RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 CASP8AP2Q9UKL3 1982 aa20.58■□□□□ 0.89
APP-211ENST00000462267 BTBD11A6QL63 1104 aa20.58■□□□□ 0.89
APP-211ENST00000462267 KCNQ3O43525 872 aa20.58■□□□□ 0.89
APP-211ENST00000462267 CELF2O95319 508 aaKnown RBP20.58■□□□□ 0.89
APP-211ENST00000462267 EIF4G2P78344 907 aaKnown RBP eCLIP20.58■□□□□ 0.89
APP-211ENST00000462267 SIPA1L3O60292 1781 aaPredicted RBP20.58■□□□□ 0.89
APP-211ENST00000462267 CEMIPQ8WUJ3 1361 aa20.58■□□□□ 0.88
APP-211ENST00000462267 COL4A5P29400 1685 aa20.58■□□□□ 0.88
APP-211ENST00000462267 FAM177BA6PVY3 158 aa20.57■□□□□ 0.88
APP-211ENST00000462267 ADARB2Q9NS39 739 aaKnown RBP20.57■□□□□ 0.88
APP-211ENST00000462267 SNRPA1P09661 255 aaKnown RBP20.56■□□□□ 0.88
APP-211ENST00000462267 CIAPIN1Q6FI81 312 aa20.55■□□□□ 0.88
APP-211ENST00000462267 NIM1KQ8IY84 436 aa20.55■□□□□ 0.88
APP-211ENST00000462267 GPRC5DQ9NZD1 345 aa20.55■□□□□ 0.88
APP-211ENST00000462267 HOXA10P31260 410 aaPredicted RBP20.54■□□□□ 0.88
APP-211ENST00000462267 NYXQ9GZU5 481 aa20.54■□□□□ 0.88
APP-211ENST00000462267 PRAMEF22A3QJZ6 481 aa20.53■□□□□ 0.88
APP-211ENST00000462267 HSPA5P11021 654 aaKnown RBP20.53■□□□□ 0.88
APP-211ENST00000462267 NOGQ13253 232 aa20.53■□□□□ 0.88
APP-211ENST00000462267 RPGRQ92834 1020 aaKnown RBP20.53■□□□□ 0.88
APP-211ENST00000462267 PGAP2Q9UHJ9 254 aa20.53■□□□□ 0.88
APP-211ENST00000462267 NBPF26B4DH59 902 aa20.52■□□□□ 0.88
APP-211ENST00000462267 NBPF10Q6P3W6 841 aaKnown RBP20.52■□□□□ 0.88
APP-211ENST00000462267 NBPF15Q8N660 670 aa20.52■□□□□ 0.88
APP-211ENST00000462267 GLIS2Q9BZE0 524 aaPredicted RBP20.52■□□□□ 0.88
APP-211ENST00000462267 VPS33BQ9H267 617 aa20.52■□□□□ 0.88
APP-211ENST00000462267 HLFQ16534 295 aa20.51■□□□□ 0.87
APP-211ENST00000462267 ZC3H15Q8WU90 426 aaKnown RBP20.51■□□□□ 0.87
APP-211ENST00000462267 KIF7Q2M1P5 1343 aa20.51■□□□□ 0.87
APP-211ENST00000462267 ABCC12Q96J65 1359 aa20.5■□□□□ 0.87
APP-211ENST00000462267 U2SURPO15042 1029 aaKnown RBP20.5■□□□□ 0.87
APP-211ENST00000462267 PPIP5K2O43314 1243 aa20.5■□□□□ 0.87
APP-211ENST00000462267 PRPF38BQ5VTL8 546 aaKnown RBP20.5■□□□□ 0.87
APP-211ENST00000462267 CRAMP1Q96RY5 1269 aa20.5■□□□□ 0.87
APP-211ENST00000462267 NUTM1Q86Y26 1132 aa20.49■□□□□ 0.87
APP-211ENST00000462267 RBM17Q96I25 401 aaKnown RBP20.49■□□□□ 0.87
APP-211ENST00000462267 NPC1L1Q9UHC9 1359 aa20.48■□□□□ 0.87
APP-211ENST00000462267 RIC1Q4ADV7 1423 aa20.48■□□□□ 0.87
APP-211ENST00000462267 PPEF1O14829 653 aaPredicted RBP20.48■□□□□ 0.87
APP-211ENST00000462267 CXCL9Q07325 125 aa20.48■□□□□ 0.87
APP-211ENST00000462267 CDC37L1Q7L3B6 337 aa20.48■□□□□ 0.87
APP-211ENST00000462267 ZNF408Q9H9D4 720 aa20.48■□□□□ 0.87
APP-211ENST00000462267 ZNRF3Q9ULT6 936 aa20.48■□□□□ 0.87
APP-211ENST00000462267 CDHR2Q9BYE9 1310 aa20.48■□□□□ 0.87
APP-211ENST00000462267 GMPSP49915 693 aaPredicted RBP20.47■□□□□ 0.87
APP-211ENST00000462267 SOX10P56693 466 aa20.47■□□□□ 0.87
APP-211ENST00000462267 ZIC5Q96T25 663 aa20.47■□□□□ 0.87
APP-211ENST00000462267 TMX4Q9H1E5 349 aaPredicted RBP20.47■□□□□ 0.87
APP-211ENST00000462267 SAGE1Q9NXZ1 904 aa20.47■□□□□ 0.87
APP-211ENST00000462267 ERVV-1B6SEH8 477 aa20.46■□□□□ 0.87
APP-211ENST00000462267 AOC3Q16853 763 aa20.46■□□□□ 0.87
APP-211ENST00000462267 HUNKP57058 714 aa20.45■□□□□ 0.86
APP-211ENST00000462267 SUPT20HQ8NEM7 779 aa20.45■□□□□ 0.86
APP-211ENST00000462267 IBTKQ9P2D0 1353 aaPredicted RBP20.45■□□□□ 0.86
APP-211ENST00000462267 COL3A1P02461 1466 aaPredicted RBP20.44■□□□□ 0.86
APP-211ENST00000462267 TCERG1O14776 1098 aaKnown RBP20.44■□□□□ 0.86
APP-211ENST00000462267 PHACTR3Q96KR7 559 aa20.44■□□□□ 0.86
APP-211ENST00000462267 HIRAP54198 1017 aaPredicted RBP20.43■□□□□ 0.86
APP-211ENST00000462267 RTF1Q92541 710 aaKnown RBP20.43■□□□□ 0.86
APP-211ENST00000462267 BCL2L13Q9BXK5 485 aa20.43■□□□□ 0.86
APP-211ENST00000462267 ATP6V0A2Q9Y487 856 aa20.43■□□□□ 0.86
APP-211ENST00000462267 TNIP1Q15025 636 aa20.42■□□□□ 0.86
APP-211ENST00000462267 CC2D1BQ5T0F9 858 aaKnown RBP20.42■□□□□ 0.86
APP-211ENST00000462267 SLC51AQ86UW1 340 aa20.42■□□□□ 0.86
APP-211ENST00000462267 RTFDC1Q9BY42 306 aaPredicted RBP20.42■□□□□ 0.86
APP-211ENST00000462267 PRKAR2BP31323 418 aa20.41■□□□□ 0.86
APP-211ENST00000462267 RGMBQ6NW40 437 aa20.41■□□□□ 0.86
APP-211ENST00000462267 CCDC102AQ96A19 550 aa20.41■□□□□ 0.86
APP-211ENST00000462267 MAP3K15Q6ZN16 1313 aa20.41■□□□□ 0.86
APP-211ENST00000462267 FAM155AB1AL88 458 aaPredicted RBP20.4■□□□□ 0.86
APP-211ENST00000462267 PER1O15534 1290 aaPredicted RBP20.4■□□□□ 0.86
APP-211ENST00000462267 USP48Q86UV5 1035 aa20.4■□□□□ 0.86
APP-211ENST00000462267 TRPM4Q8TD43 1214 aa20.4■□□□□ 0.86
APP-211ENST00000462267 UBN2Q6ZU65 1347 aa20.39■□□□□ 0.85
APP-211ENST00000462267 H7C1D1 291 aa20.39■□□□□ 0.85
APP-211ENST00000462267 GPTP24298 496 aa20.39■□□□□ 0.85
APP-211ENST00000462267 SUSD4Q5VX71 490 aa20.39■□□□□ 0.85
APP-211ENST00000462267 MCM10Q7L590 875 aa20.39■□□□□ 0.85
APP-211ENST00000462267 RSPH6AQ9H0K4 717 aa20.39■□□□□ 0.85
APP-211ENST00000462267 CNOT7Q9UIV1 285 aaKnown RBP20.39■□□□□ 0.85
APP-211ENST00000462267 TRPA1O75762 1119 aa20.38■□□□□ 0.85
APP-211ENST00000462267 KIF23Q02241 960 aaPredicted RBP20.38■□□□□ 0.85
APP-211ENST00000462267 KIAA2012Q0VF49 1180 aa20.38■□□□□ 0.85
APP-211ENST00000462267 KIF6Q6ZMV9 814 aa20.38■□□□□ 0.85
APP-211ENST00000462267 CTU1Q7Z7A3 348 aaKnown RBP20.38■□□□□ 0.85
APP-211ENST00000462267 NGEFQ8N5V2 710 aa20.38■□□□□ 0.85
APP-211ENST00000462267 NLRP3Q96P20 1036 aa20.38■□□□□ 0.85
APP-211ENST00000462267 RNF186Q9NXI6 227 aa20.38■□□□□ 0.85
APP-211ENST00000462267 RAD17O75943 681 aa20.37■□□□□ 0.85
APP-211ENST00000462267 DPP8Q6V1X1 898 aaPredicted RBP20.37■□□□□ 0.85
APP-211ENST00000462267 C3orf67Q6ZVT6 689 aa20.37■□□□□ 0.85
APP-211ENST00000462267 C2orf69Q8N8R5 385 aa20.37■□□□□ 0.85
APP-211ENST00000462267 GBA2Q9HCG7 927 aaPredicted RBP20.37■□□□□ 0.85
APP-211ENST00000462267 CLSPNQ9HAW4 1339 aa20.36■□□□□ 0.85
APP-211ENST00000462267 HTATSF1O43719 755 aaKnown RBP20.36■□□□□ 0.85
APP-211ENST00000462267 NTSR2O95665 410 aa20.36■□□□□ 0.85
APP-211ENST00000462267 ZNF34Q8IZ26 560 aa20.36■□□□□ 0.85
APP-211ENST00000462267 NUP98P52948 1817 aa20.36■□□□□ 0.85
APP-211ENST00000462267 BBOX1O75936 387 aa20.35■□□□□ 0.85
APP-211ENST00000462267 ZNF157P51786 506 aaPredicted RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms