SYN3-207ENST00000462268 MYH16Q9H6N6 1097 aa11.33□□□□□ -0.6
SYN3-207ENST00000462268 SALL2Q9Y467 1007 aaPredicted RBP11.33□□□□□ -0.6
SYN3-207ENST00000462268 FARP1Q9Y4F1 1045 aaPredicted RBP11.33□□□□□ -0.6
SYN3-207ENST00000462268 ABCC4O15439 1325 aa11.33□□□□□ -0.6
SYN3-207ENST00000462268 ARFGEF2Q9Y6D5 1785 aa11.32□□□□□ -0.6
SYN3-207ENST00000462268 VEGFAP15692 232 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms